RNA–Protein interactions for RNA: ENST00000555462.5

PPP4R3A-208, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 1 (best) BASIC

Gene PPP4R3A, Length 3,236 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-208ENST00000555462 SALL1Q9NSC2 1324 aa19.66■□□□□ 0.74
PPP4R3A-208ENST00000555462 LRP10Q7Z4F1 713 aa19.66■□□□□ 0.74
PPP4R3A-208ENST00000555462 STRN4Q9NRL3 753 aa19.66■□□□□ 0.74
PPP4R3A-208ENST00000555462 PHACTR2O75167 634 aa19.65■□□□□ 0.74
PPP4R3A-208ENST00000555462 NR5A1Q13285 461 aa19.65■□□□□ 0.74
PPP4R3A-208ENST00000555462 PLCD3Q8N3E9 789 aa19.65■□□□□ 0.74
PPP4R3A-208ENST00000555462 NCOA7Q8NI08 942 aa19.65■□□□□ 0.74
PPP4R3A-208ENST00000555462 TOPAZ1Q8N9V7 1692 aa19.65■□□□□ 0.74
PPP4R3A-208ENST00000555462 LRRC37A3O60309 1634 aa19.65■□□□□ 0.74
PPP4R3A-208ENST00000555462 SH3TC1Q8TE82 1336 aa19.65■□□□□ 0.74
PPP4R3A-208ENST00000555462 POLR2DO15514 142 aaKnown RBP19.65■□□□□ 0.74
PPP4R3A-208ENST00000555462 BMP6P22004 513 aa19.65■□□□□ 0.74
PPP4R3A-208ENST00000555462 METTL24Q5JXM2 366 aa19.65■□□□□ 0.74
PPP4R3A-208ENST00000555462 PLBD2Q8NHP8 589 aa19.65■□□□□ 0.74
PPP4R3A-208ENST00000555462 OSBPL5Q9H0X9 879 aaPredicted RBP19.65■□□□□ 0.74
PPP4R3A-208ENST00000555462 IL15P40933 162 aaPredicted RBP19.64■□□□□ 0.74
PPP4R3A-208ENST00000555462 FMR1Q06787 632 aaKnown RBP eCLIP19.64■□□□□ 0.745e-7■■■■□ 19.4
PPP4R3A-208ENST00000555462 RABL6Q3YEC7 729 aaPredicted RBP19.64■□□□□ 0.74
PPP4R3A-208ENST00000555462 SUGCTQ9HAC7 445 aa19.64■□□□□ 0.74
PPP4R3A-208ENST00000555462 PDIA4P13667 645 aaKnown RBP19.64■□□□□ 0.73
PPP4R3A-208ENST00000555462 CASP7P55210 303 aa19.64■□□□□ 0.73
PPP4R3A-208ENST00000555462 HNRNPH2P55795 449 aaKnown RBP19.64■□□□□ 0.73
PPP4R3A-208ENST00000555462 GABPB1Q06547 395 aaPredicted RBP19.64■□□□□ 0.73
PPP4R3A-208ENST00000555462 MCM6Q14566 821 aa19.64■□□□□ 0.73
PPP4R3A-208ENST00000555462 OLFM4Q6UX06 510 aa19.64■□□□□ 0.73
PPP4R3A-208ENST00000555462 METTL16Q86W50 562 aaKnown RBP19.64■□□□□ 0.73
PPP4R3A-208ENST00000555462 ANKLE2Q86XL3 938 aa19.64■□□□□ 0.73
PPP4R3A-208ENST00000555462 ANKRD65E5RJM6 399 aa19.64■□□□□ 0.73
PPP4R3A-208ENST00000555462 BMS1Q14692 1282 aaKnown RBP19.64■□□□□ 0.73
PPP4R3A-208ENST00000555462 CCDC150Q8NCX0 1101 aa19.64■□□□□ 0.73
PPP4R3A-208ENST00000555462 FAM205CA6NFA0 338 aa19.63■□□□□ 0.73
PPP4R3A-208ENST00000555462 SASH3O75995 380 aa19.63■□□□□ 0.73
PPP4R3A-208ENST00000555462 SEC31BQ9NQW1 1179 aa19.63■□□□□ 0.73
PPP4R3A-208ENST00000555462 NFE2L3Q9Y4A8 694 aa19.63■□□□□ 0.73
PPP4R3A-208ENST00000555462 KDM6AO15550 1401 aaPredicted RBP19.63■□□□□ 0.73
PPP4R3A-208ENST00000555462 MYL5Q02045 173 aa19.63■□□□□ 0.73
PPP4R3A-208ENST00000555462 CNNM1Q9NRU3 951 aa19.63■□□□□ 0.73
PPP4R3A-208ENST00000555462 INTS13Q9NVM9 706 aa19.63■□□□□ 0.73
PPP4R3A-208ENST00000555462 LDHAL6AQ6ZMR3 332 aa19.63■□□□□ 0.73
PPP4R3A-208ENST00000555462 CCDC12Q8WUD4 166 aaPredicted RBP19.63■□□□□ 0.73
PPP4R3A-208ENST00000555462 KCNH3Q9ULD8 1083 aa19.63■□□□□ 0.73
PPP4R3A-208ENST00000555462 MAPK8IP1Q9UQF2 711 aa19.63■□□□□ 0.73
PPP4R3A-208ENST00000555462 HEG1Q9ULI3 1381 aa19.62■□□□□ 0.73
PPP4R3A-208ENST00000555462 PRKAB2O43741 272 aa19.62■□□□□ 0.73
PPP4R3A-208ENST00000555462 TRIM65Q6PJ69 517 aa19.62■□□□□ 0.73
PPP4R3A-208ENST00000555462 SERTAD1Q9UHV2 236 aa19.62■□□□□ 0.73
PPP4R3A-208ENST00000555462 PPP2R2CQ9Y2T4 447 aa19.62■□□□□ 0.73
PPP4R3A-208ENST00000555462 LTN1O94822 1766 aa19.62■□□□□ 0.73
PPP4R3A-208ENST00000555462 SOWAHDA6NJG2 315 aa19.62■□□□□ 0.73
PPP4R3A-208ENST00000555462 MB21D2Q8IYB1 491 aaPredicted RBP19.62■□□□□ 0.73
PPP4R3A-208ENST00000555462 MIGA1Q8NAN2 632 aa19.62■□□□□ 0.73
PPP4R3A-208ENST00000555462 GOLGA8AA7E2F4 631 aa19.61■□□□□ 0.73
PPP4R3A-208ENST00000555462 ABL1P00519 1130 aa19.61■□□□□ 0.73
PPP4R3A-208ENST00000555462 MCAMP43121 646 aa19.61■□□□□ 0.73
PPP4R3A-208ENST00000555462 TMEM67Q5HYA8 995 aa19.61■□□□□ 0.73
PPP4R3A-208ENST00000555462 DHX58Q96C10 678 aa19.61■□□□□ 0.73
PPP4R3A-208ENST00000555462 GDAP1L1Q96MZ0 367 aa19.61■□□□□ 0.73
PPP4R3A-208ENST00000555462 WWC3Q9ULE0 1092 aa19.61■□□□□ 0.73
PPP4R3A-208ENST00000555462 MTMR7Q9Y216 660 aa19.61■□□□□ 0.73
PPP4R3A-208ENST00000555462 PES1O00541 588 aaKnown RBP19.61■□□□□ 0.73
PPP4R3A-208ENST00000555462 TEX33O43247 280 aa19.61■□□□□ 0.73
PPP4R3A-208ENST00000555462 DHX16O60231 1041 aaKnown RBP19.61■□□□□ 0.73
PPP4R3A-208ENST00000555462 CMA1P23946 247 aa19.61■□□□□ 0.73
PPP4R3A-208ENST00000555462 IARSP41252 1262 aaKnown RBP19.61■□□□□ 0.73
PPP4R3A-208ENST00000555462 TRIM29Q14134 588 aa19.61■□□□□ 0.73
PPP4R3A-208ENST00000555462 POLR3EQ9NVU0 708 aa19.61■□□□□ 0.73
PPP4R3A-208ENST00000555462 CASQ1P31415 396 aa19.61■□□□□ 0.73
PPP4R3A-208ENST00000555462 IRX5P78411 483 aaPredicted RBP19.61■□□□□ 0.73
PPP4R3A-208ENST00000555462 SLC39A14Q15043 492 aa19.61■□□□□ 0.73
PPP4R3A-208ENST00000555462 NBPF3Q9H094 633 aa19.61■□□□□ 0.73
PPP4R3A-208ENST00000555462 H7C1W4 665 aa19.6■□□□□ 0.73
PPP4R3A-208ENST00000555462 IFIT3O14879 490 aaKnown RBP19.6■□□□□ 0.73
PPP4R3A-208ENST00000555462 RANBP6O60518 1105 aaKnown RBP19.6■□□□□ 0.73
PPP4R3A-208ENST00000555462 RHOXF2BP0C7M4 288 aa19.6■□□□□ 0.73
PPP4R3A-208ENST00000555462 REXO1L1PQ8IX06 675 aa19.6■□□□□ 0.73
PPP4R3A-208ENST00000555462 SMARCE1Q969G3 411 aa19.6■□□□□ 0.73
PPP4R3A-208ENST00000555462 BAG1Q99933 345 aaPredicted RBP19.6■□□□□ 0.73
PPP4R3A-208ENST00000555462 RHOXF2Q9BQY4 288 aa19.6■□□□□ 0.73
PPP4R3A-208ENST00000555462 ANKARQ7Z5J8 1434 aa19.6■□□□□ 0.73
PPP4R3A-208ENST00000555462 VWA3AA6NCI4 1184 aa19.6■□□□□ 0.73
PPP4R3A-208ENST00000555462 OAS2P29728 719 aaKnown RBP19.6■□□□□ 0.73
PPP4R3A-208ENST00000555462 SYCP1Q15431 976 aa19.6■□□□□ 0.73
PPP4R3A-208ENST00000555462 CCDC102BQ68D86 513 aa19.6■□□□□ 0.73
PPP4R3A-208ENST00000555462 TOM1L2Q6ZVM7 507 aa19.6■□□□□ 0.73
PPP4R3A-208ENST00000555462 OXER1Q8TDS5 423 aa19.6■□□□□ 0.73
PPP4R3A-208ENST00000555462 A0A1W2PQ27 194 aa19.59■□□□□ 0.73
PPP4R3A-208ENST00000555462 A0A1W2PQ64 194 aa19.59■□□□□ 0.73
PPP4R3A-208ENST00000555462 A0A1W2PQD8 194 aa19.59■□□□□ 0.73
PPP4R3A-208ENST00000555462 PRDM1O75626 825 aa19.59■□□□□ 0.73
PPP4R3A-208ENST00000555462 H2AFXP16104 143 aaPredicted RBP19.59■□□□□ 0.73
PPP4R3A-208ENST00000555462 PIH1D3Q9NQM4 214 aaKnown RBP19.59■□□□□ 0.73
PPP4R3A-208ENST00000555462 JCADQ9P266 1359 aa19.59■□□□□ 0.73
PPP4R3A-208ENST00000555462 CDC25AP30304 524 aa19.59■□□□□ 0.73
PPP4R3A-208ENST00000555462 PLEKHA4Q9H4M7 779 aa19.59■□□□□ 0.73
PPP4R3A-208ENST00000555462 TFR2Q9UP52 801 aa19.59■□□□□ 0.73
PPP4R3A-208ENST00000555462 PARP3Q9Y6F1 533 aa19.59■□□□□ 0.73
PPP4R3A-208ENST00000555462 YEATS4O95619 227 aa19.59■□□□□ 0.73
PPP4R3A-208ENST00000555462 PHKA1P46020 1223 aa19.59■□□□□ 0.73
PPP4R3A-208ENST00000555462 ARMT1Q9H993 441 aa19.59■□□□□ 0.73
PPP4R3A-208ENST00000555462 PCDHB6Q9Y5E3 794 aa19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms