RNA–Protein interactions for RNA: ENST00000556607.1

SPTLC2-205, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 3

Gene SPTLC2, Length 460 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-205ENST00000556607 FAM83AQ86UY5 434 aa13.09□□□□□ -0.31
SPTLC2-205ENST00000556607 DZIP1Q86YF9 867 aaKnown RBP13.09□□□□□ -0.31
SPTLC2-205ENST00000556607 FTSJ3Q8IY81 847 aaKnown RBP13.09□□□□□ -0.31
SPTLC2-205ENST00000556607 ZGPATQ8N5A5 531 aaKnown RBP13.09□□□□□ -0.31
SPTLC2-205ENST00000556607 WRNIP1Q96S55 665 aa13.09□□□□□ -0.31
SPTLC2-205ENST00000556607 R3HDMLQ9H3Y0 253 aa13.09□□□□□ -0.31
SPTLC2-205ENST00000556607 CDC42EP5Q6NZY7 148 aa13.08□□□□□ -0.32
SPTLC2-205ENST00000556607 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.08□□□□□ -0.32
SPTLC2-205ENST00000556607 CNKSR2Q8WXI2 1034 aa13.08□□□□□ -0.32
SPTLC2-205ENST00000556607 XAGE2Q96GT9 111 aa13.08□□□□□ -0.32
SPTLC2-205ENST00000556607 USP40Q9NVE5 1235 aa13.08□□□□□ -0.32
SPTLC2-205ENST00000556607 DAGLAQ9Y4D2 1042 aa13.08□□□□□ -0.32
SPTLC2-205ENST00000556607 CCL15-CCL14A0A0B4J2E2 113 aa13.07□□□□□ -0.32
SPTLC2-205ENST00000556607 GTF2A2P52657 109 aa13.07□□□□□ -0.32
SPTLC2-205ENST00000556607 OS9Q13438 667 aaPredicted RBP13.07□□□□□ -0.32
SPTLC2-205ENST00000556607 MVPQ14764 893 aaKnown RBP13.07□□□□□ -0.32
SPTLC2-205ENST00000556607 CCL15Q16663 113 aa13.07□□□□□ -0.32
SPTLC2-205ENST00000556607 FKBP1CQ5VVH2 108 aa13.07□□□□□ -0.32
SPTLC2-205ENST00000556607 TMEM57Q8N5G2 664 aa13.07□□□□□ -0.32
SPTLC2-205ENST00000556607 FAM151AQ8WW52 585 aa13.07□□□□□ -0.32
SPTLC2-205ENST00000556607 ZKSCAN4Q969J2 545 aaPredicted RBP13.07□□□□□ -0.32
SPTLC2-205ENST00000556607 CFHR5Q9BXR6 569 aa13.07□□□□□ -0.32
SPTLC2-205ENST00000556607 ZNF341Q9BYN7 854 aa13.07□□□□□ -0.32
SPTLC2-205ENST00000556607 HPS5Q9UPZ3 1129 aa13.07□□□□□ -0.32
SPTLC2-205ENST00000556607 PNMA6EA0A0J9YXQ4 647 aa13.06□□□□□ -0.32
SPTLC2-205ENST00000556607 CRHR2Q13324 411 aa13.06□□□□□ -0.32
SPTLC2-205ENST00000556607 MTX1Q13505 466 aa13.06□□□□□ -0.32
SPTLC2-205ENST00000556607 TAF1CQ15572 869 aaPredicted RBP13.06□□□□□ -0.32
SPTLC2-205ENST00000556607 NOM1Q5C9Z4 860 aaKnown RBP13.06□□□□□ -0.32
SPTLC2-205ENST00000556607 SPTY2D1Q68D10 685 aaPredicted RBP13.06□□□□□ -0.32
SPTLC2-205ENST00000556607 ERICH6Q7L0X2 663 aa13.06□□□□□ -0.32
SPTLC2-205ENST00000556607 ITPRIPQ8IWB1 547 aa13.06□□□□□ -0.32
SPTLC2-205ENST00000556607 ZSCAN29Q8IWY8 852 aaPredicted RBP13.06□□□□□ -0.32
SPTLC2-205ENST00000556607 SLF2Q8IX21 1173 aa13.06□□□□□ -0.32
SPTLC2-205ENST00000556607 TRIM17Q9Y577 477 aa13.06□□□□□ -0.32
SPTLC2-205ENST00000556607 SALL1Q9NSC2 1324 aa13.06□□□□□ -0.32
SPTLC2-205ENST00000556607 WDHD1O75717 1129 aaPredicted RBP13.05□□□□□ -0.32
SPTLC2-205ENST00000556607 RGS19P49795 217 aa13.05□□□□□ -0.32
SPTLC2-205ENST00000556607 RASGRF1Q13972 1273 aa13.05□□□□□ -0.32
SPTLC2-205ENST00000556607 FBXO46Q6PJ61 603 aaPredicted RBP13.05□□□□□ -0.32
SPTLC2-205ENST00000556607 ERO1BQ86YB8 467 aa13.05□□□□□ -0.32
SPTLC2-205ENST00000556607 ERO1AQ96HE7 468 aa13.05□□□□□ -0.32
SPTLC2-205ENST00000556607 PTPN18Q99952 460 aa13.05□□□□□ -0.32
SPTLC2-205ENST00000556607 SPDYE5A6NIY4 337 aa13.04□□□□□ -0.32
SPTLC2-205ENST00000556607 INPP5BP32019 993 aa13.04□□□□□ -0.32
SPTLC2-205ENST00000556607 SP3Q02447 781 aa13.04□□□□□ -0.32
SPTLC2-205ENST00000556607 NFIAQ12857 509 aa13.04□□□□□ -0.32
SPTLC2-205ENST00000556607 CD99L2Q8TCZ2 262 aa13.04□□□□□ -0.32
SPTLC2-205ENST00000556607 BRI3BPQ8WY22 251 aa13.04□□□□□ -0.32
SPTLC2-205ENST00000556607 MS4A4AQ96JQ5 239 aa13.04□□□□□ -0.32
SPTLC2-205ENST00000556607 C1orf115Q9H7X2 142 aa13.04□□□□□ -0.32
SPTLC2-205ENST00000556607 ZFYVE28Q9HCC9 887 aa13.04□□□□□ -0.32
SPTLC2-205ENST00000556607 SNCAIPQ9Y6H5 919 aa13.04□□□□□ -0.32
SPTLC2-205ENST00000556607 RPAP1Q9BWH6 1393 aaPredicted RBP13.04□□□□□ -0.32
SPTLC2-205ENST00000556607 DOCK2Q92608 1830 aa13.04□□□□□ -0.32
SPTLC2-205ENST00000556607 TESPA1A2RU30 521 aaPredicted RBP13.03□□□□□ -0.32
SPTLC2-205ENST00000556607 CETPP11597 493 aa13.03□□□□□ -0.32
SPTLC2-205ENST00000556607 BTDP43251 543 aa13.03□□□□□ -0.32
SPTLC2-205ENST00000556607 RGS3P49796 1198 aa13.03□□□□□ -0.32
SPTLC2-205ENST00000556607 PICALMQ13492 652 aa13.03□□□□□ -0.32
SPTLC2-205ENST00000556607 RAI14Q9P0K7 980 aa13.03□□□□□ -0.32
SPTLC2-205ENST00000556607 FAM198AQ9UFP1 575 aa13.03□□□□□ -0.32
SPTLC2-205ENST00000556607 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.03□□□□□ -0.32
SPTLC2-205ENST00000556607 IRF6O14896 467 aa13.02□□□□□ -0.33
SPTLC2-205ENST00000556607 SURF6O75683 361 aaKnown RBP13.02□□□□□ -0.33
SPTLC2-205ENST00000556607 SNAPC2Q13487 334 aa13.02□□□□□ -0.33
SPTLC2-205ENST00000556607 TTC39AQ5SRH9 613 aa13.02□□□□□ -0.33
SPTLC2-205ENST00000556607 OTOP1Q7RTM1 612 aa13.02□□□□□ -0.33
SPTLC2-205ENST00000556607 FAM43AQ8N2R8 423 aa13.02□□□□□ -0.33
SPTLC2-205ENST00000556607 SPATA5Q8NB90 893 aa13.02□□□□□ -0.33
SPTLC2-205ENST00000556607 EFCC1Q9HA90 598 aa13.02□□□□□ -0.33
SPTLC2-205ENST00000556607 HMG20BQ9P0W2 317 aa13.02□□□□□ -0.33
SPTLC2-205ENST00000556607 LRP2BPQ9P2M1 347 aa13.02□□□□□ -0.33
SPTLC2-205ENST00000556607 ECM2O94769 699 aaPredicted RBP13.01□□□□□ -0.33
SPTLC2-205ENST00000556607 LDHCP07864 332 aa13.01□□□□□ -0.33
SPTLC2-205ENST00000556607 UQCRFS1P1P0C7P4 283 aa13.01□□□□□ -0.33
SPTLC2-205ENST00000556607 GSTO1P78417 241 aa13.01□□□□□ -0.33
SPTLC2-205ENST00000556607 ATP8B2P98198 1209 aa13.01□□□□□ -0.33
SPTLC2-205ENST00000556607 MECOMQ03112 1051 aa13.01□□□□□ -0.33
SPTLC2-205ENST00000556607 PPATQ06203 517 aa13.01□□□□□ -0.33
SPTLC2-205ENST00000556607 PPIL2Q13356 520 aa13.01□□□□□ -0.33
SPTLC2-205ENST00000556607 ARHGEF6Q15052 776 aa13.01□□□□□ -0.33
SPTLC2-205ENST00000556607 CCDC158Q5M9N0 1113 aa13.01□□□□□ -0.33
SPTLC2-205ENST00000556607 PI16Q6UXB8 463 aa13.01□□□□□ -0.33
SPTLC2-205ENST00000556607 TBC1D9Q6ZT07 1266 aa13.01□□□□□ -0.33
SPTLC2-205ENST00000556607 ZFPM1Q8IX07 1006 aa13.01□□□□□ -0.33
SPTLC2-205ENST00000556607 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.01□□□□□ -0.33
SPTLC2-205ENST00000556607 NOL10Q9BSC4 688 aaKnown RBP13.01□□□□□ -0.33
SPTLC2-205ENST00000556607 MROH7-TTC4A0A0A0MT08 1334 aa13.01□□□□□ -0.33
SPTLC2-205ENST00000556607 PDS5AQ29RF7 1337 aaKnown RBP13.01□□□□□ -0.33
SPTLC2-205ENST00000556607 GAKO14976 1311 aa13□□□□□ -0.33
SPTLC2-205ENST00000556607 ZBED9Q6R2W3 1325 aa13□□□□□ -0.33
SPTLC2-205ENST00000556607 BTBD19C9JJ37 291 aa13□□□□□ -0.33
SPTLC2-205ENST00000556607 ENTPD3O75355 529 aa13□□□□□ -0.33
SPTLC2-205ENST00000556607 KIF22Q14807 665 aa13□□□□□ -0.33
SPTLC2-205ENST00000556607 IDI2Q9BXS1 227 aa13□□□□□ -0.33
SPTLC2-205ENST00000556607 RLBP1P12271 317 aa12.99□□□□□ -0.33
SPTLC2-205ENST00000556607 ARID4AP29374 1257 aaPredicted RBP12.99□□□□□ -0.33
SPTLC2-205ENST00000556607 MCAMP43121 646 aa12.99□□□□□ -0.33
SPTLC2-205ENST00000556607 POLA2Q14181 598 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms