RNA–Protein interactions for RNA: ENST00000550418.5

RBFOX1-212, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-212ENST00000550418 CABLES1Q8TDN4 633 aa17.79■□□□□ 0.44
RBFOX1-212ENST00000550418 ATP6V1AP38606 617 aa17.79■□□□□ 0.44
RBFOX1-212ENST00000550418 TBC1D8BQ0IIM8 1120 aa17.79■□□□□ 0.44
RBFOX1-212ENST00000550418 WWC2Q6AWC2 1192 aa17.79■□□□□ 0.44
RBFOX1-212ENST00000550418 TTC21AQ8NDW8 1320 aa17.79■□□□□ 0.44
RBFOX1-212ENST00000550418 MYO5CQ9NQX4 1742 aa17.79■□□□□ 0.44
RBFOX1-212ENST00000550418 ATP8B1O43520 1251 aa17.79■□□□□ 0.44
RBFOX1-212ENST00000550418 CUTAO60888 179 aa17.79■□□□□ 0.44
RBFOX1-212ENST00000550418 TDRD7Q8NHU6 1098 aaKnown RBP17.78■□□□□ 0.44
RBFOX1-212ENST00000550418 STAMBPO95630 424 aa17.78■□□□□ 0.44
RBFOX1-212ENST00000550418 JAKMIP2Q96AA8 810 aa17.78■□□□□ 0.44
RBFOX1-212ENST00000550418 C8orf37Q96NL8 207 aa17.78■□□□□ 0.44
RBFOX1-212ENST00000550418 VAT1LQ9HCJ6 419 aa17.78■□□□□ 0.44
RBFOX1-212ENST00000550418 ZSCAN29Q8IWY8 852 aaPredicted RBP17.78■□□□□ 0.44
RBFOX1-212ENST00000550418 IFT20Q8IY31 132 aa17.78■□□□□ 0.44
RBFOX1-212ENST00000550418 HOMER2Q9NSB8 354 aa17.78■□□□□ 0.44
RBFOX1-212ENST00000550418 ABCC4O15439 1325 aa17.78■□□□□ 0.44
RBFOX1-212ENST00000550418 SBNO2Q9Y2G9 1366 aa17.78■□□□□ 0.44
RBFOX1-212ENST00000550418 CHD1O14646 1710 aa17.78■□□□□ 0.44
RBFOX1-212ENST00000550418 GPTP24298 496 aa17.78■□□□□ 0.44
RBFOX1-212ENST00000550418 IFT74Q96LB3 600 aa17.78■□□□□ 0.44
RBFOX1-212ENST00000550418 HELLSQ9NRZ9 838 aa17.78■□□□□ 0.44
RBFOX1-212ENST00000550418 MTRF1LQ9UGC7 380 aaKnown RBP17.78■□□□□ 0.44
RBFOX1-212ENST00000550418 ZNF521Q96K83 1311 aa17.78■□□□□ 0.44
RBFOX1-212ENST00000550418 EXOC5O00471 708 aa17.77■□□□□ 0.44
RBFOX1-212ENST00000550418 POLR2DO15514 142 aaKnown RBP17.77■□□□□ 0.44
RBFOX1-212ENST00000550418 KRT2P35908 639 aa17.77■□□□□ 0.44
RBFOX1-212ENST00000550418 MAP3K9P80192 1104 aa17.77■□□□□ 0.44
RBFOX1-212ENST00000550418 TFCP2Q12800 502 aa17.77■□□□□ 0.44
RBFOX1-212ENST00000550418 TBC1D5Q92609 795 aa17.77■□□□□ 0.44
RBFOX1-212ENST00000550418 MRVI1Q9Y6F6 885 aa17.77■□□□□ 0.44
RBFOX1-212ENST00000550418 MAP3K19Q56UN5 1328 aa17.77■□□□□ 0.44
RBFOX1-212ENST00000550418 KIF24Q5T7B8 1368 aa17.77■□□□□ 0.44
RBFOX1-212ENST00000550418 PTPRTO14522 1441 aa17.77■□□□□ 0.44
RBFOX1-212ENST00000550418 RGS12O14924 1447 aa17.77■□□□□ 0.44
RBFOX1-212ENST00000550418 VIMP08670 466 aaKnown RBP17.77■□□□□ 0.44
RBFOX1-212ENST00000550418 ZBTB16Q05516 673 aa17.77■□□□□ 0.44
RBFOX1-212ENST00000550418 SETDB1Q15047 1291 aa17.77■□□□□ 0.44
RBFOX1-212ENST00000550418 CACTINQ8WUQ7 758 aaKnown RBP17.77■□□□□ 0.44
RBFOX1-212ENST00000550418 SYNRGQ9UMZ2 1314 aa17.77■□□□□ 0.43
RBFOX1-212ENST00000550418 CHL1O00533 1208 aa17.77■□□□□ 0.43
RBFOX1-212ENST00000550418 GRIPAP1Q4V328 841 aa17.77■□□□□ 0.43
RBFOX1-212ENST00000550418 ADALQ6DHV7 355 aa17.77■□□□□ 0.43
RBFOX1-212ENST00000550418 SPATA24Q86W54 205 aa17.77■□□□□ 0.43
RBFOX1-212ENST00000550418 EYA1Q99502 592 aa17.77■□□□□ 0.43
RBFOX1-212ENST00000550418 PPP2R2CQ9Y2T4 447 aa17.77■□□□□ 0.43
RBFOX1-212ENST00000550418 IKBKGQ9Y6K9 419 aa17.77■□□□□ 0.43
RBFOX1-212ENST00000550418 RPGRIP1Q96KN7 1286 aa17.76■□□□□ 0.43
RBFOX1-212ENST00000550418 CTNND2Q9UQB3 1225 aa17.76■□□□□ 0.43
RBFOX1-212ENST00000550418 USP19O94966 1318 aa17.76■□□□□ 0.43
RBFOX1-212ENST00000550418 ADKP55263 362 aaKnown RBP17.76■□□□□ 0.43
RBFOX1-212ENST00000550418 WHAMMP3Q1A5X7 153 aa17.76■□□□□ 0.43
RBFOX1-212ENST00000550418 STXBP4Q6ZWJ1 553 aa17.76■□□□□ 0.43
RBFOX1-212ENST00000550418 GDAP1L1Q96MZ0 367 aa17.76■□□□□ 0.43
RBFOX1-212ENST00000550418 SLC4A4Q9Y6R1 1079 aa17.76■□□□□ 0.43
RBFOX1-212ENST00000550418 BUB1BO60566 1050 aaPredicted RBP17.76■□□□□ 0.43
RBFOX1-212ENST00000550418 CALML3P27482 149 aa17.76■□□□□ 0.43
RBFOX1-212ENST00000550418 SLF1Q9BQI6 1058 aa17.76■□□□□ 0.43
RBFOX1-212ENST00000550418 CABP5Q9NP86 173 aa17.76■□□□□ 0.43
RBFOX1-212ENST00000550418 MED4Q9NPJ6 270 aa17.76■□□□□ 0.43
RBFOX1-212ENST00000550418 SWAP70Q9UH65 585 aa17.76■□□□□ 0.43
RBFOX1-212ENST00000550418 PLA2R1Q13018 1463 aa17.76■□□□□ 0.43
RBFOX1-212ENST00000550418 MPHOSPH10O00566 681 aaKnown RBP17.76■□□□□ 0.43
RBFOX1-212ENST00000550418 RUFY4Q6ZNE9 571 aa17.76■□□□□ 0.43
RBFOX1-212ENST00000550418 RABGGTAQ92696 567 aa17.76■□□□□ 0.43
RBFOX1-212ENST00000550418 STIM2Q9P246 746 aa17.76■□□□□ 0.43
RBFOX1-212ENST00000550418 RRP15Q9Y3B9 282 aaKnown RBP17.76■□□□□ 0.43
RBFOX1-212ENST00000550418 CAPN7Q9Y6W3 813 aa17.76■□□□□ 0.43
RBFOX1-212ENST00000550418 PNMA8AQ86V59 439 aaPredicted RBP17.75■□□□□ 0.43
RBFOX1-212ENST00000550418 SECISBP2LQ93073 1101 aaKnown RBP17.75■□□□□ 0.43
RBFOX1-212ENST00000550418 TMOD3Q9NYL9 352 aa17.75■□□□□ 0.43
RBFOX1-212ENST00000550418 LRRC45Q96CN5 670 aa17.75■□□□□ 0.43
RBFOX1-212ENST00000550418 KAT6BQ8WYB5 2073 aa17.75■□□□□ 0.43
RBFOX1-212ENST00000550418 LTKP29376 864 aa17.75■□□□□ 0.43
RBFOX1-212ENST00000550418 LIG3P49916 1009 aa17.75■□□□□ 0.43
RBFOX1-212ENST00000550418 CCDC26Q8TAB7 109 aa17.75■□□□□ 0.43
RBFOX1-212ENST00000550418 KCNK9Q9NPC2 374 aa17.75■□□□□ 0.43
RBFOX1-212ENST00000550418 VWA3AA6NCI4 1184 aa17.75■□□□□ 0.43
RBFOX1-212ENST00000550418 MXRA7P84157 204 aa17.75■□□□□ 0.43
RBFOX1-212ENST00000550418 LONRF3Q496Y0 759 aa17.75■□□□□ 0.43
RBFOX1-212ENST00000550418 IFNL2Q8IZJ0 200 aa17.75■□□□□ 0.43
RBFOX1-212ENST00000550418 SLC39A6Q13433 755 aa17.74■□□□□ 0.43
RBFOX1-212ENST00000550418 FAM71BQ8TC56 605 aa17.74■□□□□ 0.43
RBFOX1-212ENST00000550418 BICC1Q9H694 974 aaKnown RBP17.74■□□□□ 0.43
RBFOX1-212ENST00000550418 STX8Q9UNK0 236 aa17.74■□□□□ 0.43
RBFOX1-212ENST00000550418 GNAQP50148 359 aa17.74■□□□□ 0.43
RBFOX1-212ENST00000550418 CUL4AQ13619 759 aa17.74■□□□□ 0.43
RBFOX1-212ENST00000550418 TNIP1Q15025 636 aa17.74■□□□□ 0.43
RBFOX1-212ENST00000550418 TERF2Q15554 542 aa17.74■□□□□ 0.43
RBFOX1-212ENST00000550418 DESI2Q9BSY9 194 aa17.74■□□□□ 0.43
RBFOX1-212ENST00000550418 PDE11AQ9HCR9 933 aa17.74■□□□□ 0.43
RBFOX1-212ENST00000550418 CDC25BP30305 580 aa17.74■□□□□ 0.43
RBFOX1-212ENST00000550418 ATP11AP98196 1134 aa17.74■□□□□ 0.43
RBFOX1-212ENST00000550418 PPFIBP2Q8ND30 876 aa17.74■□□□□ 0.43
RBFOX1-212ENST00000550418 BCAS4Q8TDM0 211 aa17.74■□□□□ 0.43
RBFOX1-212ENST00000550418 USP28Q96RU2 1077 aa17.74■□□□□ 0.43
RBFOX1-212ENST00000550418 C19orf44Q9H6X5 657 aa17.74■□□□□ 0.43
RBFOX1-212ENST00000550418 WWC3Q9ULE0 1092 aa17.74■□□□□ 0.43
RBFOX1-212ENST00000550418 MAGI2Q86UL8 1455 aa17.74■□□□□ 0.43
RBFOX1-212ENST00000550418 MCM7P33993 719 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms