RNA–Protein interactions for RNA: ENST00000553447.6

PSEN1-206, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 572 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-206ENST00000553447 SLF2Q8IX21 1173 aa20.92■□□□□ 0.94
PSEN1-206ENST00000553447 NEK1Q96PY6 1258 aa20.92■□□□□ 0.94
PSEN1-206ENST00000553447 NAPBQ9H115 298 aa20.92■□□□□ 0.94
PSEN1-206ENST00000553447 FOCADQ5VW36 1801 aa20.92■□□□□ 0.94
PSEN1-206ENST00000553447 NAV1Q8NEY1 1877 aa20.92■□□□□ 0.94
PSEN1-206ENST00000553447 E7EWF7 191 aa20.91■□□□□ 0.94
PSEN1-206ENST00000553447 RPS6KB1P23443 525 aa20.91■□□□□ 0.94
PSEN1-206ENST00000553447 COL4A5P29400 1685 aa20.91■□□□□ 0.94
PSEN1-206ENST00000553447 HAND2P61296 217 aa20.91■□□□□ 0.94
PSEN1-206ENST00000553447 ADAMTSL1Q8N6G6 1762 aa20.91■□□□□ 0.94
PSEN1-206ENST00000553447 NLGN2Q8NFZ4 835 aa20.91■□□□□ 0.94
PSEN1-206ENST00000553447 SDR42E1Q8WUS8 393 aa20.91■□□□□ 0.94
PSEN1-206ENST00000553447 FAM163AQ96GL9 167 aaPredicted RBP20.91■□□□□ 0.94
PSEN1-206ENST00000553447 NOL10Q9BSC4 688 aaKnown RBP20.91■□□□□ 0.94
PSEN1-206ENST00000553447 CRNKL1Q9BZJ0 848 aaKnown RBP20.91■□□□□ 0.94
PSEN1-206ENST00000553447 KCNQ5Q9NR82 932 aa20.91■□□□□ 0.94
PSEN1-206ENST00000553447 ZNF277Q9NRM2 450 aaPredicted RBP20.91■□□□□ 0.94
PSEN1-206ENST00000553447 PDRG1Q9NUG6 133 aa20.91■□□□□ 0.94
PSEN1-206ENST00000553447 GAKO14976 1311 aa20.9■□□□□ 0.94
PSEN1-206ENST00000553447 USP17L3A6NCW0 530 aa20.9■□□□□ 0.94
PSEN1-206ENST00000553447 USP17L4A6NCW7 530 aa20.9■□□□□ 0.94
PSEN1-206ENST00000553447 BAG3O95817 575 aa20.9■□□□□ 0.94
PSEN1-206ENST00000553447 TDO2P48775 406 aa20.9■□□□□ 0.94
PSEN1-206ENST00000553447 PPP4CP60510 307 aa20.9■□□□□ 0.94
PSEN1-206ENST00000553447 DACT2Q5SW24 774 aa20.9■□□□□ 0.94
PSEN1-206ENST00000553447 USP17L1Q7RTZ2 530 aa20.9■□□□□ 0.94
PSEN1-206ENST00000553447 MXD3Q9BW11 206 aa20.9■□□□□ 0.94
PSEN1-206ENST00000553447 BCS1LQ9Y276 419 aa20.9■□□□□ 0.94
PSEN1-206ENST00000553447 GPR75-ASB3A0A0A6YYF3 556 aa20.89■□□□□ 0.93
PSEN1-206ENST00000553447 HMGB1P09429 215 aaKnown RBP20.89■□□□□ 0.93
PSEN1-206ENST00000553447 AK2P54819 239 aa20.89■□□□□ 0.93
PSEN1-206ENST00000553447 COL9A3Q14050 684 aaPredicted RBP20.89■□□□□ 0.93
PSEN1-206ENST00000553447 GIMAP6Q6P9H5 292 aa20.89■□□□□ 0.93
PSEN1-206ENST00000553447 CERS3Q8IU89 383 aa20.89■□□□□ 0.93
PSEN1-206ENST00000553447 LARGE2Q8N3Y3 721 aa20.89■□□□□ 0.93
PSEN1-206ENST00000553447 NBPF3Q9H094 633 aa20.89■□□□□ 0.93
PSEN1-206ENST00000553447 ECM29Q5VYK3 1845 aa20.89■□□□□ 0.93
PSEN1-206ENST00000553447 YDJCA8MPS7 323 aa20.88■□□□□ 0.93
PSEN1-206ENST00000553447 IARSP41252 1262 aaKnown RBP20.88■□□□□ 0.93
PSEN1-206ENST00000553447 BTDP43251 543 aa20.88■□□□□ 0.93
PSEN1-206ENST00000553447 ALDH8A1Q9H2A2 487 aaPredicted RBP20.88■□□□□ 0.93
PSEN1-206ENST00000553447 TAOK3Q9H2K8 898 aa20.88■□□□□ 0.93
PSEN1-206ENST00000553447 TTF2Q9UNY4 1162 aaKnown RBP20.88■□□□□ 0.93
PSEN1-206ENST00000553447 F8W031 263 aaPredicted RBP20.87■□□□□ 0.93
PSEN1-206ENST00000553447 TBC1D10CQ8IV04 446 aa20.87■□□□□ 0.93
PSEN1-206ENST00000553447 SH3RF3Q8TEJ3 882 aaPredicted RBP20.87■□□□□ 0.93
PSEN1-206ENST00000553447 ATP8A2Q9NTI2 1148 aa20.87■□□□□ 0.93
PSEN1-206ENST00000553447 DDX60LQ5H9U9 1706 aaKnown RBP20.87■□□□□ 0.93
PSEN1-206ENST00000553447 NOL8Q76FK4 1167 aaKnown RBP20.86■□□□□ 0.93
PSEN1-206ENST00000553447 DHX32Q7L7V1 743 aaKnown RBP20.86■□□□□ 0.93
PSEN1-206ENST00000553447 DAGLAQ9Y4D2 1042 aa20.86■□□□□ 0.93
PSEN1-206ENST00000553447 LTBP3Q9NS15 1303 aa20.85■□□□□ 0.93
PSEN1-206ENST00000553447 MYH1P12882 1939 aa20.85■□□□□ 0.93
PSEN1-206ENST00000553447 NFKBIEO00221 500 aa20.85■□□□□ 0.93
PSEN1-206ENST00000553447 PLCG2P16885 1265 aa20.85■□□□□ 0.93
PSEN1-206ENST00000553447 NIM1KQ8IY84 436 aa20.85■□□□□ 0.93
PSEN1-206ENST00000553447 SPRYD3Q8NCJ5 442 aa20.85■□□□□ 0.93
PSEN1-206ENST00000553447 NCOA7Q8NI08 942 aa20.85■□□□□ 0.93
PSEN1-206ENST00000553447 TMX3Q96JJ7 454 aa20.85■□□□□ 0.93
PSEN1-206ENST00000553447 DCP1AQ9NPI6 582 aaPredicted RBP20.85■□□□□ 0.93
PSEN1-206ENST00000553447 PPARAQ07869 468 aa20.84■□□□□ 0.93
PSEN1-206ENST00000553447 ANKRD1Q15327 319 aa20.84■□□□□ 0.93
PSEN1-206ENST00000553447 HHIPL2Q6UWX4 724 aa20.84■□□□□ 0.93
PSEN1-206ENST00000553447 TCEANC2Q96MN5 208 aa20.84■□□□□ 0.93
PSEN1-206ENST00000553447 FHDC1Q9C0D6 1143 aaPredicted RBP20.84■□□□□ 0.93
PSEN1-206ENST00000553447 ANAPC4Q9UJX5 808 aa20.84■□□□□ 0.93
PSEN1-206ENST00000553447 ZNRF3Q9ULT6 936 aa20.84■□□□□ 0.93
PSEN1-206ENST00000553447 LIMCH1Q9UPQ0 1083 aa20.84■□□□□ 0.93
PSEN1-206ENST00000553447 USP5P45974 858 aa20.83■□□□□ 0.93
PSEN1-206ENST00000553447 SCNN1DP51172 638 aa20.83■□□□□ 0.93
PSEN1-206ENST00000553447 EXOSC10Q01780 885 aaKnown RBP20.83■□□□□ 0.93
PSEN1-206ENST00000553447 CTDSPL2Q05D32 466 aa20.83■□□□□ 0.93
PSEN1-206ENST00000553447 CTR9Q6PD62 1173 aa20.83■□□□□ 0.93
PSEN1-206ENST00000553447 RALYLQ86SE5 291 aaKnown RBP20.83■□□□□ 0.93
PSEN1-206ENST00000553447 KIAA0825Q8IV33 1275 aa20.83■□□□□ 0.93
PSEN1-206ENST00000553447 MB21D2Q8IYB1 491 aaPredicted RBP20.83■□□□□ 0.93
PSEN1-206ENST00000553447 STAG1Q8WVM7 1258 aa20.83■□□□□ 0.93
PSEN1-206ENST00000553447 TEKT1Q969V4 418 aa20.83■□□□□ 0.93
PSEN1-206ENST00000553447 MRIQ9BWK5 157 aa20.83■□□□□ 0.93
PSEN1-206ENST00000553447 MYO3BQ8WXR4 1341 aa20.82■□□□□ 0.92
PSEN1-206ENST00000553447 MINDY4BA8MYZ0 360 aa20.82■□□□□ 0.92
PSEN1-206ENST00000553447 HSP90AA1P07900 732 aaKnown RBP20.82■□□□□ 0.92
PSEN1-206ENST00000553447 RHBDL3P58872 404 aa20.82■□□□□ 0.92
PSEN1-206ENST00000553447 HDLBPQ00341 1268 aaKnown RBP20.82■□□□□ 0.92
PSEN1-206ENST00000553447 TRDNQ13061 729 aa20.82■□□□□ 0.92
PSEN1-206ENST00000553447 TOB2Q14106 344 aaPredicted RBP20.82■□□□□ 0.92
PSEN1-206ENST00000553447 SBK1Q52WX2 424 aa20.82■□□□□ 0.92
PSEN1-206ENST00000553447 AKNAD1Q5T1N1 836 aa20.82■□□□□ 0.92
PSEN1-206ENST00000553447 TEX11Q8IYF3 940 aa20.82■□□□□ 0.92
PSEN1-206ENST00000553447 ARPP21Q9UBL0 812 aaPredicted RBP20.82■□□□□ 0.92
PSEN1-206ENST00000553447 MKRN1Q9UHC7 482 aaKnown RBP20.82■□□□□ 0.92
PSEN1-206ENST00000553447 NEDD4P46934 1319 aa20.81■□□□□ 0.92
PSEN1-206ENST00000553447 WDR19Q8NEZ3 1342 aa20.81■□□□□ 0.92
PSEN1-206ENST00000553447 USP17L12C9JPN9 530 aa20.81■□□□□ 0.92
PSEN1-206ENST00000553447 USP17L21D6R901 530 aa20.81■□□□□ 0.92
PSEN1-206ENST00000553447 MCM5P33992 734 aa20.81■□□□□ 0.92
PSEN1-206ENST00000553447 CRKP46108 304 aa20.81■□□□□ 0.92
PSEN1-206ENST00000553447 CUL4AQ13619 759 aa20.81■□□□□ 0.92
PSEN1-206ENST00000553447 RSBN1LQ6PCB5 846 aaPredicted RBP20.81■□□□□ 0.92
PSEN1-206ENST00000553447 Q6ZUG5 572 aa20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms