RNA–Protein interactions for RNA: ENST00000556217.5

SUPT16H-205, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 1,027 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-205ENST00000556217 APOBEC3HQ6NTF7 200 aaKnown RBP19.36■□□□□ 0.69
SUPT16H-205ENST00000556217 HHIPL2Q6UWX4 724 aa19.36■□□□□ 0.69
SUPT16H-205ENST00000556217 CHRDL2Q6WN34 429 aa19.36■□□□□ 0.69
SUPT16H-205ENST00000556217 ZKSCAN4Q969J2 545 aaPredicted RBP19.36■□□□□ 0.69
SUPT16H-205ENST00000556217 CUL9Q8IWT3 2517 aa19.35■□□□□ 0.69
SUPT16H-205ENST00000556217 IRF6O14896 467 aa19.35■□□□□ 0.69
SUPT16H-205ENST00000556217 MRPL50Q8N5N7 158 aaKnown RBP19.35■□□□□ 0.69
SUPT16H-205ENST00000556217 WDR66Q8TBY9 1149 aa19.35■□□□□ 0.69
SUPT16H-205ENST00000556217 ZNF341Q9BYN7 854 aa19.35■□□□□ 0.69
SUPT16H-205ENST00000556217 BTBD19C9JJ37 291 aa19.34■□□□□ 0.69
SUPT16H-205ENST00000556217 SLC5A1P13866 664 aa19.34■□□□□ 0.69
SUPT16H-205ENST00000556217 PRMT2P55345 433 aa19.34■□□□□ 0.69
SUPT16H-205ENST00000556217 LACTBP83111 547 aaPredicted RBP19.34■□□□□ 0.69
SUPT16H-205ENST00000556217 PPATQ06203 517 aa19.34■□□□□ 0.69
SUPT16H-205ENST00000556217 RANBP2P49792 3224 aaKnown RBP19.34■□□□□ 0.69
SUPT16H-205ENST00000556217 ZEB1P37275 1124 aaPredicted RBP19.33■□□□□ 0.68
SUPT16H-205ENST00000556217 KLHDC4Q8TBB5 520 aa19.33■□□□□ 0.68
SUPT16H-205ENST00000556217 MYCP01106 439 aaPredicted RBP19.32■□□□□ 0.68
SUPT16H-205ENST00000556217 FGFR2P21802 821 aa19.32■□□□□ 0.68
SUPT16H-205ENST00000556217 FAM151AQ8WW52 585 aa19.32■□□□□ 0.68
SUPT16H-205ENST00000556217 LPIN2Q92539 896 aa19.32■□□□□ 0.68
SUPT16H-205ENST00000556217 USP44Q9H0E7 712 aa19.32■□□□□ 0.68
SUPT16H-205ENST00000556217 RBM27Q9P2N5 1060 aaKnown RBP19.32■□□□□ 0.68
SUPT16H-205ENST00000556217 ZSWIM8A7E2V4 1837 aa19.32■□□□□ 0.68
SUPT16H-205ENST00000556217 ZNF521Q96K83 1311 aa19.31■□□□□ 0.68
SUPT16H-205ENST00000556217 EYA2O00167 538 aa19.31■□□□□ 0.68
SUPT16H-205ENST00000556217 MIGA2Q7L4E1 593 aa19.31■□□□□ 0.68
SUPT16H-205ENST00000556217 DPF3Q92784 378 aa19.31■□□□□ 0.68
SUPT16H-205ENST00000556217 ARHGAP39Q9C0H5 1083 aa19.31■□□□□ 0.68
SUPT16H-205ENST00000556217 ANKRD23Q86SG2 305 aa19.3■□□□□ 0.68
SUPT16H-205ENST00000556217 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.3■□□□□ 0.68
SUPT16H-205ENST00000556217 SH3TC2Q8TF17 1288 aa19.3■□□□□ 0.68
SUPT16H-205ENST00000556217 GNL3LQ9NVN8 582 aaKnown RBP19.3■□□□□ 0.68
SUPT16H-205ENST00000556217 INPP5BP32019 993 aa19.29■□□□□ 0.68
SUPT16H-205ENST00000556217 C17orf99Q6UX52 265 aa19.29■□□□□ 0.68
SUPT16H-205ENST00000556217 E9PSI1 815 aa19.28■□□□□ 0.68
SUPT16H-205ENST00000556217 HOXD10P28358 340 aa19.28■□□□□ 0.68
SUPT16H-205ENST00000556217 SSH1Q8WYL5 1049 aa19.28■□□□□ 0.68
SUPT16H-205ENST00000556217 ZNF112Q9UJU3 913 aa19.28■□□□□ 0.68
SUPT16H-205ENST00000556217 DAGLAQ9Y4D2 1042 aa19.28■□□□□ 0.68
SUPT16H-205ENST00000556217 ZNF316A6NFI3 1004 aaPredicted RBP19.27■□□□□ 0.68
SUPT16H-205ENST00000556217 PDHXO00330 501 aa19.27■□□□□ 0.68
SUPT16H-205ENST00000556217 LDHBP07195 334 aaKnown RBP19.27■□□□□ 0.68
SUPT16H-205ENST00000556217 RFX5P48382 616 aaPredicted RBP19.27■□□□□ 0.68
SUPT16H-205ENST00000556217 TCP10Q12799 353 aa19.27■□□□□ 0.68
SUPT16H-205ENST00000556217 CDC42EP5Q6NZY7 148 aa19.27■□□□□ 0.68
SUPT16H-205ENST00000556217 CPA4Q9UI42 421 aa19.27■□□□□ 0.68
SUPT16H-205ENST00000556217 FBXO3Q9UK99 471 aa19.27■□□□□ 0.68
SUPT16H-205ENST00000556217 KCNH4Q9UQ05 1017 aa19.27■□□□□ 0.68
SUPT16H-205ENST00000556217 PSMC4P43686 418 aa19.26■□□□□ 0.67
SUPT16H-205ENST00000556217 DIXDC1Q155Q3 683 aa19.26■□□□□ 0.67
SUPT16H-205ENST00000556217 ATP2B3Q16720 1220 aa19.26■□□□□ 0.67
SUPT16H-205ENST00000556217 NOL9Q5SY16 702 aaKnown RBP19.26■□□□□ 0.67
SUPT16H-205ENST00000556217 SRRDQ9UH36 339 aa19.26■□□□□ 0.67
SUPT16H-205ENST00000556217 COL6A3P12111 3177 aa19.26■□□□□ 0.67
SUPT16H-205ENST00000556217 SEMA3EO15041 775 aa19.25■□□□□ 0.67
SUPT16H-205ENST00000556217 CIAO1O76071 339 aa19.25■□□□□ 0.67
SUPT16H-205ENST00000556217 FMNL1O95466 1100 aaPredicted RBP19.25■□□□□ 0.67
SUPT16H-205ENST00000556217 ATG9AQ7Z3C6 839 aa19.25■□□□□ 0.67
SUPT16H-205ENST00000556217 RAET1EQ8TD07 263 aa19.25■□□□□ 0.67
SUPT16H-205ENST00000556217 TRIM47Q96LD4 638 aa19.25■□□□□ 0.67
SUPT16H-205ENST00000556217 PARK7Q99497 189 aaKnown RBP19.25■□□□□ 0.67
SUPT16H-205ENST00000556217 HTATIP2Q9BUP3 242 aa19.25■□□□□ 0.67
SUPT16H-205ENST00000556217 USP40Q9NVE5 1235 aa19.25■□□□□ 0.67
SUPT16H-205ENST00000556217 CEP126Q9P2H0 1117 aa19.25■□□□□ 0.67
SUPT16H-205ENST00000556217 DOCK2Q92608 1830 aa19.25■□□□□ 0.67
SUPT16H-205ENST00000556217 SALL1Q9NSC2 1324 aa19.25■□□□□ 0.67
SUPT16H-205ENST00000556217 MYH2Q9UKX2 1941 aa19.24■□□□□ 0.67
SUPT16H-205ENST00000556217 ECM2O94769 699 aaPredicted RBP19.24■□□□□ 0.67
SUPT16H-205ENST00000556217 UBTFL1P0CB47 393 aaPredicted RBP19.24■□□□□ 0.67
SUPT16H-205ENST00000556217 PRDX5P30044 214 aa19.24■□□□□ 0.67
SUPT16H-205ENST00000556217 NFIAQ12857 509 aa19.24■□□□□ 0.67
SUPT16H-205ENST00000556217 ALDH1L2Q3SY69 923 aa19.24■□□□□ 0.67
SUPT16H-205ENST00000556217 NKX2-3Q8TAU0 364 aa19.24■□□□□ 0.67
SUPT16H-205ENST00000556217 SIL1Q9H173 461 aa19.24■□□□□ 0.67
SUPT16H-205ENST00000556217 DENND2AQ9ULE3 1009 aa19.24■□□□□ 0.67
SUPT16H-205ENST00000556217 HDAC5Q9UQL6 1122 aa19.24■□□□□ 0.67
SUPT16H-205ENST00000556217 NR2E3Q9Y5X4 410 aa19.24■□□□□ 0.67
SUPT16H-205ENST00000556217 ADGRA2Q96PE1 1338 aa19.24■□□□□ 0.67
SUPT16H-205ENST00000556217 MGAMO43451 1857 aa19.23■□□□□ 0.67
SUPT16H-205ENST00000556217 CXCL11O14625 94 aa19.23■□□□□ 0.67
SUPT16H-205ENST00000556217 OSBPP22059 807 aa19.23■□□□□ 0.67
SUPT16H-205ENST00000556217 ZGPATQ8N5A5 531 aaKnown RBP19.23■□□□□ 0.67
SUPT16H-205ENST00000556217 PRO3102Q9H379 93 aa19.23■□□□□ 0.67
SUPT16H-205ENST00000556217 FAM198AQ9UFP1 575 aa19.23■□□□□ 0.67
SUPT16H-205ENST00000556217 MYPNQ86TC9 1320 aa19.23■□□□□ 0.67
SUPT16H-205ENST00000556217 GRK4P32298 578 aa19.22■□□□□ 0.67
SUPT16H-205ENST00000556217 SHISA4Q96DD7 197 aa19.22■□□□□ 0.67
SUPT16H-205ENST00000556217 PICK1Q9NRD5 415 aa19.22■□□□□ 0.67
SUPT16H-205ENST00000556217 SMC4Q9NTJ3 1288 aa19.22■□□□□ 0.67
SUPT16H-205ENST00000556217 CTGFP29279 349 aa19.21■□□□□ 0.67
SUPT16H-205ENST00000556217 IL15P40933 162 aaPredicted RBP19.21■□□□□ 0.67
SUPT16H-205ENST00000556217 FCGRTP55899 365 aa19.21■□□□□ 0.67
SUPT16H-205ENST00000556217 MOGSQ13724 837 aa19.21■□□□□ 0.67
SUPT16H-205ENST00000556217 FASTKD5Q7L8L6 764 aaKnown RBP19.21■□□□□ 0.67
SUPT16H-205ENST00000556217 BIN2Q9UBW5 565 aaPredicted RBP19.21■□□□□ 0.67
SUPT16H-205ENST00000556217 A0A1W2PPC1 479 aa19.2■□□□□ 0.66
SUPT16H-205ENST00000556217 ENTPD3O75355 529 aa19.2■□□□□ 0.66
SUPT16H-205ENST00000556217 MNX1P50219 401 aaPredicted RBP19.2■□□□□ 0.66
SUPT16H-205ENST00000556217 UBXN2AP68543 259 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 91.9 ms