RNA–Protein interactions for RNA: ENST00000553078.5

CNOT2-243, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 3

Gene CNOT2, Length 440 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-243ENST00000553078 ESR2Q92731 530 aa11.91□□□□□ -0.5
CNOT2-243ENST00000553078 CRNKL1Q9BZJ0 848 aaKnown RBP11.91□□□□□ -0.5
CNOT2-243ENST00000553078 RBSNQ9H1K0 784 aa11.91□□□□□ -0.5
CNOT2-243ENST00000553078 TNMDQ9H2S6 317 aa11.91□□□□□ -0.5
CNOT2-243ENST00000553078 NCOA5Q9HCD5 579 aaKnown RBP11.91□□□□□ -0.5
CNOT2-243ENST00000553078 CCDC39Q9UFE4 941 aa11.91□□□□□ -0.5
CNOT2-243ENST00000553078 SRP68Q9UHB9 627 aaKnown RBP11.91□□□□□ -0.5
CNOT2-243ENST00000553078 MAST2Q6P0Q8 1798 aa11.91□□□□□ -0.5
CNOT2-243ENST00000553078 XBP1P17861 261 aa11.9□□□□□ -0.5
CNOT2-243ENST00000553078 GYG1P46976 350 aa11.9□□□□□ -0.5
CNOT2-243ENST00000553078 GSTO1P78417 241 aa11.9□□□□□ -0.5
CNOT2-243ENST00000553078 AKAP17AQ02040 695 aaKnown RBP11.9□□□□□ -0.5
CNOT2-243ENST00000553078 GRAPQ13588 217 aa11.9□□□□□ -0.5
CNOT2-243ENST00000553078 ZRSR1Q15695 479 aaKnown RBP11.9□□□□□ -0.5
CNOT2-243ENST00000553078 GIMAP6Q6P9H5 292 aa11.9□□□□□ -0.5
CNOT2-243ENST00000553078 SASS6Q6UVJ0 657 aa11.9□□□□□ -0.5
CNOT2-243ENST00000553078 FAM196AQ6ZSG2 479 aa11.9□□□□□ -0.5
CNOT2-243ENST00000553078 ZNF804AQ7Z570 1209 aa11.9□□□□□ -0.5
CNOT2-243ENST00000553078 DZIP1Q86YF9 867 aaKnown RBP11.9□□□□□ -0.5
CNOT2-243ENST00000553078 LCORLQ8N3X6 602 aa11.9□□□□□ -0.5
CNOT2-243ENST00000553078 JMYQ8N9B5 988 aa11.9□□□□□ -0.5
CNOT2-243ENST00000553078 GRAPLQ8TC17 118 aaPredicted RBP11.9□□□□□ -0.5
CNOT2-243ENST00000553078 KCNG4Q8TDN1 519 aa11.9□□□□□ -0.5
CNOT2-243ENST00000553078 ARHGEF1Q92888 912 aaKnown RBP11.9□□□□□ -0.5
CNOT2-243ENST00000553078 NSFL1CQ9UNZ2 370 aaKnown RBP11.9□□□□□ -0.5
CNOT2-243ENST00000553078 LEMD3Q9Y2U8 911 aa11.9□□□□□ -0.5
CNOT2-243ENST00000553078 STK36Q9NRP7 1315 aa11.89□□□□□ -0.51
CNOT2-243ENST00000553078 FOXP2O15409 715 aa11.89□□□□□ -0.51
CNOT2-243ENST00000553078 KINO60870 393 aaKnown RBP11.89□□□□□ -0.51
CNOT2-243ENST00000553078 CAVIN2O95810 425 aa11.89□□□□□ -0.51
CNOT2-243ENST00000553078 IARSP41252 1262 aaKnown RBP11.89□□□□□ -0.51
CNOT2-243ENST00000553078 PPARAQ07869 468 aa11.89□□□□□ -0.51
CNOT2-243ENST00000553078 SSRP1Q08945 709 aaKnown RBP11.89□□□□□ -0.51
CNOT2-243ENST00000553078 PPP2R5BQ15173 497 aa11.89□□□□□ -0.51
CNOT2-243ENST00000553078 STK38Q15208 465 aa11.89□□□□□ -0.51
CNOT2-243ENST00000553078 APOA5Q6Q788 366 aa11.89□□□□□ -0.51
CNOT2-243ENST00000553078 AEBP2Q6ZN18 517 aaPredicted RBP11.89□□□□□ -0.51
CNOT2-243ENST00000553078 SGMS1Q86VZ5 419 aa11.89□□□□□ -0.51
CNOT2-243ENST00000553078 MICU3Q86XE3 530 aa11.89□□□□□ -0.51
CNOT2-243ENST00000553078 IQCA1Q86XH1 822 aa11.89□□□□□ -0.51
CNOT2-243ENST00000553078 RNF214Q8ND24 703 aa11.89□□□□□ -0.51
CNOT2-243ENST00000553078 CELF1Q92879 486 aaKnown RBP11.89□□□□□ -0.51
CNOT2-243ENST00000553078 ALG1Q9BT22 464 aa11.89□□□□□ -0.51
CNOT2-243ENST00000553078 BCL2L12Q9HB09 334 aa11.89□□□□□ -0.51
CNOT2-243ENST00000553078 RTN4Q9NQC3 1192 aaKnown RBP11.89□□□□□ -0.51
CNOT2-243ENST00000553078 ANKIB1Q9P2G1 1089 aa11.89□□□□□ -0.51
CNOT2-243ENST00000553078 A0A1B0GUL6 1792 aa11.89□□□□□ -0.51
CNOT2-243ENST00000553078 NEDD4P46934 1319 aa11.88□□□□□ -0.51
CNOT2-243ENST00000553078 XDHP47989 1333 aa11.88□□□□□ -0.51
CNOT2-243ENST00000553078 GOLGA6L6A8MZA4 724 aa11.88□□□□□ -0.51
CNOT2-243ENST00000553078 ESPNB1AK53 854 aa11.88□□□□□ -0.51
CNOT2-243ENST00000553078 ZBTB22O15209 634 aa11.88□□□□□ -0.51
CNOT2-243ENST00000553078 KDM4AO75164 1064 aa11.88□□□□□ -0.51
CNOT2-243ENST00000553078 CTDNEP1O95476 244 aa11.88□□□□□ -0.51
CNOT2-243ENST00000553078 YEATS4O95619 227 aa11.88□□□□□ -0.51
CNOT2-243ENST00000553078 ME1P48163 572 aa11.88□□□□□ -0.51
CNOT2-243ENST00000553078 KCNQ4P56696 695 aa11.88□□□□□ -0.51
CNOT2-243ENST00000553078 ANTXR2P58335 489 aa11.88□□□□□ -0.51
CNOT2-243ENST00000553078 CHAF1AQ13111 956 aaPredicted RBP11.88□□□□□ -0.51
CNOT2-243ENST00000553078 RTN1Q16799 776 aa11.88□□□□□ -0.51
CNOT2-243ENST00000553078 MIGA1Q8NAN2 632 aa11.88□□□□□ -0.51
CNOT2-243ENST00000553078 WDR66Q8TBY9 1149 aa11.88□□□□□ -0.51
CNOT2-243ENST00000553078 RBM17Q96I25 401 aaKnown RBP11.88□□□□□ -0.51
CNOT2-243ENST00000553078 BRIP1Q9BX63 1249 aa11.88□□□□□ -0.51
CNOT2-243ENST00000553078 CLSTN2Q9H4D0 955 aa11.88□□□□□ -0.51
CNOT2-243ENST00000553078 EPB41L4AQ9HCS5 686 aaPredicted RBP11.88□□□□□ -0.51
CNOT2-243ENST00000553078 TFIP11Q9UBB9 837 aaKnown RBP11.88□□□□□ -0.51
CNOT2-243ENST00000553078 ARPP21Q9UBL0 812 aaPredicted RBP11.88□□□□□ -0.51
CNOT2-243ENST00000553078 IQSEC3Q9UPP2 1182 aaPredicted RBP11.88□□□□□ -0.51
CNOT2-243ENST00000553078 C4AP0C0L4 1744 aa11.87□□□□□ -0.51
CNOT2-243ENST00000553078 A0A0G2JLW4 131 aa11.87□□□□□ -0.51
CNOT2-243ENST00000553078 GSG1L2A8MUP6 293 aa11.87□□□□□ -0.51
CNOT2-243ENST00000553078 MINDY4BA8MYZ0 360 aa11.87□□□□□ -0.51
CNOT2-243ENST00000553078 BAG3O95817 575 aa11.87□□□□□ -0.51
CNOT2-243ENST00000553078 LDHCP07864 332 aa11.87□□□□□ -0.51
CNOT2-243ENST00000553078 CALM1P0DP23 149 aa11.87□□□□□ -0.51
CNOT2-243ENST00000553078 CALM2P0DP24 149 aa11.87□□□□□ -0.51
CNOT2-243ENST00000553078 CALM3P0DP25 149 aa11.87□□□□□ -0.51
CNOT2-243ENST00000553078 CTDSPL2Q05D32 466 aa11.87□□□□□ -0.51
CNOT2-243ENST00000553078 CYB5R4Q7L1T6 521 aa11.87□□□□□ -0.51
CNOT2-243ENST00000553078 TMC4Q7Z404 712 aa11.87□□□□□ -0.51
CNOT2-243ENST00000553078 FBXO33Q7Z6M2 555 aa11.87□□□□□ -0.51
CNOT2-243ENST00000553078 SLF2Q8IX21 1173 aa11.87□□□□□ -0.51
CNOT2-243ENST00000553078 TMX4Q9H1E5 349 aaPredicted RBP11.87□□□□□ -0.51
CNOT2-243ENST00000553078 ANAPC4Q9UJX5 808 aa11.87□□□□□ -0.51
CNOT2-243ENST00000553078 TAF1LQ8IZX4 1826 aa11.87□□□□□ -0.51
CNOT2-243ENST00000553078 NID2Q14112 1375 aa11.87□□□□□ -0.51
CNOT2-243ENST00000553078 SNAP23O00161 211 aa11.86□□□□□ -0.51
CNOT2-243ENST00000553078 ONECUT3O60422 494 aaPredicted RBP11.86□□□□□ -0.51
CNOT2-243ENST00000553078 ATP2B4P23634 1241 aa11.86□□□□□ -0.51
CNOT2-243ENST00000553078 HSPA1LP34931 641 aa11.86□□□□□ -0.51
CNOT2-243ENST00000553078 GUCY1B3Q02153 619 aa11.86□□□□□ -0.51
CNOT2-243ENST00000553078 PDE4BQ07343 736 aa11.86□□□□□ -0.51
CNOT2-243ENST00000553078 COL9A3Q14050 684 aaPredicted RBP11.86□□□□□ -0.51
CNOT2-243ENST00000553078 CCDC178Q5BJE1 867 aa11.86□□□□□ -0.51
CNOT2-243ENST00000553078 KRT27Q7Z3Y8 459 aa11.86□□□□□ -0.51
CNOT2-243ENST00000553078 CATIPQ7Z7H3 387 aa11.86□□□□□ -0.51
CNOT2-243ENST00000553078 ZSCAN30Q86W11 494 aa11.86□□□□□ -0.51
CNOT2-243ENST00000553078 FBXO18Q8NFZ0 1043 aa11.86□□□□□ -0.51
CNOT2-243ENST00000553078 LY9Q9HBG7 655 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms