RNA–Protein interactions for RNA: ENST00000545305.1

SCARB1-209, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 851 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-209ENST00000545305 COL4A5P29400 1685 aa16.4■□□□□ 0.22
SCARB1-209ENST00000545305 GSG1L2A8MUP6 293 aa16.4■□□□□ 0.22
SCARB1-209ENST00000545305 FGAP02671 866 aa16.4■□□□□ 0.22
SCARB1-209ENST00000545305 BTDP43251 543 aa16.4■□□□□ 0.22
SCARB1-209ENST00000545305 RASSF7Q02833 373 aa16.4■□□□□ 0.22
SCARB1-209ENST00000545305 TSGA10IPQ3SY00 556 aa16.4■□□□□ 0.22
SCARB1-209ENST00000545305 IFNL3Q8IZI9 196 aa16.4■□□□□ 0.22
SCARB1-209ENST00000545305 TEKT1Q969V4 418 aa16.4■□□□□ 0.22
SCARB1-209ENST00000545305 FAM163AQ96GL9 167 aaPredicted RBP16.4■□□□□ 0.22
SCARB1-209ENST00000545305 MXD3Q9BW11 206 aa16.4■□□□□ 0.22
SCARB1-209ENST00000545305 TM6SF1Q9BZW5 370 aa16.4■□□□□ 0.22
SCARB1-209ENST00000545305 KCNQ5Q9NR82 932 aa16.4■□□□□ 0.22
SCARB1-209ENST00000545305 ZNF213O14771 459 aa16.39■□□□□ 0.21
SCARB1-209ENST00000545305 PRKAB2O43741 272 aa16.39■□□□□ 0.21
SCARB1-209ENST00000545305 CYP21A2P08686 494 aa16.39■□□□□ 0.21
SCARB1-209ENST00000545305 PPP4CP60510 307 aa16.39■□□□□ 0.21
SCARB1-209ENST00000545305 GIMAP6Q6P9H5 292 aa16.39■□□□□ 0.21
SCARB1-209ENST00000545305 EPB41L4AQ9HCS5 686 aaPredicted RBP16.39■□□□□ 0.21
SCARB1-209ENST00000545305 DAGLAQ9Y4D2 1042 aa16.39■□□□□ 0.21
SCARB1-209ENST00000545305 GPR75-ASB3A0A0A6YYF3 556 aa16.38■□□□□ 0.21
SCARB1-209ENST00000545305 RAD17O75943 681 aa16.38■□□□□ 0.21
SCARB1-209ENST00000545305 CASTP20810 708 aaKnown RBP16.38■□□□□ 0.21
SCARB1-209ENST00000545305 USP5P45974 858 aa16.38■□□□□ 0.21
SCARB1-209ENST00000545305 SCNN1DP51172 638 aa16.38■□□□□ 0.21
SCARB1-209ENST00000545305 NEK4P51957 841 aa16.38■□□□□ 0.21
SCARB1-209ENST00000545305 HDLBPQ00341 1268 aaKnown RBP16.38■□□□□ 0.21
SCARB1-209ENST00000545305 RSBN1LQ6PCB5 846 aaPredicted RBP16.38■□□□□ 0.21
SCARB1-209ENST00000545305 HHIPL2Q6UWX4 724 aa16.38■□□□□ 0.21
SCARB1-209ENST00000545305 ARHGAP27Q6ZUM4 889 aa16.38■□□□□ 0.21
SCARB1-209ENST00000545305 KIAA0825Q8IV33 1275 aa16.38■□□□□ 0.21
SCARB1-209ENST00000545305 SDR42E1Q8WUS8 393 aa16.38■□□□□ 0.21
SCARB1-209ENST00000545305 SNX21Q969T3 373 aa16.38■□□□□ 0.21
SCARB1-209ENST00000545305 ATP8A2Q9NTI2 1148 aa16.38■□□□□ 0.21
SCARB1-209ENST00000545305 CYP46A1Q9Y6A2 500 aa16.38■□□□□ 0.21
SCARB1-209ENST00000545305 PSMD14O00487 310 aa16.37■□□□□ 0.21
SCARB1-209ENST00000545305 VIL1P09327 827 aaKnown RBP16.37■□□□□ 0.21
SCARB1-209ENST00000545305 HAND2P61296 217 aa16.37■□□□□ 0.21
SCARB1-209ENST00000545305 TNIP1Q15025 636 aa16.37■□□□□ 0.21
SCARB1-209ENST00000545305 CIAPIN1Q6FI81 312 aa16.37■□□□□ 0.21
SCARB1-209ENST00000545305 BLOC1S2Q6QNY1 142 aa16.37■□□□□ 0.21
SCARB1-209ENST00000545305 SH3RF3Q8TEJ3 882 aaPredicted RBP16.37■□□□□ 0.21
SCARB1-209ENST00000545305 UPF3BQ9BZI7 483 aaKnown RBP16.37■□□□□ 0.21
SCARB1-209ENST00000545305 HMGB1P09429 215 aaKnown RBP16.36■□□□□ 0.21
SCARB1-209ENST00000545305 CRKP46108 304 aa16.36■□□□□ 0.21
SCARB1-209ENST00000545305 ADCK5Q3MIX3 580 aa16.36■□□□□ 0.21
SCARB1-209ENST00000545305 AMOTL1Q8IY63 956 aa16.36■□□□□ 0.21
SCARB1-209ENST00000545305 TEX11Q8IYF3 940 aa16.36■□□□□ 0.21
SCARB1-209ENST00000545305 NEK1Q96PY6 1258 aa16.36■□□□□ 0.21
SCARB1-209ENST00000545305 MRIQ9BWK5 157 aa16.36■□□□□ 0.21
SCARB1-209ENST00000545305 ZSWIM6Q9HCJ5 1215 aa16.36■□□□□ 0.21
SCARB1-209ENST00000545305 HDAC9Q9UKV0 1011 aa16.36■□□□□ 0.21
SCARB1-209ENST00000545305 TIAM2Q8IVF5 1701 aa16.36■□□□□ 0.21
SCARB1-209ENST00000545305 NAV1Q8NEY1 1877 aa16.35■□□□□ 0.21
SCARB1-209ENST00000545305 E7EWF7 191 aa16.35■□□□□ 0.21
SCARB1-209ENST00000545305 MCM2P49736 904 aa16.35■□□□□ 0.21
SCARB1-209ENST00000545305 RBM5P52756 815 aaKnown RBP eCLIP16.35■□□□□ 0.21
SCARB1-209ENST00000545305 EIF6P56537 245 aaKnown RBP16.35■□□□□ 0.21
SCARB1-209ENST00000545305 TRDNQ13061 729 aa16.35■□□□□ 0.21
SCARB1-209ENST00000545305 RUFY3Q7L099 469 aa16.35■□□□□ 0.21
SCARB1-209ENST00000545305 RALYLQ86SE5 291 aaKnown RBP16.35■□□□□ 0.21
SCARB1-209ENST00000545305 AGBL3Q8NEM8 1001 aa16.35■□□□□ 0.21
SCARB1-209ENST00000545305 TBC1D2Q9BYX2 928 aa16.35■□□□□ 0.21
SCARB1-209ENST00000545305 ARPP21Q9UBL0 812 aaPredicted RBP16.35■□□□□ 0.21
SCARB1-209ENST00000545305 SERPINA10Q9UK55 444 aa16.35■□□□□ 0.21
SCARB1-209ENST00000545305 TAF6LQ9Y6J9 622 aa16.35■□□□□ 0.21
SCARB1-209ENST00000545305 LAMB1P07942 1786 aa16.35■□□□□ 0.21
SCARB1-209ENST00000545305 LMNB1P20700 586 aa16.34■□□□□ 0.21
SCARB1-209ENST00000545305 CXCL9Q07325 125 aa16.34■□□□□ 0.21
SCARB1-209ENST00000545305 OGFOD1Q8N543 542 aa16.34■□□□□ 0.21
SCARB1-209ENST00000545305 ZDHHC15Q96MV8 337 aa16.34■□□□□ 0.21
SCARB1-209ENST00000545305 DCP1AQ9NPI6 582 aaPredicted RBP16.34■□□□□ 0.21
SCARB1-209ENST00000545305 PDRG1Q9NUG6 133 aa16.34■□□□□ 0.21
SCARB1-209ENST00000545305 ADAMTSL1Q8N6G6 1762 aa16.33■□□□□ 0.21
SCARB1-209ENST00000545305 K7ELQ4 463 aaPredicted RBP16.33■□□□□ 0.2
SCARB1-209ENST00000545305 RPS6KB1P23443 525 aa16.33■□□□□ 0.2
SCARB1-209ENST00000545305 PPARAQ07869 468 aa16.33■□□□□ 0.2
SCARB1-209ENST00000545305 STOX1Q6ZVD7 989 aa16.33■□□□□ 0.2
SCARB1-209ENST00000545305 NCOA7Q8NI08 942 aa16.33■□□□□ 0.2
SCARB1-209ENST00000545305 TGFBRAP1Q8WUH2 860 aa16.33■□□□□ 0.2
SCARB1-209ENST00000545305 RNF41Q9H4P4 317 aaPredicted RBP16.33■□□□□ 0.2
SCARB1-209ENST00000545305 MCM9Q9NXL9 1143 aa16.33■□□□□ 0.2
SCARB1-209ENST00000545305 BAZ2AQ9UIF9 1905 aaKnown RBP16.33■□□□□ 0.2
SCARB1-209ENST00000545305 MINDY4BA8MYZ0 360 aa16.32■□□□□ 0.2
SCARB1-209ENST00000545305 SLC3A2P08195 630 aaKnown RBP16.32■□□□□ 0.2
SCARB1-209ENST00000545305 CPA1P15085 419 aa16.32■□□□□ 0.2
SCARB1-209ENST00000545305 RPS12P25398 132 aaKnown RBP16.32■□□□□ 0.2
SCARB1-209ENST00000545305 RHBDL3P58872 404 aa16.32■□□□□ 0.2
SCARB1-209ENST00000545305 SBK1Q52WX2 424 aa16.32■□□□□ 0.2
SCARB1-209ENST00000545305 TBC1D10CQ8IV04 446 aa16.32■□□□□ 0.2
SCARB1-209ENST00000545305 GMLQ99445 158 aa16.32■□□□□ 0.2
SCARB1-209ENST00000545305 CNNM2Q9H8M5 875 aa16.32■□□□□ 0.2
SCARB1-209ENST00000545305 USP40Q9NVE5 1235 aa16.32■□□□□ 0.2
SCARB1-209ENST00000545305 ANAPC4Q9UJX5 808 aa16.32■□□□□ 0.2
SCARB1-209ENST00000545305 DICER1Q9UPY3 1922 aaKnown RBP16.31■□□□□ 0.2
SCARB1-209ENST00000545305 CDK5RAP2Q96SN8 1893 aa16.31■□□□□ 0.2
SCARB1-209ENST00000545305 FOCADQ5VW36 1801 aa16.31■□□□□ 0.2
SCARB1-209ENST00000545305 USP17L12C9JPN9 530 aa16.31■□□□□ 0.2
SCARB1-209ENST00000545305 USP17L21D6R901 530 aa16.31■□□□□ 0.2
SCARB1-209ENST00000545305 FZD9O00144 591 aa16.31■□□□□ 0.2
SCARB1-209ENST00000545305 CD2BP2O95400 341 aaKnown RBP16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms