RNA–Protein interactions for RNA: ENST00000553612.5

GTF2A1-203, Transcript of general transcription factor IIA subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2A1, Length 6,306 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-203ENST00000553612 GUCY2FP51841 1108 aa10.09□□□□□ -0.79
GTF2A1-203ENST00000553612 SLC7A5Q01650 507 aa10.09□□□□□ -0.79
GTF2A1-203ENST00000553612 FAM133BQ5BKY9 247 aaKnown RBP10.09□□□□□ -0.79
GTF2A1-203ENST00000553612 POLD4Q9HCU8 107 aa10.09□□□□□ -0.79
GTF2A1-203ENST00000553612 SCOCQ9UIL1 159 aa10.09□□□□□ -0.79
GTF2A1-203ENST00000553612 SMARCA2P51531 1590 aa10.09□□□□□ -0.79
GTF2A1-203ENST00000553612 COQ9O75208 318 aa10.09□□□□□ -0.79
GTF2A1-203ENST00000553612 SLFNL1Q499Z3 407 aa10.09□□□□□ -0.79
GTF2A1-203ENST00000553612 RABGAP1Q9Y3P9 1069 aa10.09□□□□□ -0.79
GTF2A1-203ENST00000553612 USP19O94966 1318 aa10.09□□□□□ -0.79
GTF2A1-203ENST00000553612 ELP1O95163 1332 aa10.09□□□□□ -0.79
GTF2A1-203ENST00000553612 DYDC2Q96IM9 177 aa10.09□□□□□ -0.79
GTF2A1-203ENST00000553612 MOSPD1Q9UJG1 213 aa10.09□□□□□ -0.79
GTF2A1-203ENST00000553612 MTUS1Q9ULD2 1270 aa10.09□□□□□ -0.79
GTF2A1-203ENST00000553612 TRIM35Q9UPQ4 493 aa10.09□□□□□ -0.79
GTF2A1-203ENST00000553612 ZNF330Q9Y3S2 320 aaPredicted RBP10.09□□□□□ -0.79
GTF2A1-203ENST00000553612 RNF123Q5XPI4 1314 aa10.09□□□□□ -0.79
GTF2A1-203ENST00000553612 ANKRD36BQ8N2N9 1353 aa10.09□□□□□ -0.79
GTF2A1-203ENST00000553612 GALNT17Q6IS24 598 aa10.09□□□□□ -0.79
GTF2A1-203ENST00000553612 RAB3IL1Q8TBN0 382 aa10.09□□□□□ -0.79
GTF2A1-203ENST00000553612 ARPC5LQ9BPX5 153 aa10.09□□□□□ -0.79
GTF2A1-203ENST00000553612 CNGB3Q9NQW8 809 aa10.09□□□□□ -0.79
GTF2A1-203ENST00000553612 RPGRIP1LQ68CZ1 1315 aa10.09□□□□□ -0.79
GTF2A1-203ENST00000553612 EVI5O60447 810 aa10.09□□□□□ -0.79
GTF2A1-203ENST00000553612 ZRANB2O95218 330 aaKnown RBP eCLIP10.09□□□□□ -0.79
GTF2A1-203ENST00000553612 BASP1P80723 227 aaKnown RBP10.09□□□□□ -0.79
GTF2A1-203ENST00000553612 CADPS2Q86UW7 1296 aa10.09□□□□□ -0.79
GTF2A1-203ENST00000553612 ABCB6Q9NP58 842 aa10.09□□□□□ -0.79
GTF2A1-203ENST00000553612 BATF3Q9NR55 127 aa10.09□□□□□ -0.79
GTF2A1-203ENST00000553612 SPATA7Q9P0W8 599 aa10.09□□□□□ -0.79
GTF2A1-203ENST00000553612 IQCEQ6IPM2 695 aa10.08□□□□□ -0.8
GTF2A1-203ENST00000553612 PPP1R13BQ96KQ4 1090 aa10.08□□□□□ -0.8
GTF2A1-203ENST00000553612 ALS2CR12Q96Q35 445 aa10.08□□□□□ -0.8
GTF2A1-203ENST00000553612 FTOQ9C0B1 505 aaKnown RBP eCLIP10.08□□□□□ -0.8
GTF2A1-203ENST00000553612 ZNF180Q9UJW8 692 aa10.08□□□□□ -0.8
GTF2A1-203ENST00000553612 TRPC6Q9Y210 931 aa10.08□□□□□ -0.8
GTF2A1-203ENST00000553612 PTPRCP08575 1304 aa10.08□□□□□ -0.8
GTF2A1-203ENST00000553612 GSDMBQ8TAX9 411 aa10.08□□□□□ -0.8
GTF2A1-203ENST00000553612 CTAGE9A4FU28 777 aa10.08□□□□□ -0.8
GTF2A1-203ENST00000553612 UPP2O95045 317 aa10.08□□□□□ -0.8
GTF2A1-203ENST00000553612 SLC8A3P57103 927 aa10.08□□□□□ -0.8
GTF2A1-203ENST00000553612 PDCLQ13371 301 aa10.08□□□□□ -0.8
GTF2A1-203ENST00000553612 ZFYVE27Q5T4F4 411 aa10.08□□□□□ -0.8
GTF2A1-203ENST00000553612 FSIP1Q8NA03 581 aa10.08□□□□□ -0.8
GTF2A1-203ENST00000553612 PPFIBP2Q8ND30 876 aa10.08□□□□□ -0.8
GTF2A1-203ENST00000553612 CASP10Q92851 521 aa10.08□□□□□ -0.8
GTF2A1-203ENST00000553612 ANO10Q9NW15 660 aa10.08□□□□□ -0.8
GTF2A1-203ENST00000553612 TXNDC9O14530 226 aa10.08□□□□□ -0.8
GTF2A1-203ENST00000553612 OSBPL10Q9BXB5 764 aa10.08□□□□□ -0.8
GTF2A1-203ENST00000553612 SLC40A1Q9NP59 571 aa10.08□□□□□ -0.8
GTF2A1-203ENST00000553612 DNAAF2Q9NVR5 837 aaKnown RBP10.08□□□□□ -0.8
GTF2A1-203ENST00000553612 BLOC1S6Q9UL45 172 aa10.08□□□□□ -0.8
GTF2A1-203ENST00000553612 VIL1P09327 827 aaKnown RBP10.08□□□□□ -0.8
GTF2A1-203ENST00000553612 RNASE9P60153 205 aaKnown RBP10.08□□□□□ -0.8
GTF2A1-203ENST00000553612 ITGB3BPQ13352 177 aaPredicted RBP10.08□□□□□ -0.8
GTF2A1-203ENST00000553612 C1QTNF12Q5T7M4 302 aa10.08□□□□□ -0.8
GTF2A1-203ENST00000553612 RUFY3Q7L099 469 aa10.08□□□□□ -0.8
GTF2A1-203ENST00000553612 RUNDC1Q96C34 613 aa10.08□□□□□ -0.8
GTF2A1-203ENST00000553612 CLMNQ96JQ2 1002 aa10.08□□□□□ -0.8
GTF2A1-203ENST00000553612 GORASP1Q9BQQ3 440 aa10.08□□□□□ -0.8
GTF2A1-203ENST00000553612 LZTS2Q9BRK4 669 aa10.08□□□□□ -0.8
GTF2A1-203ENST00000553612 TACC1O75410 805 aa10.07□□□□□ -0.8
GTF2A1-203ENST00000553612 TAOK1Q7L7X3 1001 aa10.07□□□□□ -0.8
GTF2A1-203ENST00000553612 MFN1Q8IWA4 741 aa10.07□□□□□ -0.8
GTF2A1-203ENST00000553612 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.07□□□□□ -0.8
GTF2A1-203ENST00000553612 ZNF280CQ8ND82 737 aa10.07□□□□□ -0.8
GTF2A1-203ENST00000553612 EPSTI1Q96J88 318 aa10.07□□□□□ -0.8
GTF2A1-203ENST00000553612 MPHOSPH6Q99547 160 aaKnown RBP10.07□□□□□ -0.8
GTF2A1-203ENST00000553612 CYP46A1Q9Y6A2 500 aa10.07□□□□□ -0.8
GTF2A1-203ENST00000553612 TROVE2P10155 538 aaKnown RBP eCLIP10.07□□□□□ -0.8
GTF2A1-203ENST00000553612 GFAPP14136 432 aa10.07□□□□□ -0.8
GTF2A1-203ENST00000553612 UBASH3AP57075 661 aa10.07□□□□□ -0.8
GTF2A1-203ENST00000553612 RHBDL3P58872 404 aa10.07□□□□□ -0.8
GTF2A1-203ENST00000553612 STX1AQ16623 288 aa10.07□□□□□ -0.8
GTF2A1-203ENST00000553612 SND1Q7KZF4 910 aaKnown RBP eCLIP10.07□□□□□ -0.8
GTF2A1-203ENST00000553612 PROSER2Q86WR7 435 aaPredicted RBP10.07□□□□□ -0.8
GTF2A1-203ENST00000553612 CACNA2D3Q8IZS8 1091 aa10.07□□□□□ -0.8
GTF2A1-203ENST00000553612 FAM133AQ8N9E0 248 aa10.07□□□□□ -0.8
GTF2A1-203ENST00000553612 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.07□□□□□ -0.8
GTF2A1-203ENST00000553612 DACT3Q96B18 629 aaPredicted RBP10.07□□□□□ -0.8
GTF2A1-203ENST00000553612 NUP88Q99567 741 aaPredicted RBP10.07□□□□□ -0.8
GTF2A1-203ENST00000553612 ANKIB1Q9P2G1 1089 aa10.07□□□□□ -0.8
GTF2A1-203ENST00000553612 DNAJC6O75061 913 aa10.07□□□□□ -0.8
GTF2A1-203ENST00000553612 FGFR1OPO95684 399 aaKnown RBP10.07□□□□□ -0.8
GTF2A1-203ENST00000553612 CPA1P15085 419 aa10.07□□□□□ -0.8
GTF2A1-203ENST00000553612 MAEAQ7L5Y9 396 aa10.07□□□□□ -0.8
GTF2A1-203ENST00000553612 SPG7Q9UQ90 795 aa10.07□□□□□ -0.8
GTF2A1-203ENST00000553612 NLRP5P59047 1200 aa10.07□□□□□ -0.8
GTF2A1-203ENST00000553612 CASP8Q14790 479 aa10.07□□□□□ -0.8
GTF2A1-203ENST00000553612 PSMB7Q99436 277 aa10.07□□□□□ -0.8
GTF2A1-203ENST00000553612 RANBP17Q9H2T7 1088 aaKnown RBP10.07□□□□□ -0.8
GTF2A1-203ENST00000553612 TMEM154Q6P9G4 183 aa10.06□□□□□ -0.8
GTF2A1-203ENST00000553612 COQ7Q99807 217 aa10.06□□□□□ -0.8
GTF2A1-203ENST00000553612 ZC4H2Q9NQZ6 224 aa10.06□□□□□ -0.8
GTF2A1-203ENST00000553612 SAMD15Q9P1V8 674 aa10.06□□□□□ -0.8
GTF2A1-203ENST00000553612 R3HDM2Q9Y2K5 976 aaKnown RBP10.06□□□□□ -0.8
GTF2A1-203ENST00000553612 RAB27AP51159 221 aa10.06□□□□□ -0.8
GTF2A1-203ENST00000553612 PPFIA1Q13136 1202 aa10.06□□□□□ -0.8
GTF2A1-203ENST00000553612 PRPF40BQ6NWY9 871 aaKnown RBP10.06□□□□□ -0.8
GTF2A1-203ENST00000553612 EXOC5O00471 708 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms