RNA–Protein interactions for RNA: ENST00000545026.1

LEMD3-206, Transcript of LEM domain containing 3, humanhuman

TSL 3

Gene LEMD3, Length 619 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-206ENST00000545026 TRIM37O94972 964 aa9.84□□□□□ -0.83
LEMD3-206ENST00000545026 AMPD1P23109 780 aa9.84□□□□□ -0.83
LEMD3-206ENST00000545026 COL9A2Q14055 689 aaPredicted RBP9.84□□□□□ -0.83
LEMD3-206ENST00000545026 NKD1Q969G9 470 aa9.84□□□□□ -0.83
LEMD3-206ENST00000545026 TLR3O15455 904 aaKnown RBP9.83□□□□□ -0.84
LEMD3-206ENST00000545026 ECEL1O95672 775 aa9.83□□□□□ -0.84
LEMD3-206ENST00000545026 CYP11A1P05108 521 aa9.83□□□□□ -0.84
LEMD3-206ENST00000545026 DGKGP49619 791 aa9.83□□□□□ -0.84
LEMD3-206ENST00000545026 RBL2Q08999 1139 aa9.83□□□□□ -0.84
LEMD3-206ENST00000545026 MAP1SQ66K74 1059 aaPredicted RBP9.83□□□□□ -0.84
LEMD3-206ENST00000545026 DMRTC2Q8IXT2 367 aaPredicted RBP9.83□□□□□ -0.84
LEMD3-206ENST00000545026 KLHL23Q8NBE8 558 aa9.83□□□□□ -0.84
LEMD3-206ENST00000545026 GALNT11Q8NCW6 608 aa9.83□□□□□ -0.84
LEMD3-206ENST00000545026 DNAJC2Q99543 621 aaKnown RBP9.83□□□□□ -0.84
LEMD3-206ENST00000545026 MAOBP27338 520 aa9.82□□□□□ -0.84
LEMD3-206ENST00000545026 MPP2Q14168 576 aa9.82□□□□□ -0.84
LEMD3-206ENST00000545026 POU4F3Q15319 338 aa9.82□□□□□ -0.84
LEMD3-206ENST00000545026 SEZ6Q53EL9 994 aa9.82□□□□□ -0.84
LEMD3-206ENST00000545026 KCNB2Q92953 911 aa9.82□□□□□ -0.84
LEMD3-206ENST00000545026 ZC3H12CQ9C0D7 883 aaKnown RBP9.82□□□□□ -0.84
LEMD3-206ENST00000545026 CTSBP07858 339 aa9.81□□□□□ -0.84
LEMD3-206ENST00000545026 SUZ12Q15022 739 aaKnown RBP9.81□□□□□ -0.84
LEMD3-206ENST00000545026 MAP4K3Q8IVH8 894 aa9.81□□□□□ -0.84
LEMD3-206ENST00000545026 CORO1BQ9BR76 489 aa9.81□□□□□ -0.84
LEMD3-206ENST00000545026 CCDC86Q9H6F5 360 aaKnown RBP9.81□□□□□ -0.84
LEMD3-206ENST00000545026 KRT82Q9NSB4 513 aa9.81□□□□□ -0.84
LEMD3-206ENST00000545026 DEAF1O75398 565 aaPredicted RBP9.8□□□□□ -0.84
LEMD3-206ENST00000545026 SELPP16109 830 aa9.8□□□□□ -0.84
LEMD3-206ENST00000545026 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.8□□□□□ -0.84
LEMD3-206ENST00000545026 REC114Q7Z4M0 266 aa9.8□□□□□ -0.84
LEMD3-206ENST00000545026 GPBAR1Q8TDU6 330 aa9.8□□□□□ -0.84
LEMD3-206ENST00000545026 STK10O94804 968 aaKnown RBP9.79□□□□□ -0.84
LEMD3-206ENST00000545026 CWF19L2Q2TBE0 894 aaKnown RBP9.79□□□□□ -0.84
LEMD3-206ENST00000545026 ZNF385CQ66K41 422 aaPredicted RBP9.79□□□□□ -0.84
LEMD3-206ENST00000545026 ZNF775Q96BV0 537 aaPredicted RBP9.79□□□□□ -0.84
LEMD3-206ENST00000545026 STRIP2Q9ULQ0 834 aa9.79□□□□□ -0.84
LEMD3-206ENST00000545026 SHROOM4Q9ULL8 1493 aa9.79□□□□□ -0.84
LEMD3-206ENST00000545026 LOC100289279A0A1B0GTE1 492 aa9.78□□□□□ -0.84
LEMD3-206ENST00000545026 DDX3YO15523 660 aaKnown RBP9.78□□□□□ -0.84
LEMD3-206ENST00000545026 ADAM11O75078 769 aa9.78□□□□□ -0.84
LEMD3-206ENST00000545026 SSBP05455 408 aaKnown RBP eCLIP9.78□□□□□ -0.84
LEMD3-206ENST00000545026 CDK8P49336 464 aa9.78□□□□□ -0.84
LEMD3-206ENST00000545026 NLRP12P59046 1061 aa9.78□□□□□ -0.84
LEMD3-206ENST00000545026 RPL6Q02878 288 aaKnown RBP9.78□□□□□ -0.84
LEMD3-206ENST00000545026 FOXD4L6Q3SYB3 417 aaPredicted RBP9.78□□□□□ -0.84
LEMD3-206ENST00000545026 FOXD4L3Q6VB84 417 aaPredicted RBP9.78□□□□□ -0.84
LEMD3-206ENST00000545026 DTWD1Q8N5C7 304 aa9.78□□□□□ -0.84
LEMD3-206ENST00000545026 HIRIP3Q9BW71 556 aaPredicted RBP9.78□□□□□ -0.84
LEMD3-206ENST00000545026 BRMS1Q9HCU9 246 aa9.78□□□□□ -0.84
LEMD3-206ENST00000545026 KCNK4Q9NYG8 393 aa9.78□□□□□ -0.84
LEMD3-206ENST00000545026 ZNF862O60290 1169 aa9.77□□□□□ -0.85
LEMD3-206ENST00000545026 BPNT1O95861 308 aa9.77□□□□□ -0.85
LEMD3-206ENST00000545026 CD68P34810 354 aaPredicted RBP9.77□□□□□ -0.85
LEMD3-206ENST00000545026 LCE2AQ5TA79 106 aaPredicted RBP9.77□□□□□ -0.85
LEMD3-206ENST00000545026 DIEXFQ68CQ4 756 aaKnown RBP9.77□□□□□ -0.85
LEMD3-206ENST00000545026 TREML4Q6UXN2 200 aa9.77□□□□□ -0.85
LEMD3-206ENST00000545026 DPH6Q7L8W6 267 aa9.77□□□□□ -0.85
LEMD3-206ENST00000545026 REXO1Q8N1G1 1221 aaKnown RBP9.77□□□□□ -0.85
LEMD3-206ENST00000545026 USP26Q9BXU7 913 aa9.77□□□□□ -0.85
LEMD3-206ENST00000545026 LNPKQ9C0E8 428 aa9.77□□□□□ -0.85
LEMD3-206ENST00000545026 ZNF408Q9H9D4 720 aa9.77□□□□□ -0.85
LEMD3-206ENST00000545026 PPT2Q9UMR5 302 aa9.77□□□□□ -0.85
LEMD3-206ENST00000545026 DLGAP3O95886 979 aa9.76□□□□□ -0.85
LEMD3-206ENST00000545026 MCM4P33991 863 aa9.76□□□□□ -0.85
LEMD3-206ENST00000545026 TRAPPC3LQ5T215 181 aa9.76□□□□□ -0.85
LEMD3-206ENST00000545026 WDR89Q96FK6 387 aaPredicted RBP9.76□□□□□ -0.85
LEMD3-206ENST00000545026 SRRTQ9BXP5 876 aaKnown RBP9.76□□□□□ -0.85
LEMD3-206ENST00000545026 PCDHA4Q9UN74 947 aa9.76□□□□□ -0.85
LEMD3-206ENST00000545026 POLR3KQ9Y2Y1 108 aaPredicted RBP9.76□□□□□ -0.85
LEMD3-206ENST00000545026 GFRA2O00451 464 aa9.75□□□□□ -0.85
LEMD3-206ENST00000545026 LIG1P18858 919 aa9.75□□□□□ -0.85
LEMD3-206ENST00000545026 ETFBP38117 255 aa9.75□□□□□ -0.85
LEMD3-206ENST00000545026 ZNF165P49910 485 aa9.75□□□□□ -0.85
LEMD3-206ENST00000545026 PDE3AQ14432 1141 aa9.75□□□□□ -0.85
LEMD3-206ENST00000545026 LINC00114Q6XXX2 140 aa9.75□□□□□ -0.85
LEMD3-206ENST00000545026 NEDD1Q8NHV4 660 aa9.75□□□□□ -0.85
LEMD3-206ENST00000545026 TRIM11Q96F44 468 aa9.75□□□□□ -0.85
LEMD3-206ENST00000545026 ACSBG1Q96GR2 724 aa9.75□□□□□ -0.85
LEMD3-206ENST00000545026 SHDQ96IW2 340 aa9.75□□□□□ -0.85
LEMD3-206ENST00000545026 RRAGCQ9HB90 399 aa9.75□□□□□ -0.85
LEMD3-206ENST00000545026 MRVI1Q9Y6F6 885 aa9.75□□□□□ -0.85
LEMD3-206ENST00000545026 DLL1O00548 723 aa9.74□□□□□ -0.85
LEMD3-206ENST00000545026 ARHGEF15O94989 841 aa9.74□□□□□ -0.85
LEMD3-206ENST00000545026 CLCQ05315 142 aa9.74□□□□□ -0.85
LEMD3-206ENST00000545026 INPP5AQ14642 412 aa9.74□□□□□ -0.85
LEMD3-206ENST00000545026 KIF4BQ2VIQ3 1234 aa9.74□□□□□ -0.85
LEMD3-206ENST00000545026 CCDC81Q6ZN84 652 aa9.74□□□□□ -0.85
LEMD3-206ENST00000545026 FBXO11Q86XK2 927 aa9.74□□□□□ -0.85
LEMD3-206ENST00000545026 CPLX3Q8WVH0 158 aa9.74□□□□□ -0.85
LEMD3-206ENST00000545026 ENAMQ9NRM1 1142 aa9.74□□□□□ -0.85
LEMD3-206ENST00000545026 A0A0A0MRY4 1105 aa9.73□□□□□ -0.85
LEMD3-206ENST00000545026 SNRPNP63162 240 aaKnown RBP9.73□□□□□ -0.85
LEMD3-206ENST00000545026 WIPI1Q5MNZ9 446 aaPredicted RBP9.73□□□□□ -0.85
LEMD3-206ENST00000545026 SOGA3Q5TF21 947 aa9.73□□□□□ -0.85
LEMD3-206ENST00000545026 LRFN4Q6PJG9 635 aa9.73□□□□□ -0.85
LEMD3-206ENST00000545026 GK5Q6ZS86 529 aa9.73□□□□□ -0.85
LEMD3-206ENST00000545026 FMR1NBQ8N0W7 255 aaPredicted RBP9.73□□□□□ -0.85
LEMD3-206ENST00000545026 SVOPQ8N4V2 548 aa9.73□□□□□ -0.85
LEMD3-206ENST00000545026 PMFBP1Q8TBY8 1022 aa9.73□□□□□ -0.85
LEMD3-206ENST00000545026 PLPPR2Q96GM1 343 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms