RNA–Protein interactions for RNA: ENST00000556162.5

SNX6-206, Transcript of sorting nexin 6, humanhuman

TSL 2

Gene SNX6, Length 1,855 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-206ENST00000556162 TMOD2Q9NZR1 351 aa17.12■□□□□ 0.33
SNX6-206ENST00000556162 ZNF70Q9UC06 446 aaPredicted RBP17.12■□□□□ 0.33
SNX6-206ENST00000556162 PITPNM2Q9BZ72 1349 aa17.11■□□□□ 0.33
SNX6-206ENST00000556162 ZNF532Q9HCE3 1301 aa17.11■□□□□ 0.33
SNX6-206ENST00000556162 ADD2P35612 726 aa17.11■□□□□ 0.33
SNX6-206ENST00000556162 CDC37L1Q7L3B6 337 aa17.11■□□□□ 0.33
SNX6-206ENST00000556162 SULF1Q8IWU6 871 aa17.11■□□□□ 0.33
SNX6-206ENST00000556162 ZFYP08048 801 aaPredicted RBP17.1■□□□□ 0.33
SNX6-206ENST00000556162 UBE3CQ15386 1083 aa17.1■□□□□ 0.33
SNX6-206ENST00000556162 TTC22Q5TAA0 569 aa17.1■□□□□ 0.33
SNX6-206ENST00000556162 CDC42EP5Q6NZY7 148 aa17.1■□□□□ 0.33
SNX6-206ENST00000556162 KRT26Q7Z3Y9 468 aa17.1■□□□□ 0.33
SNX6-206ENST00000556162 ADGRA1Q86SQ6 560 aa17.1■□□□□ 0.33
SNX6-206ENST00000556162 APOBEC3FQ8IUX4 373 aaKnown RBP17.1■□□□□ 0.33
SNX6-206ENST00000556162 AATFQ9NY61 560 aaKnown RBP eCLIP17.1■□□□□ 0.33
SNX6-206ENST00000556162 RGS3P49796 1198 aa17.1■□□□□ 0.33
SNX6-206ENST00000556162 PPP4CP60510 307 aa17.1■□□□□ 0.33
SNX6-206ENST00000556162 SKAP1Q86WV1 359 aa17.1■□□□□ 0.33
SNX6-206ENST00000556162 MYH2Q9UKX2 1941 aa17.09■□□□□ 0.33
SNX6-206ENST00000556162 MYO5AQ9Y4I1 1855 aaKnown RBP17.09■□□□□ 0.33
SNX6-206ENST00000556162 TCRBV5S4A2TA0A5A2 114 aa17.09■□□□□ 0.33
SNX6-206ENST00000556162 RNF113AO15541 343 aaKnown RBP17.09■□□□□ 0.33
SNX6-206ENST00000556162 PLCG2P16885 1265 aa17.09■□□□□ 0.33
SNX6-206ENST00000556162 FSTL1Q12841 308 aa17.09■□□□□ 0.33
SNX6-206ENST00000556162 TNFAIP1Q13829 316 aa17.09■□□□□ 0.33
SNX6-206ENST00000556162 USP48Q86UV5 1035 aa17.09■□□□□ 0.33
SNX6-206ENST00000556162 CERS3Q8IU89 383 aa17.09■□□□□ 0.33
SNX6-206ENST00000556162 MIGA1Q8NAN2 632 aa17.09■□□□□ 0.33
SNX6-206ENST00000556162 DOCK2Q92608 1830 aa17.08■□□□□ 0.33
SNX6-206ENST00000556162 TICAM2Q86XR7 235 aa17.08■□□□□ 0.33
SNX6-206ENST00000556162 GLIS2Q9BZE0 524 aaPredicted RBP17.08■□□□□ 0.33
SNX6-206ENST00000556162 SCAF8Q9UPN6 1271 aaKnown RBP17.08■□□□□ 0.33
SNX6-206ENST00000556162 ADAMTSL1Q8N6G6 1762 aa17.08■□□□□ 0.32
SNX6-206ENST00000556162 TCP10L2B9ZVM9 353 aa17.07■□□□□ 0.32
SNX6-206ENST00000556162 TNNI2P48788 182 aa17.07■□□□□ 0.32
SNX6-206ENST00000556162 CACNB3P54284 484 aa17.07■□□□□ 0.32
SNX6-206ENST00000556162 SLFNL1Q499Z3 407 aa17.07■□□□□ 0.32
SNX6-206ENST00000556162 FKBP1CQ5VVH2 108 aa17.07■□□□□ 0.32
SNX6-206ENST00000556162 MAGEB6P1A0A0J9YX57 407 aa17.07■□□□□ 0.32
SNX6-206ENST00000556162 CHGBP05060 677 aa17.07■□□□□ 0.32
SNX6-206ENST00000556162 GSPT1P15170 499 aaKnown RBP17.07■□□□□ 0.32
SNX6-206ENST00000556162 RHBDL3P58872 404 aa17.07■□□□□ 0.32
SNX6-206ENST00000556162 DEFB129Q9H1M3 183 aa17.07■□□□□ 0.32
SNX6-206ENST00000556162 MAST2Q6P0Q8 1798 aa17.07■□□□□ 0.32
SNX6-206ENST00000556162 ADM5C9JUS6 153 aa17.06■□□□□ 0.32
SNX6-206ENST00000556162 ITGBL1O95965 494 aaPredicted RBP17.06■□□□□ 0.32
SNX6-206ENST00000556162 SDSP20132 328 aa17.06■□□□□ 0.32
SNX6-206ENST00000556162 DYNLL1P63167 89 aaKnown RBP17.06■□□□□ 0.32
SNX6-206ENST00000556162 TEX11Q8IYF3 940 aa17.06■□□□□ 0.32
SNX6-206ENST00000556162 SH3RF3Q8TEJ3 882 aaPredicted RBP17.06■□□□□ 0.32
SNX6-206ENST00000556162 APPBP2Q92624 585 aa17.06■□□□□ 0.32
SNX6-206ENST00000556162 GTF3C3Q9Y5Q9 886 aa17.06■□□□□ 0.32
SNX6-206ENST00000556162 RASA3Q14644 834 aa17.05■□□□□ 0.32
SNX6-206ENST00000556162 RIOK1Q9BRS2 568 aaKnown RBP17.05■□□□□ 0.32
SNX6-206ENST00000556162 IDI2Q9BXS1 227 aa17.05■□□□□ 0.32
SNX6-206ENST00000556162 NFIAQ12857 509 aa17.05■□□□□ 0.32
SNX6-206ENST00000556162 FAM83AQ86UY5 434 aa17.05■□□□□ 0.32
SNX6-206ENST00000556162 AIDAQ96BJ3 306 aa17.05■□□□□ 0.32
SNX6-206ENST00000556162 PUS7LQ9H0K6 701 aaKnown RBP17.05■□□□□ 0.32
SNX6-206ENST00000556162 PPP2R3BQ9Y5P8 575 aa17.05■□□□□ 0.32
SNX6-206ENST00000556162 TRAF5O00463 557 aa17.04■□□□□ 0.32
SNX6-206ENST00000556162 WDHD1O75717 1129 aaPredicted RBP17.04■□□□□ 0.32
SNX6-206ENST00000556162 OSBP2Q969R2 916 aa17.04■□□□□ 0.32
SNX6-206ENST00000556162 HIP1O00291 1037 aa17.03■□□□□ 0.32
SNX6-206ENST00000556162 MBD4O95243 580 aa17.03■□□□□ 0.32
SNX6-206ENST00000556162 TCP10Q12799 353 aa17.03■□□□□ 0.32
SNX6-206ENST00000556162 PICALMQ13492 652 aa17.03■□□□□ 0.32
SNX6-206ENST00000556162 ZMYM1Q5SVZ6 1142 aa17.03■□□□□ 0.32
SNX6-206ENST00000556162 DLK2Q6UY11 383 aa17.03■□□□□ 0.32
SNX6-206ENST00000556162 TGFBRAP1Q8WUH2 860 aa17.03■□□□□ 0.32
SNX6-206ENST00000556162 FAM151AQ8WW52 585 aa17.03■□□□□ 0.32
SNX6-206ENST00000556162 ARMT1Q9H993 441 aa17.03■□□□□ 0.32
SNX6-206ENST00000556162 FAM198AQ9UFP1 575 aa17.03■□□□□ 0.32
SNX6-206ENST00000556162 POLR2AP24928 1970 aaKnown RBP17.03■□□□□ 0.32
SNX6-206ENST00000556162 RFX7Q2KHR2 1363 aa17.03■□□□□ 0.32
SNX6-206ENST00000556162 ENTPD3O75355 529 aa17.03■□□□□ 0.32
SNX6-206ENST00000556162 NPM3O75607 178 aaKnown RBP17.03■□□□□ 0.32
SNX6-206ENST00000556162 PRAMEF18Q5VWM3 479 aa17.03■□□□□ 0.32
SNX6-206ENST00000556162 LCORLQ8N3X6 602 aa17.03■□□□□ 0.32
SNX6-206ENST00000556162 CDCA5Q96FF9 252 aa17.03■□□□□ 0.32
SNX6-206ENST00000556162 CRNKL1Q9BZJ0 848 aaKnown RBP17.03■□□□□ 0.32
SNX6-206ENST00000556162 TMEM39BQ9GZU3 492 aa17.03■□□□□ 0.32
SNX6-206ENST00000556162 ECM29Q5VYK3 1845 aa17.03■□□□□ 0.32
SNX6-206ENST00000556162 USP5P45974 858 aa17.02■□□□□ 0.32
SNX6-206ENST00000556162 BMP2KLQ5H9B9 411 aa17.02■□□□□ 0.32
SNX6-206ENST00000556162 HELLSQ9NRZ9 838 aa17.02■□□□□ 0.32
SNX6-206ENST00000556162 DIAPH3Q9NSV4 1193 aa17.02■□□□□ 0.32
SNX6-206ENST00000556162 CNTNAP1P78357 1384 aa17.02■□□□□ 0.31
SNX6-206ENST00000556162 FMR1Q06787 632 aaKnown RBP eCLIP17.01■□□□□ 0.31
SNX6-206ENST00000556162 SUPT20HL1Q3ZLR7 823 aa17.01■□□□□ 0.31
SNX6-206ENST00000556162 SEC62Q99442 399 aaKnown RBP17.01■□□□□ 0.31
SNX6-206ENST00000556162 DDX4Q9NQI0 724 aaKnown RBP17.01■□□□□ 0.31
SNX6-206ENST00000556162 PASKQ96RG2 1323 aa17.01■□□□□ 0.31
SNX6-206ENST00000556162 MYH7P12883 1935 aa17.01■□□□□ 0.31
SNX6-206ENST00000556162 NF2P35240 595 aa17.01■□□□□ 0.31
SNX6-206ENST00000556162 MAPKAPK5Q8IW41 473 aa17.01■□□□□ 0.31
SNX6-206ENST00000556162 ZSCAN29Q8IWY8 852 aaPredicted RBP17.01■□□□□ 0.31
SNX6-206ENST00000556162 FAM227BQ96M60 508 aa17.01■□□□□ 0.31
SNX6-206ENST00000556162 STRBPQ96SI9 672 aaKnown RBP17.01■□□□□ 0.31
SNX6-206ENST00000556162 ZNF408Q9H9D4 720 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms