RNA–Protein interactions for RNA: ENST00000552645.5

LETMD1-234, Transcript of LETM1 domain containing 1, humanhuman

TSL 1 (best)

Gene LETMD1, Length 1,623 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-234ENST00000552645 ZDHHC15Q96MV8 337 aa12.05□□□□□ -0.48
LETMD1-234ENST00000552645 PAG1Q9NWQ8 432 aa12.05□□□□□ -0.48
LETMD1-234ENST00000552645 PGAP2Q9UHJ9 254 aa12.05□□□□□ -0.48
LETMD1-234ENST00000552645 DAGLAQ9Y4D2 1042 aa12.05□□□□□ -0.48
LETMD1-234ENST00000552645 TCP10L2B9ZVM9 353 aa12.04□□□□□ -0.48
LETMD1-234ENST00000552645 ERC2O15083 957 aa12.04□□□□□ -0.48
LETMD1-234ENST00000552645 ITGBL1O95965 494 aaPredicted RBP12.04□□□□□ -0.48
LETMD1-234ENST00000552645 MAP3K12Q12852 859 aa12.04□□□□□ -0.48
LETMD1-234ENST00000552645 PRAMEF18Q5VWM3 479 aa12.04□□□□□ -0.48
LETMD1-234ENST00000552645 APOBEC3FQ8IUX4 373 aaKnown RBP12.04□□□□□ -0.48
LETMD1-234ENST00000552645 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.04□□□□□ -0.48
LETMD1-234ENST00000552645 NSUN4Q96CB9 384 aaKnown RBP12.04□□□□□ -0.48
LETMD1-234ENST00000552645 ZBED3Q96IU2 234 aaPredicted RBP12.04□□□□□ -0.48
LETMD1-234ENST00000552645 HAUS7Q99871 368 aa12.04□□□□□ -0.48
LETMD1-234ENST00000552645 NOL10Q9BSC4 688 aaKnown RBP12.04□□□□□ -0.48
LETMD1-234ENST00000552645 TMOD2Q9NZR1 351 aa12.04□□□□□ -0.48
LETMD1-234ENST00000552645 ZNF70Q9UC06 446 aaPredicted RBP12.04□□□□□ -0.48
LETMD1-234ENST00000552645 TTC41PQ6P2S7 1318 aa12.04□□□□□ -0.48
LETMD1-234ENST00000552645 LDHCP07864 332 aa12.04□□□□□ -0.48
LETMD1-234ENST00000552645 CYP7A1P22680 504 aa12.04□□□□□ -0.48
LETMD1-234ENST00000552645 BTDP43251 543 aa12.04□□□□□ -0.48
LETMD1-234ENST00000552645 APOBEC3HQ6NTF7 200 aaKnown RBP12.04□□□□□ -0.48
LETMD1-234ENST00000552645 MAGEB6Q8N7X4 407 aa12.04□□□□□ -0.48
LETMD1-234ENST00000552645 ZNF384Q8TF68 577 aa12.04□□□□□ -0.48
LETMD1-234ENST00000552645 MRIQ9BWK5 157 aa12.04□□□□□ -0.48
LETMD1-234ENST00000552645 USP40Q9NVE5 1235 aa12.04□□□□□ -0.48
LETMD1-234ENST00000552645 MROH7-TTC4A0A0A0MT08 1334 aa12.03□□□□□ -0.48
LETMD1-234ENST00000552645 PITPNM2Q9BZ72 1349 aa12.03□□□□□ -0.48
LETMD1-234ENST00000552645 GLRX3O76003 335 aaKnown RBP12.03□□□□□ -0.48
LETMD1-234ENST00000552645 PDE1AP54750 535 aa12.03□□□□□ -0.48
LETMD1-234ENST00000552645 SPDYE2Q495Y8 402 aa12.03□□□□□ -0.48
LETMD1-234ENST00000552645 SLC9C2Q5TAH2 1124 aa12.03□□□□□ -0.48
LETMD1-234ENST00000552645 CDC42EP5Q6NZY7 148 aa12.03□□□□□ -0.48
LETMD1-234ENST00000552645 CELF2O95319 508 aaKnown RBP12.02□□□□□ -0.49
LETMD1-234ENST00000552645 PI4K2BQ8TCG2 481 aa12.02□□□□□ -0.49
LETMD1-234ENST00000552645 CDCA5Q96FF9 252 aa12.02□□□□□ -0.49
LETMD1-234ENST00000552645 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.02□□□□□ -0.49
LETMD1-234ENST00000552645 DEFB129Q9H1M3 183 aa12.02□□□□□ -0.49
LETMD1-234ENST00000552645 AATFQ9NY61 560 aaKnown RBP eCLIP12.02□□□□□ -0.49
LETMD1-234ENST00000552645 PDE6AP16499 860 aa12.01□□□□□ -0.49
LETMD1-234ENST00000552645 HTRA3P83110 453 aa12.01□□□□□ -0.49
LETMD1-234ENST00000552645 TCP10Q12799 353 aa12.01□□□□□ -0.49
LETMD1-234ENST00000552645 PICALMQ13492 652 aa12.01□□□□□ -0.49
LETMD1-234ENST00000552645 TNFAIP1Q13829 316 aa12.01□□□□□ -0.49
LETMD1-234ENST00000552645 CENPQQ7L2Z9 268 aaPredicted RBP12.01□□□□□ -0.49
LETMD1-234ENST00000552645 ADGRA1Q86SQ6 560 aa12.01□□□□□ -0.49
LETMD1-234ENST00000552645 MIGA1Q8NAN2 632 aa12.01□□□□□ -0.49
LETMD1-234ENST00000552645 GAKO14976 1311 aa12.01□□□□□ -0.49
LETMD1-234ENST00000552645 PASKQ96RG2 1323 aa12.01□□□□□ -0.49
LETMD1-234ENST00000552645 SALL3Q9BXA9 1300 aa12.01□□□□□ -0.49
LETMD1-234ENST00000552645 GPR75-ASB3A0A0A6YYF3 556 aa12□□□□□ -0.49
LETMD1-234ENST00000552645 TRIM6-TRIM34B2RNG4 842 aa12□□□□□ -0.49
LETMD1-234ENST00000552645 BAG3O95817 575 aa12□□□□□ -0.49
LETMD1-234ENST00000552645 HSPA6P17066 643 aa12□□□□□ -0.49
LETMD1-234ENST00000552645 TNNI2P48788 182 aa12□□□□□ -0.49
LETMD1-234ENST00000552645 APLP1P51693 650 aa12□□□□□ -0.49
LETMD1-234ENST00000552645 PRKG1Q13976 671 aa12□□□□□ -0.49
LETMD1-234ENST00000552645 RASA3Q14644 834 aa12□□□□□ -0.49
LETMD1-234ENST00000552645 SLFNL1Q499Z3 407 aa12□□□□□ -0.49
LETMD1-234ENST00000552645 PLEKHM2Q8IWE5 1019 aa12□□□□□ -0.49
LETMD1-234ENST00000552645 FAM163AQ96GL9 167 aaPredicted RBP12□□□□□ -0.49
LETMD1-234ENST00000552645 CDK5RAP2Q96SN8 1893 aa12□□□□□ -0.49
LETMD1-234ENST00000552645 TMEM39BQ9GZU3 492 aa12□□□□□ -0.49
LETMD1-234ENST00000552645 STAP2Q9UGK3 403 aa12□□□□□ -0.49
LETMD1-234ENST00000552645 ABT1Q9ULW3 272 aaKnown RBP12□□□□□ -0.49
LETMD1-234ENST00000552645 ZNF532Q9HCE3 1301 aa12□□□□□ -0.49
LETMD1-234ENST00000552645 TMEM88BA6NKF7 163 aa12□□□□□ -0.49
LETMD1-234ENST00000552645 CHGBP05060 677 aa12□□□□□ -0.49
LETMD1-234ENST00000552645 NFIAQ12857 509 aa12□□□□□ -0.49
LETMD1-234ENST00000552645 TTLL12Q14166 644 aaPredicted RBP12□□□□□ -0.49
LETMD1-234ENST00000552645 TEX11Q8IYF3 940 aa12□□□□□ -0.49
LETMD1-234ENST00000552645 SH3RF3Q8TEJ3 882 aaPredicted RBP12□□□□□ -0.49
LETMD1-234ENST00000552645 FSD1Q9BTV5 496 aa12□□□□□ -0.49
LETMD1-234ENST00000552645 NF2P35240 595 aa11.99□□□□□ -0.49
LETMD1-234ENST00000552645 DYNLL1P63167 89 aaKnown RBP11.99□□□□□ -0.49
LETMD1-234ENST00000552645 CST9Q5W186 159 aa11.99□□□□□ -0.49
LETMD1-234ENST00000552645 ZSCAN29Q8IWY8 852 aaPredicted RBP11.99□□□□□ -0.49
LETMD1-234ENST00000552645 RILPL2Q969X0 211 aa11.99□□□□□ -0.49
LETMD1-234ENST00000552645 MAGEB6P1A0A0J9YX57 407 aa11.98□□□□□ -0.49
LETMD1-234ENST00000552645 RGS3P49796 1198 aa11.98□□□□□ -0.49
LETMD1-234ENST00000552645 NBPF12Q5TAG4 269 aaPredicted RBP11.98□□□□□ -0.49
LETMD1-234ENST00000552645 ZSCAN25Q6NSZ9 544 aa11.98□□□□□ -0.49
LETMD1-234ENST00000552645 SKAP1Q86WV1 359 aa11.98□□□□□ -0.49
LETMD1-234ENST00000552645 CDAN1Q8IWY9 1227 aa11.98□□□□□ -0.49
LETMD1-234ENST00000552645 KBTBD3Q8NAB2 608 aa11.98□□□□□ -0.49
LETMD1-234ENST00000552645 FZD1Q9UP38 647 aa11.98□□□□□ -0.49
LETMD1-234ENST00000552645 CNTNAP1P78357 1384 aa11.98□□□□□ -0.49
LETMD1-234ENST00000552645 RRP9O43818 475 aaKnown RBP11.97□□□□□ -0.49
LETMD1-234ENST00000552645 PLCG2P16885 1265 aa11.97□□□□□ -0.49
LETMD1-234ENST00000552645 ADD2P35612 726 aa11.97□□□□□ -0.49
LETMD1-234ENST00000552645 RHBDL3P58872 404 aa11.97□□□□□ -0.49
LETMD1-234ENST00000552645 GRM1Q13255 1194 aa11.97□□□□□ -0.49
LETMD1-234ENST00000552645 PAXIP1Q6ZW49 1069 aaPredicted RBP11.97□□□□□ -0.49
LETMD1-234ENST00000552645 C2orf69Q8N8R5 385 aa11.97□□□□□ -0.49
LETMD1-234ENST00000552645 TGFBRAP1Q8WUH2 860 aa11.97□□□□□ -0.49
LETMD1-234ENST00000552645 FAM198AQ9UFP1 575 aa11.97□□□□□ -0.49
LETMD1-234ENST00000552645 PPP2R3BQ9Y5P8 575 aa11.97□□□□□ -0.49
LETMD1-234ENST00000552645 CEP350Q5VT06 3117 aa11.97□□□□□ -0.49
LETMD1-234ENST00000552645 FOCADQ5VW36 1801 aa11.97□□□□□ -0.49
LETMD1-234ENST00000552645 MYH1P12882 1939 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms