RNA–Protein interactions for RNA: ENST00000542112.5

SNHG1-219, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 780 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-219ENST00000542112 POLD1P28340 1107 aa5.07□□□□□ -1.6
SNHG1-219ENST00000542112 ZAP70P43403 619 aa5.07□□□□□ -1.6
SNHG1-219ENST00000542112 SMCPP49901 116 aaPredicted RBP5.07□□□□□ -1.6
SNHG1-219ENST00000542112 PDIA5Q14554 519 aa5.07□□□□□ -1.6
SNHG1-219ENST00000542112 TAF7Q15545 349 aaPredicted RBP5.07□□□□□ -1.6
SNHG1-219ENST00000542112 EAPPQ56P03 285 aaPredicted RBP5.07□□□□□ -1.6
SNHG1-219ENST00000542112 IER5Q5VY09 327 aa5.07□□□□□ -1.6
SNHG1-219ENST00000542112 FBXO33Q7Z6M2 555 aa5.07□□□□□ -1.6
SNHG1-219ENST00000542112 ANKRD18AQ8IVF6 992 aa5.07□□□□□ -1.6
SNHG1-219ENST00000542112 ETFBKMTQ8IXQ9 262 aa5.07□□□□□ -1.6
SNHG1-219ENST00000542112 RBM12BQ8IXT5 1001 aaKnown RBP5.07□□□□□ -1.6
SNHG1-219ENST00000542112 TEX11Q8IYF3 940 aa5.07□□□□□ -1.6
SNHG1-219ENST00000542112 RPUSD2Q8IZ73 545 aaKnown RBP5.07□□□□□ -1.6
SNHG1-219ENST00000542112 CACTIN-AS1Q8N1I8 211 aa5.07□□□□□ -1.6
SNHG1-219ENST00000542112 GIMAP7Q8NHV1 300 aa5.07□□□□□ -1.6
SNHG1-219ENST00000542112 CCDC26Q8TAB7 109 aa5.07□□□□□ -1.6
SNHG1-219ENST00000542112 DNAAF4Q8WXU2 420 aa5.07□□□□□ -1.6
SNHG1-219ENST00000542112 EXOC4Q96A65 974 aa5.07□□□□□ -1.6
SNHG1-219ENST00000542112 ALKBH8Q96BT7 664 aaKnown RBP5.07□□□□□ -1.6
SNHG1-219ENST00000542112 FAM129BQ96TA1 746 aa5.07□□□□□ -1.6
SNHG1-219ENST00000542112 HOMER3Q9NSC5 361 aa5.07□□□□□ -1.6
SNHG1-219ENST00000542112 CCDC87Q9NVE4 849 aa5.07□□□□□ -1.6
SNHG1-219ENST00000542112 UTP6Q9NYH9 597 aaKnown RBP5.07□□□□□ -1.6
SNHG1-219ENST00000542112 CPSF2Q9P2I0 782 aaKnown RBP5.07□□□□□ -1.6
SNHG1-219ENST00000542112 SUN2Q9UH99 717 aa5.07□□□□□ -1.6
SNHG1-219ENST00000542112 USP25Q9UHP3 1055 aa5.07□□□□□ -1.6
SNHG1-219ENST00000542112 FRMD4BQ9Y2L6 1034 aa5.07□□□□□ -1.6
SNHG1-219ENST00000542112 NUP153P49790 1475 aaKnown RBP5.07□□□□□ -1.6
SNHG1-219ENST00000542112 SUPT6HQ7KZ85 1726 aaKnown RBP5.06□□□□□ -1.6
SNHG1-219ENST00000542112 BRD4O60885 1362 aaPredicted RBP5.06□□□□□ -1.6
SNHG1-219ENST00000542112 MTUS2Q5JR59 1369 aa5.06□□□□□ -1.6
SNHG1-219ENST00000542112 A0A1B0GTH6 734 aa5.06□□□□□ -1.6
SNHG1-219ENST00000542112 TTLL8A6PVC2 850 aa5.06□□□□□ -1.6
SNHG1-219ENST00000542112 TGFBR3LH3BV60 316 aa5.06□□□□□ -1.6
SNHG1-219ENST00000542112 ZBTB39O15060 712 aa5.06□□□□□ -1.6
SNHG1-219ENST00000542112 DGAT1O75907 488 aa5.06□□□□□ -1.6
SNHG1-219ENST00000542112 SASH1O94885 1247 aa5.06□□□□□ -1.6
SNHG1-219ENST00000542112 MBD3O95983 291 aa5.06□□□□□ -1.6
SNHG1-219ENST00000542112 NBPF7P0C2Y1 421 aaPredicted RBP5.06□□□□□ -1.6
SNHG1-219ENST00000542112 PLCB3Q01970 1234 aa5.06□□□□□ -1.6
SNHG1-219ENST00000542112 EHHADHQ08426 723 aa5.06□□□□□ -1.6
SNHG1-219ENST00000542112 NCBP1Q09161 790 aaKnown RBP5.06□□□□□ -1.6
SNHG1-219ENST00000542112 POU4F2Q12837 409 aa5.06□□□□□ -1.6
SNHG1-219ENST00000542112 SFSWAPQ12872 951 aaKnown RBP5.06□□□□□ -1.6
SNHG1-219ENST00000542112 NEDD9Q14511 834 aa5.06□□□□□ -1.6
SNHG1-219ENST00000542112 SLC5A9Q2M3M2 681 aa5.06□□□□□ -1.6
SNHG1-219ENST00000542112 C6orf118Q5T5N4 469 aa5.06□□□□□ -1.6
SNHG1-219ENST00000542112 LRSAM1Q6UWE0 723 aa5.06□□□□□ -1.6
SNHG1-219ENST00000542112 KIAA1328Q86T90 577 aa5.06□□□□□ -1.6
SNHG1-219ENST00000542112 TREML1Q86YW5 311 aa5.06□□□□□ -1.6
SNHG1-219ENST00000542112 GJD3Q8N144 294 aa5.06□□□□□ -1.6
SNHG1-219ENST00000542112 DRAXINQ8NBI3 349 aaPredicted RBP5.06□□□□□ -1.6
SNHG1-219ENST00000542112 ZCRB1Q8TBF4 217 aaKnown RBP5.06□□□□□ -1.6
SNHG1-219ENST00000542112 MIPOL1Q8TD10 442 aa5.06□□□□□ -1.6
SNHG1-219ENST00000542112 C7orf43Q8WVR3 580 aa5.06□□□□□ -1.6
SNHG1-219ENST00000542112 MIEF2Q96C03 454 aa5.06□□□□□ -1.6
SNHG1-219ENST00000542112 DDX11Q96FC9 970 aa5.06□□□□□ -1.6
SNHG1-219ENST00000542112 DRC1Q96MC2 740 aa5.06□□□□□ -1.6
SNHG1-219ENST00000542112 LZTS2Q9BRK4 669 aa5.06□□□□□ -1.6
SNHG1-219ENST00000542112 MTA3Q9BTC8 594 aa5.06□□□□□ -1.6
SNHG1-219ENST00000542112 RRP15Q9Y3B9 282 aaKnown RBP5.06□□□□□ -1.6
SNHG1-219ENST00000542112 EPRSP07814 1512 aaKnown RBP5.06□□□□□ -1.6
SNHG1-219ENST00000542112 SCAF11Q99590 1463 aaKnown RBP5.06□□□□□ -1.6
SNHG1-219ENST00000542112 CDC42BPAQ5VT25 1732 aa5.06□□□□□ -1.6
SNHG1-219ENST00000542112 CCDC7Q96M83 1385 aa5.05□□□□□ -1.6
SNHG1-219ENST00000542112 A0A087WUV0 522 aaPredicted RBP5.05□□□□□ -1.6
SNHG1-219ENST00000542112 A0A1B0GUA9 196 aa5.05□□□□□ -1.6
SNHG1-219ENST00000542112 UNCXA6NJT0 531 aa5.05□□□□□ -1.6
SNHG1-219ENST00000542112 MICAL2O94851 1124 aa5.05□□□□□ -1.6
SNHG1-219ENST00000542112 PDGFAP04085 211 aa5.05□□□□□ -1.6
SNHG1-219ENST00000542112 VDRP11473 427 aa5.05□□□□□ -1.6
SNHG1-219ENST00000542112 GCFC2P16383 781 aaKnown RBP5.05□□□□□ -1.6
SNHG1-219ENST00000542112 PHKA2P46019 1235 aa5.05□□□□□ -1.6
SNHG1-219ENST00000542112 DNM1Q05193 864 aaKnown RBP5.05□□□□□ -1.6
SNHG1-219ENST00000542112 FMR1Q06787 632 aaKnown RBP eCLIP5.05□□□□□ -1.6
SNHG1-219ENST00000542112 GRIK3Q13003 919 aa5.05□□□□□ -1.6
SNHG1-219ENST00000542112 DSC3Q14574 896 aa5.05□□□□□ -1.6
SNHG1-219ENST00000542112 RASA3Q14644 834 aa5.05□□□□□ -1.6
SNHG1-219ENST00000542112 RGL3Q3MIN7 710 aa5.05□□□□□ -1.6
SNHG1-219ENST00000542112 FAM26DQ5JW98 314 aa5.05□□□□□ -1.6
SNHG1-219ENST00000542112 ZNF280DQ6N043 979 aa5.05□□□□□ -1.6
SNHG1-219ENST00000542112 SYT10Q6XYQ8 523 aa5.05□□□□□ -1.6
SNHG1-219ENST00000542112 BICDL1Q6ZP65 573 aa5.05□□□□□ -1.6
SNHG1-219ENST00000542112 PRICKLE2Q7Z3G6 844 aa5.05□□□□□ -1.6
SNHG1-219ENST00000542112 ATCAYQ86WG3 371 aa5.05□□□□□ -1.6
SNHG1-219ENST00000542112 C10orf67Q8IYJ2 551 aa5.05□□□□□ -1.6
SNHG1-219ENST00000542112 CCDC191Q8NCU4 936 aa5.05□□□□□ -1.6
SNHG1-219ENST00000542112 TTC16Q8NEE8 873 aa5.05□□□□□ -1.6
SNHG1-219ENST00000542112 HDAC7Q8WUI4 952 aa5.05□□□□□ -1.6
SNHG1-219ENST00000542112 EDEM1Q92611 657 aa5.05□□□□□ -1.6
SNHG1-219ENST00000542112 MRRFQ96E11 262 aaKnown RBP5.05□□□□□ -1.6
SNHG1-219ENST00000542112 SUSD3Q96L08 255 aa5.05□□□□□ -1.6
SNHG1-219ENST00000542112 CFAP53Q96M91 514 aa5.05□□□□□ -1.6
SNHG1-219ENST00000542112 THUMPD2Q9BTF0 503 aaKnown RBP5.05□□□□□ -1.6
SNHG1-219ENST00000542112 POLR3CQ9BUI4 534 aaPredicted RBP5.05□□□□□ -1.6
SNHG1-219ENST00000542112 TRIM6Q9C030 488 aaPredicted RBP5.05□□□□□ -1.6
SNHG1-219ENST00000542112 NEUROD4Q9HD90 331 aa5.05□□□□□ -1.6
SNHG1-219ENST00000542112 TIMMDC1Q9NPL8 285 aa5.05□□□□□ -1.6
SNHG1-219ENST00000542112 GNL3LQ9NVN8 582 aaKnown RBP5.05□□□□□ -1.6
SNHG1-219ENST00000542112 ARGLU1Q9NWB6 273 aaPredicted RBP5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms