RNA–Protein interactions for RNA: ENST00000544373.5

CHEK1-218, Transcript of checkpoint kinase 1, humanhuman

TSL 1 (best) BASIC

Gene CHEK1, Length 1,653 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK1-218ENST00000544373 SSH3Q8TE77 659 aa13.24□□□□□ -0.29
CHEK1-218ENST00000544373 ELP3Q9H9T3 547 aa13.24□□□□□ -0.29
CHEK1-218ENST00000544373 ARAP2Q8WZ64 1704 aa13.24□□□□□ -0.29
CHEK1-218ENST00000544373 ZBTB22O15209 634 aa13.24□□□□□ -0.29
CHEK1-218ENST00000544373 FKBP1CQ5VVH2 108 aa13.24□□□□□ -0.29
CHEK1-218ENST00000544373 ABCF2Q9UG63 623 aa13.24□□□□□ -0.29
CHEK1-218ENST00000544373 UNCXA6NJT0 531 aa13.23□□□□□ -0.29
CHEK1-218ENST00000544373 IGF2BP3O00425 579 aaKnown RBP eCLIP13.23□□□□□ -0.29
CHEK1-218ENST00000544373 ZBTB48P10074 688 aaPredicted RBP13.23□□□□□ -0.29
CHEK1-218ENST00000544373 MAP3K9P80192 1104 aa13.23□□□□□ -0.29
CHEK1-218ENST00000544373 SREBF2Q12772 1141 aa13.23□□□□□ -0.29
CHEK1-218ENST00000544373 MVPQ14764 893 aaKnown RBP13.23□□□□□ -0.29
CHEK1-218ENST00000544373 FAM83AQ86UY5 434 aa13.23□□□□□ -0.29
CHEK1-218ENST00000544373 ZFPM1Q8IX07 1006 aa13.23□□□□□ -0.29
CHEK1-218ENST00000544373 ZNF384Q8TF68 577 aa13.23□□□□□ -0.29
CHEK1-218ENST00000544373 USP40Q9NVE5 1235 aa13.23□□□□□ -0.29
CHEK1-218ENST00000544373 TMOD2Q9NZR1 351 aa13.23□□□□□ -0.29
CHEK1-218ENST00000544373 HMG20BQ9P0W2 317 aa13.23□□□□□ -0.29
CHEK1-218ENST00000544373 ECM29Q5VYK3 1845 aa13.23□□□□□ -0.29
CHEK1-218ENST00000544373 SURF6O75683 361 aaKnown RBP13.22□□□□□ -0.29
CHEK1-218ENST00000544373 TCP10Q12799 353 aa13.22□□□□□ -0.29
CHEK1-218ENST00000544373 VGLL4Q14135 290 aa13.22□□□□□ -0.29
CHEK1-218ENST00000544373 TBC1D9Q6ZT07 1266 aa13.22□□□□□ -0.29
CHEK1-218ENST00000544373 MIGA2Q7L4E1 593 aa13.22□□□□□ -0.29
CHEK1-218ENST00000544373 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.22□□□□□ -0.29
CHEK1-218ENST00000544373 ZNF296Q8WUU4 475 aaPredicted RBP13.22□□□□□ -0.29
CHEK1-218ENST00000544373 OPTNQ96CV9 577 aa13.22□□□□□ -0.29
CHEK1-218ENST00000544373 PTPN18Q99952 460 aa13.22□□□□□ -0.29
CHEK1-218ENST00000544373 FAM198AQ9UFP1 575 aa13.22□□□□□ -0.29
CHEK1-218ENST00000544373 MANSC4A6NHS7 340 aaPredicted RBP13.21□□□□□ -0.29
CHEK1-218ENST00000544373 GORABQ5T7V8 394 aa13.21□□□□□ -0.29
CHEK1-218ENST00000544373 IFNL1Q8IU54 200 aa13.21□□□□□ -0.29
CHEK1-218ENST00000544373 ZKSCAN4Q969J2 545 aaPredicted RBP13.21□□□□□ -0.29
CHEK1-218ENST00000544373 CCDC85CA6NKD9 419 aa13.21□□□□□ -0.3
CHEK1-218ENST00000544373 GPR25O00155 361 aa13.21□□□□□ -0.3
CHEK1-218ENST00000544373 MCAMP43121 646 aa13.21□□□□□ -0.3
CHEK1-218ENST00000544373 OS9Q13438 667 aaPredicted RBP13.21□□□□□ -0.3
CHEK1-218ENST00000544373 TNNI3KQ59H18 835 aa13.21□□□□□ -0.3
CHEK1-218ENST00000544373 CEP85Q6P2H3 762 aa13.21□□□□□ -0.3
CHEK1-218ENST00000544373 SPATA5Q8NB90 893 aa13.21□□□□□ -0.3
CHEK1-218ENST00000544373 FAM151AQ8WW52 585 aa13.21□□□□□ -0.3
CHEK1-218ENST00000544373 DBNDD2Q9BQY9 259 aa13.21□□□□□ -0.3
CHEK1-218ENST00000544373 FPGT-TNNI3KV9GXZ4 949 aa13.21□□□□□ -0.3
CHEK1-218ENST00000544373 PDS5AQ29RF7 1337 aaKnown RBP13.21□□□□□ -0.3
CHEK1-218ENST00000544373 GAKO14976 1311 aa13.2□□□□□ -0.3
CHEK1-218ENST00000544373 ARID4AP29374 1257 aaPredicted RBP13.2□□□□□ -0.3
CHEK1-218ENST00000544373 INHBEP58166 350 aa13.2□□□□□ -0.3
CHEK1-218ENST00000544373 MECOMQ03112 1051 aa13.2□□□□□ -0.3
CHEK1-218ENST00000544373 DZIP1Q86YF9 867 aaKnown RBP13.2□□□□□ -0.3
CHEK1-218ENST00000544373 ZGPATQ8N5A5 531 aaKnown RBP13.2□□□□□ -0.3
CHEK1-218ENST00000544373 MS4A4AQ96JQ5 239 aa13.2□□□□□ -0.3
CHEK1-218ENST00000544373 WRNIP1Q96S55 665 aa13.2□□□□□ -0.3
CHEK1-218ENST00000544373 SNRKQ9NRH2 765 aa13.2□□□□□ -0.3
CHEK1-218ENST00000544373 NOP58Q9Y2X3 529 aaKnown RBP13.2□□□□□ -0.3
CHEK1-218ENST00000544373 SNCAIPQ9Y6H5 919 aa13.2□□□□□ -0.3
CHEK1-218ENST00000544373 SLURP2P0DP57 97 aa13.19□□□□□ -0.3
CHEK1-218ENST00000544373 INPP5BP32019 993 aa13.19□□□□□ -0.3
CHEK1-218ENST00000544373 OTUD5Q96G74 571 aa13.19□□□□□ -0.3
CHEK1-218ENST00000544373 CFHR5Q9BXR6 569 aa13.19□□□□□ -0.3
CHEK1-218ENST00000544373 CSADQ9Y600 493 aa13.19□□□□□ -0.3
CHEK1-218ENST00000544373 TESPA1A2RU30 521 aaPredicted RBP13.18□□□□□ -0.3
CHEK1-218ENST00000544373 WDHD1O75717 1129 aaPredicted RBP13.18□□□□□ -0.3
CHEK1-218ENST00000544373 RGS3P49796 1198 aa13.18□□□□□ -0.3
CHEK1-218ENST00000544373 SPTY2D1Q68D10 685 aaPredicted RBP13.18□□□□□ -0.3
CHEK1-218ENST00000544373 ERICH6Q7L0X2 663 aa13.18□□□□□ -0.3
CHEK1-218ENST00000544373 SH3BP5LQ7L8J4 393 aa13.18□□□□□ -0.3
CHEK1-218ENST00000544373 CTU1Q7Z7A3 348 aaKnown RBP13.18□□□□□ -0.3
CHEK1-218ENST00000544373 BRI3BPQ8WY22 251 aa13.18□□□□□ -0.3
CHEK1-218ENST00000544373 NSUN4Q96CB9 384 aaKnown RBP13.18□□□□□ -0.3
CHEK1-218ENST00000544373 FAM163AQ96GL9 167 aaPredicted RBP13.18□□□□□ -0.3
CHEK1-218ENST00000544373 GPR108Q9NPR9 543 aa13.18□□□□□ -0.3
CHEK1-218ENST00000544373 DDX4Q9NQI0 724 aaKnown RBP13.18□□□□□ -0.3
CHEK1-218ENST00000544373 TLR7Q9NYK1 1049 aaKnown RBP13.18□□□□□ -0.3
CHEK1-218ENST00000544373 COG6Q9Y2V7 657 aa13.18□□□□□ -0.3
CHEK1-218ENST00000544373 AKAP11Q9UKA4 1901 aa13.18□□□□□ -0.3
CHEK1-218ENST00000544373 RPAP1Q9BWH6 1393 aaPredicted RBP13.18□□□□□ -0.3
CHEK1-218ENST00000544373 MROH7-TTC4A0A0A0MT08 1334 aa13.18□□□□□ -0.3
CHEK1-218ENST00000544373 ALDH1A1P00352 501 aa13.18□□□□□ -0.3
CHEK1-218ENST00000544373 BTDP43251 543 aa13.18□□□□□ -0.3
CHEK1-218ENST00000544373 EAF2Q96CJ1 260 aaPredicted RBP13.18□□□□□ -0.3
CHEK1-218ENST00000544373 IDI2Q9BXS1 227 aa13.18□□□□□ -0.3
CHEK1-218ENST00000544373 CCDC8Q9H0W5 538 aaPredicted RBP13.18□□□□□ -0.3
CHEK1-218ENST00000544373 DBNLQ9UJU6 430 aaKnown RBP13.18□□□□□ -0.3
CHEK1-218ENST00000544373 RCAN3Q9UKA8 241 aa13.18□□□□□ -0.3
CHEK1-218ENST00000544373 EXOC6BQ9Y2D4 811 aa13.18□□□□□ -0.3
CHEK1-218ENST00000544373 GPR75-ASB3A0A0A6YYF3 556 aa13.17□□□□□ -0.3
CHEK1-218ENST00000544373 SPDYE5A6NIY4 337 aa13.17□□□□□ -0.3
CHEK1-218ENST00000544373 RHBDL3P58872 404 aa13.17□□□□□ -0.3
CHEK1-218ENST00000544373 CRHR2Q13324 411 aa13.17□□□□□ -0.3
CHEK1-218ENST00000544373 NOM1Q5C9Z4 860 aaKnown RBP13.17□□□□□ -0.3
CHEK1-218ENST00000544373 DCAF15Q66K64 600 aa13.17□□□□□ -0.3
CHEK1-218ENST00000544373 ZNF341Q9BYN7 854 aa13.17□□□□□ -0.3
CHEK1-218ENST00000544373 RAI14Q9P0K7 980 aa13.17□□□□□ -0.3
CHEK1-218ENST00000544373 RFX7Q2KHR2 1363 aa13.16□□□□□ -0.3
CHEK1-218ENST00000544373 CCL15-CCL14A0A0B4J2E2 113 aa13.16□□□□□ -0.3
CHEK1-218ENST00000544373 DDTLA6NHG4 134 aaPredicted RBP13.16□□□□□ -0.3
CHEK1-218ENST00000544373 IRF6O14896 467 aa13.16□□□□□ -0.3
CHEK1-218ENST00000544373 UQCRFS1P1P0C7P4 283 aa13.16□□□□□ -0.3
CHEK1-218ENST00000544373 PICALMQ13492 652 aa13.16□□□□□ -0.3
CHEK1-218ENST00000544373 CCL15Q16663 113 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms