RNA–Protein interactions for RNA: ENST00000545266.1

COPA-206, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 2

Gene COPA, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-206ENST00000545266 CCDC86Q9H6F5 360 aaKnown RBP9.24□□□□□ -0.93
COPA-206ENST00000545266 KRBA1A5PL33 1030 aa9.23□□□□□ -0.93
COPA-206ENST00000545266 ZNF862O60290 1169 aa9.23□□□□□ -0.93
COPA-206ENST00000545266 RACK1P63244 317 aaKnown RBP9.23□□□□□ -0.93
COPA-206ENST00000545266 ADGRE1Q14246 886 aa9.23□□□□□ -0.93
COPA-206ENST00000545266 KIF4BQ2VIQ3 1234 aa9.23□□□□□ -0.93
COPA-206ENST00000545266 TRIM42Q8IWZ5 723 aa9.23□□□□□ -0.93
COPA-206ENST00000545266 GAL3ST3Q96A11 431 aa9.23□□□□□ -0.93
COPA-206ENST00000545266 USP26Q9BXU7 913 aa9.23□□□□□ -0.93
COPA-206ENST00000545266 TLR6Q9Y2C9 796 aa9.23□□□□□ -0.93
COPA-206ENST00000545266 MAP3K11Q16584 847 aa9.22□□□□□ -0.93
COPA-206ENST00000545266 SMG8Q8ND04 991 aaKnown RBP9.22□□□□□ -0.93
COPA-206ENST00000545266 TGIF2Q9GZN2 237 aa9.22□□□□□ -0.93
COPA-206ENST00000545266 GREM1O60565 184 aa9.21□□□□□ -0.94
COPA-206ENST00000545266 APBA3O96018 575 aa9.21□□□□□ -0.94
COPA-206ENST00000545266 GBP2P32456 591 aaPredicted RBP9.21□□□□□ -0.94
COPA-206ENST00000545266 CAMK2GQ13555 558 aaPredicted RBP9.21□□□□□ -0.94
COPA-206ENST00000545266 ZNF394Q53GI3 561 aa9.21□□□□□ -0.94
COPA-206ENST00000545266 C9orf131Q5VYM1 1079 aa9.21□□□□□ -0.94
COPA-206ENST00000545266 MPRIPQ6WCQ1 1025 aa9.21□□□□□ -0.94
COPA-206ENST00000545266 ACAD11Q709F0 780 aa9.21□□□□□ -0.94
COPA-206ENST00000545266 USP48Q86UV5 1035 aa9.21□□□□□ -0.94
COPA-206ENST00000545266 ZNF654Q8IZM8 581 aa9.21□□□□□ -0.94
COPA-206ENST00000545266 RNF208Q9H0X6 261 aa9.21□□□□□ -0.94
COPA-206ENST00000545266 ADAMTS1Q9UHI8 967 aa9.21□□□□□ -0.94
COPA-206ENST00000545266 PCDHGC5Q9Y5F6 944 aa9.21□□□□□ -0.94
COPA-206ENST00000545266 PF4P02776 101 aa9.2□□□□□ -0.94
COPA-206ENST00000545266 MBTPS1Q14703 1052 aa9.2□□□□□ -0.94
COPA-206ENST00000545266 MAP1SQ66K74 1059 aaPredicted RBP9.2□□□□□ -0.94
COPA-206ENST00000545266 WDR18Q9BV38 432 aa9.2□□□□□ -0.94
COPA-206ENST00000545266 RUSC1Q9BVN2 902 aa9.2□□□□□ -0.94
COPA-206ENST00000545266 AKTIPQ9H8T0 292 aa9.2□□□□□ -0.94
COPA-206ENST00000545266 CBX8Q9HC52 389 aa9.2□□□□□ -0.94
COPA-206ENST00000545266 PCDHB5Q9Y5E4 795 aa9.2□□□□□ -0.94
COPA-206ENST00000545266 FAM221AA4D161 298 aa9.19□□□□□ -0.94
COPA-206ENST00000545266 AOC2O75106 756 aa9.19□□□□□ -0.94
COPA-206ENST00000545266 TIAF1O95411 115 aa9.19□□□□□ -0.94
COPA-206ENST00000545266 EIF4A3P38919 411 aaKnown RBP9.19□□□□□ -0.94
COPA-206ENST00000545266 RASSF7Q02833 373 aa9.19□□□□□ -0.94
COPA-206ENST00000545266 PTPN11Q06124 597 aaPredicted RBP9.19□□□□□ -0.94
COPA-206ENST00000545266 FBXL19Q6PCT2 694 aa9.19□□□□□ -0.94
COPA-206ENST00000545266 GPBAR1Q8TDU6 330 aa9.19□□□□□ -0.94
COPA-206ENST00000545266 KCNB2Q92953 911 aa9.19□□□□□ -0.94
COPA-206ENST00000545266 WDR89Q96FK6 387 aaPredicted RBP9.19□□□□□ -0.94
COPA-206ENST00000545266 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.19□□□□□ -0.94
COPA-206ENST00000545266 NOS3P29474 1203 aa9.18□□□□□ -0.94
COPA-206ENST00000545266 HNRNPUQ00839 825 aaKnown RBP eCLIP9.18□□□□□ -0.94
COPA-206ENST00000545266 ANKRD34AQ69YU3 496 aa9.18□□□□□ -0.94
COPA-206ENST00000545266 CD163Q86VB7 1156 aa9.18□□□□□ -0.94
COPA-206ENST00000545266 WFDC12Q8WWY7 111 aa9.18□□□□□ -0.94
COPA-206ENST00000545266 MIR1-1HGQ9H1L0 117 aa9.18□□□□□ -0.94
COPA-206ENST00000545266 GSX1Q9H4S2 264 aaPredicted RBP9.18□□□□□ -0.94
COPA-206ENST00000545266 ROBO2Q9HCK4 1378 aa9.18□□□□□ -0.94
COPA-206ENST00000545266 MINDY4BA8MYZ0 360 aa9.17□□□□□ -0.94
COPA-206ENST00000545266 F6X3S4 739 aa9.17□□□□□ -0.94
COPA-206ENST00000545266 CILPO75339 1184 aa9.17□□□□□ -0.94
COPA-206ENST00000545266 ERCC5P28715 1186 aaPredicted RBP9.17□□□□□ -0.94
COPA-206ENST00000545266 ZC3H12AQ5D1E8 599 aaKnown RBP9.17□□□□□ -0.94
COPA-206ENST00000545266 DZIP1LQ8IYY4 767 aaKnown RBP9.17□□□□□ -0.94
COPA-206ENST00000545266 ZNF296Q8WUU4 475 aaPredicted RBP9.17□□□□□ -0.94
COPA-206ENST00000545266 GATAD2BQ8WXI9 593 aa9.17□□□□□ -0.94
COPA-206ENST00000545266 LRRC3Q9BY71 257 aa9.17□□□□□ -0.94
COPA-206ENST00000545266 ZC3H12CQ9C0D7 883 aaKnown RBP9.17□□□□□ -0.94
COPA-206ENST00000545266 USP21Q9UK80 565 aa9.17□□□□□ -0.94
COPA-206ENST00000545266 PCDHGB7Q9Y5F8 929 aa9.17□□□□□ -0.94
COPA-206ENST00000545266 ITGB2P05107 769 aa9.16□□□□□ -0.94
COPA-206ENST00000545266 LIG1P18858 919 aa9.16□□□□□ -0.94
COPA-206ENST00000545266 CHRNA4P43681 627 aa9.16□□□□□ -0.94
COPA-206ENST00000545266 RING1Q06587 406 aa9.16□□□□□ -0.94
COPA-206ENST00000545266 PDE3AQ14432 1141 aa9.16□□□□□ -0.94
COPA-206ENST00000545266 NUTM2GQ5VZR2 741 aa9.16□□□□□ -0.94
COPA-206ENST00000545266 FAM196AQ6ZSG2 479 aa9.16□□□□□ -0.94
COPA-206ENST00000545266 TXNRD3Q86VQ6 643 aa9.16□□□□□ -0.94
COPA-206ENST00000545266 SSBP4Q9BWG4 385 aaPredicted RBP9.16□□□□□ -0.94
COPA-206ENST00000545266 NT5C1AQ9BXI3 368 aa9.16□□□□□ -0.94
COPA-206ENST00000545266 CYP4F12Q9HCS2 524 aa9.16□□□□□ -0.94
COPA-206ENST00000545266 SUPT16HQ9Y5B9 1047 aaKnown RBP9.16□□□□□ -0.94
COPA-206ENST00000545266 C1QTNF9BB2RNN3 333 aa9.15□□□□□ -0.94
COPA-206ENST00000545266 GFRA2O00451 464 aa9.15□□□□□ -0.94
COPA-206ENST00000545266 ALX3O95076 343 aa9.15□□□□□ -0.94
COPA-206ENST00000545266 F13A1P00488 732 aa9.15□□□□□ -0.94
COPA-206ENST00000545266 SLFN14P0C7P3 912 aa9.15□□□□□ -0.94
COPA-206ENST00000545266 GJA8P48165 433 aa9.15□□□□□ -0.94
COPA-206ENST00000545266 SOX4Q06945 474 aaPredicted RBP9.15□□□□□ -0.94
COPA-206ENST00000545266 SEPT6Q14141 434 aa9.15□□□□□ -0.94
COPA-206ENST00000545266 BNC2Q6ZN30 1099 aaPredicted RBP9.15□□□□□ -0.94
COPA-206ENST00000545266 AGGF1Q8N302 714 aaeCLIP9.15□□□□□ -0.94
COPA-206ENST00000545266 GOLM1Q8NBJ4 401 aa9.15□□□□□ -0.94
COPA-206ENST00000545266 FAM46AQ96IP4 442 aaKnown RBP9.15□□□□□ -0.94
COPA-206ENST00000545266 CRIM1Q9NZV1 1036 aa9.15□□□□□ -0.94
COPA-206ENST00000545266 TACC3Q9Y6A5 838 aa9.15□□□□□ -0.94
COPA-206ENST00000545266 ADH5P11766 374 aa9.14□□□□□ -0.95
COPA-206ENST00000545266 IREB2P48200 963 aaKnown RBP9.14□□□□□ -0.95
COPA-206ENST00000545266 KIAA0825Q8IV33 1275 aa9.14□□□□□ -0.95
COPA-206ENST00000545266 EAF1Q96JC9 268 aaPredicted RBP9.14□□□□□ -0.95
COPA-206ENST00000545266 SPON2Q9BUD6 331 aa9.14□□□□□ -0.95
COPA-206ENST00000545266 CEP41Q9BYV8 373 aa9.14□□□□□ -0.95
COPA-206ENST00000545266 PPP1R9AQ9ULJ8 1098 aa9.14□□□□□ -0.95
COPA-206ENST00000545266 SNCAIPQ9Y6H5 919 aa9.14□□□□□ -0.95
COPA-206ENST00000545266 TMPRSS2O15393 492 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms