RNA–Protein interactions for RNA: ENST00000549891.5

TROAP-211, Transcript of trophinin associated protein, humanhuman

TSL 1 (best)

Gene TROAP, Length 932 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-211ENST00000549891 BRCA2P51587 3418 aa16.96■□□□□ 0.31
TROAP-211ENST00000549891 IRF6O14896 467 aa16.96■□□□□ 0.31
TROAP-211ENST00000549891 GNRH1P01148 92 aa16.96■□□□□ 0.31
TROAP-211ENST00000549891 ALDH1L2Q3SY69 923 aa16.96■□□□□ 0.31
TROAP-211ENST00000549891 ZNF333Q96JL9 665 aa16.96■□□□□ 0.31
TROAP-211ENST00000549891 FBXO3Q9UK99 471 aa16.96■□□□□ 0.31
TROAP-211ENST00000549891 BTBD19C9JJ37 291 aa16.95■□□□□ 0.3
TROAP-211ENST00000549891 PPATQ06203 517 aa16.95■□□□□ 0.3
TROAP-211ENST00000549891 FAM151AQ8WW52 585 aa16.95■□□□□ 0.3
TROAP-211ENST00000549891 GNL3LQ9NVN8 582 aaKnown RBP16.95■□□□□ 0.3
TROAP-211ENST00000549891 HDAC5Q9UQL6 1122 aa16.95■□□□□ 0.3
TROAP-211ENST00000549891 PTCH2Q9Y6C5 1203 aa16.95■□□□□ 0.3
TROAP-211ENST00000549891 EN2P19622 333 aaPredicted RBP16.94■□□□□ 0.3
TROAP-211ENST00000549891 RFX5P48382 616 aaPredicted RBP16.94■□□□□ 0.3
TROAP-211ENST00000549891 PRMT2P55345 433 aa16.94■□□□□ 0.3
TROAP-211ENST00000549891 CAP1Q01518 475 aa16.94■□□□□ 0.3
TROAP-211ENST00000549891 UBTFL1P0CB47 393 aaPredicted RBP16.93■□□□□ 0.3
TROAP-211ENST00000549891 LACTBP83111 547 aaPredicted RBP16.93■□□□□ 0.3
TROAP-211ENST00000549891 SLFN5Q08AF3 891 aa16.93■□□□□ 0.3
TROAP-211ENST00000549891 SLC4A8Q2Y0W8 1093 aa16.93■□□□□ 0.3
TROAP-211ENST00000549891 MIGA2Q7L4E1 593 aa16.93■□□□□ 0.3
TROAP-211ENST00000549891 SMC4Q9NTJ3 1288 aa16.93■□□□□ 0.3
TROAP-211ENST00000549891 CEP126Q9P2H0 1117 aa16.93■□□□□ 0.3
TROAP-211ENST00000549891 MYH2Q9UKX2 1941 aa16.93■□□□□ 0.3
TROAP-211ENST00000549891 ZSWIM8A7E2V4 1837 aa16.92■□□□□ 0.3
TROAP-211ENST00000549891 CIAO1O76071 339 aa16.92■□□□□ 0.3
TROAP-211ENST00000549891 LDHBP07195 334 aaKnown RBP16.92■□□□□ 0.3
TROAP-211ENST00000549891 ATP2B3Q16720 1220 aa16.92■□□□□ 0.3
TROAP-211ENST00000549891 ATG9AQ7Z3C6 839 aa16.92■□□□□ 0.3
TROAP-211ENST00000549891 DAGLAQ9Y4D2 1042 aa16.92■□□□□ 0.3
TROAP-211ENST00000549891 DOCK2Q92608 1830 aa16.91■□□□□ 0.3
TROAP-211ENST00000549891 SEMA3EO15041 775 aa16.91■□□□□ 0.3
TROAP-211ENST00000549891 INPP5BP32019 993 aa16.91■□□□□ 0.3
TROAP-211ENST00000549891 TCP10Q12799 353 aa16.91■□□□□ 0.3
TROAP-211ENST00000549891 CDC42EP5Q6NZY7 148 aa16.91■□□□□ 0.3
TROAP-211ENST00000549891 ANKRD23Q86SG2 305 aa16.91■□□□□ 0.3
TROAP-211ENST00000549891 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.91■□□□□ 0.3
TROAP-211ENST00000549891 ZNF112Q9UJU3 913 aa16.91■□□□□ 0.3
TROAP-211ENST00000549891 DENND2AQ9ULE3 1009 aa16.91■□□□□ 0.3
TROAP-211ENST00000549891 SALL1Q9NSC2 1324 aa16.91■□□□□ 0.3
TROAP-211ENST00000549891 PRDX5P30044 214 aa16.9■□□□□ 0.3
TROAP-211ENST00000549891 DIXDC1Q155Q3 683 aa16.9■□□□□ 0.3
TROAP-211ENST00000549891 HABP4Q5JVS0 413 aaKnown RBP16.9■□□□□ 0.3
TROAP-211ENST00000549891 ZGPATQ8N5A5 531 aaKnown RBP16.9■□□□□ 0.3
TROAP-211ENST00000549891 SIL1Q9H173 461 aa16.9■□□□□ 0.3
TROAP-211ENST00000549891 KCNH4Q9UQ05 1017 aa16.9■□□□□ 0.3
TROAP-211ENST00000549891 PDHXO00330 501 aa16.89■□□□□ 0.29
TROAP-211ENST00000549891 CT47B1P0C2W7 299 aaPredicted RBP16.89■□□□□ 0.29
TROAP-211ENST00000549891 HOXD10P28358 340 aa16.89■□□□□ 0.29
TROAP-211ENST00000549891 IL15P40933 162 aaPredicted RBP16.89■□□□□ 0.29
TROAP-211ENST00000549891 NOL9Q5SY16 702 aaKnown RBP16.89■□□□□ 0.29
TROAP-211ENST00000549891 C17orf99Q6UX52 265 aa16.89■□□□□ 0.29
TROAP-211ENST00000549891 ARHGAP39Q9C0H5 1083 aa16.89■□□□□ 0.29
TROAP-211ENST00000549891 USP40Q9NVE5 1235 aa16.89■□□□□ 0.29
TROAP-211ENST00000549891 ZBTB22O15209 634 aa16.88■□□□□ 0.29
TROAP-211ENST00000549891 NFIAQ12857 509 aa16.88■□□□□ 0.29
TROAP-211ENST00000549891 SH3TC2Q8TF17 1288 aa16.88■□□□□ 0.29
TROAP-211ENST00000549891 MGAMO43451 1857 aa16.88■□□□□ 0.29
TROAP-211ENST00000549891 CXCL11O14625 94 aa16.87■□□□□ 0.29
TROAP-211ENST00000549891 SLF2Q8IX21 1173 aa16.87■□□□□ 0.29
TROAP-211ENST00000549891 API5Q9BZZ5 524 aaKnown RBP16.87■□□□□ 0.29
TROAP-211ENST00000549891 FAM198AQ9UFP1 575 aa16.87■□□□□ 0.29
TROAP-211ENST00000549891 CPA4Q9UI42 421 aa16.87■□□□□ 0.29
TROAP-211ENST00000549891 FMNL1O95466 1100 aaPredicted RBP16.86■□□□□ 0.29
TROAP-211ENST00000549891 MYCP01106 439 aaPredicted RBP16.86■□□□□ 0.29
TROAP-211ENST00000549891 PSMC4P43686 418 aa16.86■□□□□ 0.29
TROAP-211ENST00000549891 RAET1EQ8TD07 263 aa16.86■□□□□ 0.29
TROAP-211ENST00000549891 PARK7Q99497 189 aaKnown RBP16.86■□□□□ 0.29
TROAP-211ENST00000549891 SRRDQ9UH36 339 aa16.86■□□□□ 0.29
TROAP-211ENST00000549891 ENTPD3O75355 529 aa16.85■□□□□ 0.29
TROAP-211ENST00000549891 PHKA1P46020 1223 aa16.85■□□□□ 0.29
TROAP-211ENST00000549891 SPTY2D1Q68D10 685 aaPredicted RBP16.85■□□□□ 0.29
TROAP-211ENST00000549891 CCDC102BQ68D86 513 aa16.85■□□□□ 0.29
TROAP-211ENST00000549891 FASTKD5Q7L8L6 764 aaKnown RBP16.85■□□□□ 0.29
TROAP-211ENST00000549891 DZIP1Q86YF9 867 aaKnown RBP16.85■□□□□ 0.29
TROAP-211ENST00000549891 NKX2-3Q8TAU0 364 aa16.85■□□□□ 0.29
TROAP-211ENST00000549891 CDCA7LQ96GN5 454 aa16.85■□□□□ 0.29
TROAP-211ENST00000549891 IDI2Q9BXS1 227 aa16.85■□□□□ 0.29
TROAP-211ENST00000549891 COPRSQ9NQ92 184 aa16.85■□□□□ 0.29
TROAP-211ENST00000549891 PICK1Q9NRD5 415 aa16.85■□□□□ 0.29
TROAP-211ENST00000549891 NOB1Q9ULX3 412 aaKnown RBP16.85■□□□□ 0.29
TROAP-211ENST00000549891 LRRFIP2Q9Y608 721 aaKnown RBP16.85■□□□□ 0.29
TROAP-211ENST00000549891 PDS5AQ29RF7 1337 aaKnown RBP16.85■□□□□ 0.29
TROAP-211ENST00000549891 DOCK1Q14185 1865 aa16.84■□□□□ 0.29
TROAP-211ENST00000549891 PTPRFP10586 1907 aa16.84■□□□□ 0.29
TROAP-211ENST00000549891 RGS3P49796 1198 aa16.84■□□□□ 0.29
TROAP-211ENST00000549891 ZSCAN29Q8IWY8 852 aaPredicted RBP16.84■□□□□ 0.29
TROAP-211ENST00000549891 TRMT2AQ8IZ69 625 aaKnown RBP16.84■□□□□ 0.29
TROAP-211ENST00000549891 TRIM47Q96LD4 638 aa16.84■□□□□ 0.29
TROAP-211ENST00000549891 ADGRA2Q96PE1 1338 aa16.84■□□□□ 0.29
TROAP-211ENST00000549891 GAKO14976 1311 aa16.83■□□□□ 0.28
TROAP-211ENST00000549891 ECM2O94769 699 aaPredicted RBP16.83■□□□□ 0.28
TROAP-211ENST00000549891 OSBPP22059 807 aa16.83■□□□□ 0.28
TROAP-211ENST00000549891 GRK4P32298 578 aa16.83■□□□□ 0.28
TROAP-211ENST00000549891 FCGRTP55899 365 aa16.83■□□□□ 0.28
TROAP-211ENST00000549891 MOGSQ13724 837 aa16.83■□□□□ 0.28
TROAP-211ENST00000549891 MYPNQ86TC9 1320 aa16.83■□□□□ 0.28
TROAP-211ENST00000549891 SCYL3Q8IZE3 742 aa16.83■□□□□ 0.28
TROAP-211ENST00000549891 ABCF2Q9UG63 623 aa16.83■□□□□ 0.28
TROAP-211ENST00000549891 PA2G4Q9UQ80 394 aaKnown RBP16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 141.3 ms