RNA–Protein interactions for RNA: ENST00000545668.5

DDX11-229, Transcript of DEAD/H-box helicase 11, human

TSL 1 (best) BASIC

Gene DDX11, Length 3,751 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX11-229	ENST00000545668	NTSR2	O95665	410 aa		11.26	□□□□□ -0.61
DDX11-229	ENST00000545668	ARID4A	P29374	1257 aa	Predicted RBP	11.26	□□□□□ -0.61
DDX11-229	ENST00000545668	CEP135	Q66GS9	1140 aa		11.26	□□□□□ -0.61
DDX11-229	ENST00000545668	AOPEP	Q8N6M6	819 aa		11.26	□□□□□ -0.61
DDX11-229	ENST00000545668	NCOA7	Q8NI08	942 aa		11.26	□□□□□ -0.61
DDX11-229	ENST00000545668	LLPH	Q9BRT6	129 aa	Known RBP	11.26	□□□□□ -0.61
DDX11-229	ENST00000545668	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	11.26	□□□□□ -0.61
DDX11-229	ENST00000545668		A0A1B0GVL5	298 aa		11.26	□□□□□ -0.61
DDX11-229	ENST00000545668	PDE6A	P16499	860 aa		11.26	□□□□□ -0.61
DDX11-229	ENST00000545668	MAP3K12	Q12852	859 aa		11.26	□□□□□ -0.61
DDX11-229	ENST00000545668	UBE3C	Q15386	1083 aa		11.26	□□□□□ -0.61
DDX11-229	ENST00000545668	CEP57L1	Q8IYX8	460 aa		11.26	□□□□□ -0.61
DDX11-229	ENST00000545668	SLIT2	O94813	1529 aa		11.26	□□□□□ -0.61
DDX11-229	ENST00000545668	SPEF2	Q9C093	1822 aa		11.26	□□□□□ -0.61
DDX11-229	ENST00000545668	PTPDC1	A2A3K4	754 aa		11.26	□□□□□ -0.61
DDX11-229	ENST00000545668	FOXP2	O15409	715 aa		11.26	□□□□□ -0.61
DDX11-229	ENST00000545668	PRC1	O43663	620 aa		11.26	□□□□□ -0.61
DDX11-229	ENST00000545668	FGFR2	P21802	821 aa		11.26	□□□□□ -0.61
DDX11-229	ENST00000545668	ZNF75D	P51815	510 aa		11.26	□□□□□ -0.61
DDX11-229	ENST00000545668	TPM4	P67936	248 aa		11.26	□□□□□ -0.61
DDX11-229	ENST00000545668	C10orf67	Q8IYJ2	551 aa		11.26	□□□□□ -0.61
DDX11-229	ENST00000545668	WWC3	Q9ULE0	1092 aa		11.26	□□□□□ -0.61
DDX11-229	ENST00000545668	PDIA3	P30101	505 aa	Known RBP	11.25	□□□□□ -0.61
DDX11-229	ENST00000545668	RASGRF1	Q13972	1273 aa		11.25	□□□□□ -0.61
DDX11-229	ENST00000545668	LINC00116	Q8NCU8	138 aa		11.25	□□□□□ -0.61
DDX11-229	ENST00000545668	CDC5L	Q99459	802 aa	Known RBP	11.25	□□□□□ -0.61
DDX11-229	ENST00000545668	BCAM	P50895	628 aa		11.25	□□□□□ -0.61
DDX11-229	ENST00000545668	PDILT	Q8N807	584 aa		11.25	□□□□□ -0.61
DDX11-229	ENST00000545668	NSUN7	Q8NE18	718 aa	Known RBP	11.25	□□□□□ -0.61
DDX11-229	ENST00000545668	CACTIN	Q8WUQ7	758 aa	Known RBP	11.25	□□□□□ -0.61
DDX11-229	ENST00000545668	ZNF274	Q96GC6	653 aa	Predicted RBP	11.25	□□□□□ -0.61
DDX11-229	ENST00000545668	ZNF396	Q96N95	335 aa	Predicted RBP	11.25	□□□□□ -0.61
DDX11-229	ENST00000545668	GPHN	Q9NQX3	736 aa	Predicted RBP	11.25	□□□□□ -0.61
DDX11-229	ENST00000545668	VPS72	Q15906	364 aa		11.25	□□□□□ -0.61
DDX11-229	ENST00000545668	CLEC4G	Q6UXB4	293 aa		11.25	□□□□□ -0.61
DDX11-229	ENST00000545668	CCDC144CP	Q8IYA2	1237 aa		11.25	□□□□□ -0.61
DDX11-229	ENST00000545668	MAGEB6	Q8N7X4	407 aa		11.25	□□□□□ -0.61
DDX11-229	ENST00000545668	AGXT2	Q9BYV1	514 aa		11.25	□□□□□ -0.61
DDX11-229	ENST00000545668	NAT10	Q9H0A0	1025 aa	Known RBP	11.25	□□□□□ -0.61
DDX11-229	ENST00000545668	CHRND	Q07001	517 aa		11.24	□□□□□ -0.61
DDX11-229	ENST00000545668	SMIM5	Q71RC9	77 aa		11.24	□□□□□ -0.61
DDX11-229	ENST00000545668	CCDC82	Q8N4S0	544 aa		11.24	□□□□□ -0.61
DDX11-229	ENST00000545668	CLSTN2	Q9H4D0	955 aa		11.24	□□□□□ -0.61
DDX11-229	ENST00000545668	CCDC69	A6NI79	296 aa		11.24	□□□□□ -0.61
DDX11-229	ENST00000545668	ERFE	Q4G0M1	354 aa		11.24	□□□□□ -0.61
DDX11-229	ENST00000545668	TMC6	Q7Z403	805 aa		11.24	□□□□□ -0.61
DDX11-229	ENST00000545668	ZNF710	Q8N1W2	664 aa		11.24	□□□□□ -0.61
DDX11-229	ENST00000545668	SMARCC2	Q8TAQ2	1214 aa		11.24	□□□□□ -0.61
DDX11-229	ENST00000545668	SECISBP2L	Q93073	1101 aa	Known RBP	11.24	□□□□□ -0.61
DDX11-229	ENST00000545668	IQSEC3	Q9UPP2	1182 aa	Predicted RBP	11.24	□□□□□ -0.61
DDX11-229	ENST00000545668	ANKRD36C	Q5JPF3	1778 aa		11.24	□□□□□ -0.61
DDX11-229	ENST00000545668	KLF18	A0A0U1RQI7	1052 aa		11.24	□□□□□ -0.61
DDX11-229	ENST00000545668	FAM182B	Q5T319	152 aa		11.24	□□□□□ -0.61
DDX11-229	ENST00000545668	TAF3	Q5VWG9	929 aa		11.24	□□□□□ -0.61
DDX11-229	ENST00000545668	ZSCAN16	Q9H4T2	348 aa	Predicted RBP	11.24	□□□□□ -0.61
DDX11-229	ENST00000545668	LRP2BP	Q9P2M1	347 aa		11.24	□□□□□ -0.61
DDX11-229	ENST00000545668	WNK3	Q9BYP7	1800 aa		11.24	□□□□□ -0.61
DDX11-229	ENST00000545668	MYH3	P11055	1940 aa		11.23	□□□□□ -0.61
DDX11-229	ENST00000545668	NRAP	Q86VF7	1730 aa		11.23	□□□□□ -0.61
DDX11-229	ENST00000545668	GOLGA8B	A8MQT2	603 aa		11.23	□□□□□ -0.61
DDX11-229	ENST00000545668	DHX16	O60231	1041 aa	Known RBP	11.23	□□□□□ -0.61
DDX11-229	ENST00000545668	MARCKS	P29966	332 aa	Predicted RBP	11.23	□□□□□ -0.61
DDX11-229	ENST00000545668	PTPN21	Q16825	1174 aa		11.23	□□□□□ -0.61
DDX11-229	ENST00000545668	PTF1A	Q7RTS3	328 aa		11.23	□□□□□ -0.61
DDX11-229	ENST00000545668	ANKRD18A	Q8IVF6	992 aa		11.23	□□□□□ -0.61
DDX11-229	ENST00000545668	USP21	Q9UK80	565 aa		11.23	□□□□□ -0.61
DDX11-229	ENST00000545668	CTDNEP1	O95476	244 aa		11.23	□□□□□ -0.61
DDX11-229	ENST00000545668	SERPINC1	P01008	464 aa		11.23	□□□□□ -0.61
DDX11-229	ENST00000545668	RXRA	P19793	462 aa		11.23	□□□□□ -0.61
DDX11-229	ENST00000545668	STX1A	Q16623	288 aa		11.23	□□□□□ -0.61
DDX11-229	ENST00000545668	NFXL1	Q6ZNB6	911 aa		11.23	□□□□□ -0.61
DDX11-229	ENST00000545668	PGBD1	Q96JS3	809 aa		11.23	□□□□□ -0.61
DDX11-229	ENST00000545668	ANO10	Q9NW15	660 aa		11.23	□□□□□ -0.61
DDX11-229	ENST00000545668	LMOD1	P29536	600 aa	Predicted RBP	11.23	□□□□□ -0.61
DDX11-229	ENST00000545668	C11orf57	Q6ZUT1	292 aa	Predicted RBP	11.23	□□□□□ -0.61
DDX11-229	ENST00000545668	MB21D2	Q8IYB1	491 aa	Predicted RBP	11.23	□□□□□ -0.61
DDX11-229	ENST00000545668	USP28	Q96RU2	1077 aa		11.23	□□□□□ -0.61
DDX11-229	ENST00000545668	MBD4	O95243	580 aa		11.22	□□□□□ -0.61
DDX11-229	ENST00000545668	IRX5	P78411	483 aa	Predicted RBP	11.22	□□□□□ -0.61
DDX11-229	ENST00000545668	VPS37D	Q86XT2	251 aa		11.22	□□□□□ -0.61
DDX11-229	ENST00000545668	C8orf76	Q96K31	380 aa		11.22	□□□□□ -0.61
DDX11-229	ENST00000545668	NAPB	Q9H115	298 aa		11.22	□□□□□ -0.61
DDX11-229	ENST00000545668	ABCF2	Q9UG63	623 aa		11.22	□□□□□ -0.61
DDX11-229	ENST00000545668	ELP1	O95163	1332 aa		11.22	□□□□□ -0.61
DDX11-229	ENST00000545668	ZPR1	O75312	459 aa		11.22	□□□□□ -0.61
DDX11-229	ENST00000545668	STRBP	Q96SI9	672 aa	Known RBP	11.22	□□□□□ -0.61
DDX11-229	ENST00000545668	GNPAT	O15228	680 aa		11.22	□□□□□ -0.61
DDX11-229	ENST00000545668	REST	Q13127	1097 aa		11.22	□□□□□ -0.61
DDX11-229	ENST00000545668	CCDC144B	Q3MJ40	725 aa		11.22	□□□□□ -0.61
DDX11-229	ENST00000545668	UTP14C	Q5TAP6	766 aa	Known RBP	11.22	□□□□□ -0.61
DDX11-229	ENST00000545668	NAA16	Q6N069	864 aa	Predicted RBP	11.22	□□□□□ -0.61
DDX11-229	ENST00000545668	KIF18A	Q8NI77	898 aa		11.22	□□□□□ -0.61
DDX11-229	ENST00000545668	ARMT1	Q9H993	441 aa		11.22	□□□□□ -0.61
DDX11-229	ENST00000545668	MYH14	Q7Z406	1995 aa	Known RBP	11.21	□□□□□ -0.61
DDX11-229	ENST00000545668	SFPQ	P23246	707 aa	Known RBP eCLIP	11.21	□□□□□ -0.61
DDX11-229	ENST00000545668	MNS1	Q8NEH6	495 aa		11.21	□□□□□ -0.61
DDX11-229	ENST00000545668	SETDB2	Q96T68	719 aa		11.21	□□□□□ -0.61
DDX11-229	ENST00000545668	GNL3L	Q9NVN8	582 aa	Known RBP	11.21	□□□□□ -0.61
DDX11-229	ENST00000545668	TCRBV5S4A2T	A0A5A2	114 aa		11.21	□□□□□ -0.61
DDX11-229	ENST00000545668	RRP12	Q5JTH9	1297 aa	Known RBP	11.21	□□□□□ -0.61

Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms