RNA–Protein interactions for RNA: ENST00000541297.6

CLPTM1-202, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2 BASIC

Gene CLPTM1, Length 2,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-202ENST00000541297 ATP2B4P23634 1241 aa17.99■□□□□ 0.47
CLPTM1-202ENST00000541297 NAA16Q6N069 864 aaPredicted RBP17.99■□□□□ 0.47
CLPTM1-202ENST00000541297 DHX32Q7L7V1 743 aaKnown RBP17.99■□□□□ 0.47
CLPTM1-202ENST00000541297 ZNF804AQ7Z570 1209 aa17.99■□□□□ 0.47
CLPTM1-202ENST00000541297 TBC1D16Q8TBP0 767 aa17.99■□□□□ 0.47
CLPTM1-202ENST00000541297 MAP7D2Q96T17 732 aa17.99■□□□□ 0.47
CLPTM1-202ENST00000541297 PATL2C9JE40 543 aaKnown RBP17.98■□□□□ 0.47
CLPTM1-202ENST00000541297 MECOMQ03112 1051 aa17.98■□□□□ 0.47
CLPTM1-202ENST00000541297 ST3GAL1Q11201 340 aa17.98■□□□□ 0.47
CLPTM1-202ENST00000541297 ANKRD1Q15327 319 aa17.98■□□□□ 0.47
CLPTM1-202ENST00000541297 IFNL3Q8IZI9 196 aa17.98■□□□□ 0.47
CLPTM1-202ENST00000541297 NBPF3Q9H094 633 aa17.98■□□□□ 0.47
CLPTM1-202ENST00000541297 QSER1Q2KHR3 1735 aa17.98■□□□□ 0.47
CLPTM1-202ENST00000541297 CHD4Q14839 1912 aa17.98■□□□□ 0.47
CLPTM1-202ENST00000541297 HMGB1P09429 215 aaKnown RBP17.98■□□□□ 0.47
CLPTM1-202ENST00000541297 BRF1Q92994 677 aa17.98■□□□□ 0.47
CLPTM1-202ENST00000541297 ZSCAN31Q96LW9 406 aaPredicted RBP17.98■□□□□ 0.47
CLPTM1-202ENST00000541297 NAPBQ9H115 298 aa17.98■□□□□ 0.47
CLPTM1-202ENST00000541297 MAGEB6P1A0A0J9YX57 407 aa17.97■□□□□ 0.47
CLPTM1-202ENST00000541297 GSG1L2A8MUP6 293 aa17.97■□□□□ 0.47
CLPTM1-202ENST00000541297 DYNLL1P63167 89 aaKnown RBP17.97■□□□□ 0.47
CLPTM1-202ENST00000541297 FOXD4L6Q3SYB3 417 aaPredicted RBP17.97■□□□□ 0.47
CLPTM1-202ENST00000541297 FOXD4L3Q6VB84 417 aaPredicted RBP17.97■□□□□ 0.47
CLPTM1-202ENST00000541297 SDR42E1Q8WUS8 393 aa17.97■□□□□ 0.47
CLPTM1-202ENST00000541297 NSUN4Q96CB9 384 aaKnown RBP17.97■□□□□ 0.47
CLPTM1-202ENST00000541297 TSPY26PQ9H489 355 aa17.97■□□□□ 0.47
CLPTM1-202ENST00000541297 SH2B1Q9NRF2 756 aaPredicted RBP17.97■□□□□ 0.47
CLPTM1-202ENST00000541297 ATP6V0A2Q9Y487 856 aa17.97■□□□□ 0.47
CLPTM1-202ENST00000541297 LTBP1Q14766 1721 aa17.97■□□□□ 0.47
CLPTM1-202ENST00000541297 SP8Q8IXZ3 490 aa17.97■□□□□ 0.47
CLPTM1-202ENST00000541297 MASTLQ96GX5 879 aa17.97■□□□□ 0.47
CLPTM1-202ENST00000541297 ALDH8A1Q9H2A2 487 aaPredicted RBP17.97■□□□□ 0.47
CLPTM1-202ENST00000541297 BAZ2AQ9UIF9 1905 aaKnown RBP17.97■□□□□ 0.47
CLPTM1-202ENST00000541297 RIMBP2O15034 1052 aa17.96■□□□□ 0.47
CLPTM1-202ENST00000541297 PTMAP06454 111 aaKnown RBP17.96■□□□□ 0.47
CLPTM1-202ENST00000541297 C2CD5Q86YS7 1000 aa17.96■□□□□ 0.47
CLPTM1-202ENST00000541297 TBC1D10CQ8IV04 446 aa17.96■□□□□ 0.47
CLPTM1-202ENST00000541297 TDRD7Q8NHU6 1098 aaKnown RBP17.96■□□□□ 0.47
CLPTM1-202ENST00000541297 PDS5AQ29RF7 1337 aaKnown RBP17.96■□□□□ 0.47
CLPTM1-202ENST00000541297 DYNC1I1O14576 645 aa17.96■□□□□ 0.47
CLPTM1-202ENST00000541297 ALDH1B1P30837 517 aa17.96■□□□□ 0.47
CLPTM1-202ENST00000541297 SASS6Q6UVJ0 657 aa17.96■□□□□ 0.47
CLPTM1-202ENST00000541297 STK11IPQ8N1F8 1099 aa17.96■□□□□ 0.47
CLPTM1-202ENST00000541297 CD209Q9NNX6 404 aa17.96■□□□□ 0.47
CLPTM1-202ENST00000541297 CHRNA5P30532 468 aa17.95■□□□□ 0.46
CLPTM1-202ENST00000541297 TDO2P48775 406 aa17.95■□□□□ 0.46
CLPTM1-202ENST00000541297 EXOSC10Q01780 885 aaKnown RBP17.95■□□□□ 0.46
CLPTM1-202ENST00000541297 ARID3AQ99856 593 aa17.95■□□□□ 0.46
CLPTM1-202ENST00000541297 INCENPQ9NQS7 918 aa17.95■□□□□ 0.46
CLPTM1-202ENST00000541297 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.95■□□□□ 0.46
CLPTM1-202ENST00000541297 TCHHQ07283 1943 aa17.95■□□□□ 0.46
CLPTM1-202ENST00000541297 CTDSPL2Q05D32 466 aa17.95■□□□□ 0.46
CLPTM1-202ENST00000541297 NKX2-3Q8TAU0 364 aa17.95■□□□□ 0.46
CLPTM1-202ENST00000541297 RIOK1Q9BRS2 568 aaKnown RBP17.95■□□□□ 0.46
CLPTM1-202ENST00000541297 GDPD2Q9HCC8 539 aa17.95■□□□□ 0.46
CLPTM1-202ENST00000541297 ZNF219Q9P2Y4 722 aaPredicted RBP17.95■□□□□ 0.46
CLPTM1-202ENST00000541297 SMC3Q9UQE7 1217 aa17.95■□□□□ 0.46
CLPTM1-202ENST00000541297 GADD45BO75293 160 aaPredicted RBP17.94■□□□□ 0.46
CLPTM1-202ENST00000541297 APOBRQ0VD83 1088 aa17.94■□□□□ 0.46
CLPTM1-202ENST00000541297 GRIK5Q16478 980 aa17.94■□□□□ 0.46
CLPTM1-202ENST00000541297 C15orf52Q6ZUT6 534 aaKnown RBP17.94■□□□□ 0.46
CLPTM1-202ENST00000541297 GPHNQ9NQX3 736 aaPredicted RBP17.94■□□□□ 0.46
CLPTM1-202ENST00000541297 AATFQ9NY61 560 aaKnown RBP eCLIP17.94■□□□□ 0.46
CLPTM1-202ENST00000541297 MAST2Q6P0Q8 1798 aa17.94■□□□□ 0.46
CLPTM1-202ENST00000541297 H0YIN7 160 aa17.94■□□□□ 0.46
CLPTM1-202ENST00000541297 GNAT2P19087 354 aa17.94■□□□□ 0.46
CLPTM1-202ENST00000541297 TMC4Q7Z404 712 aa17.94■□□□□ 0.46
CLPTM1-202ENST00000541297 RALYLQ86SE5 291 aaKnown RBP17.94■□□□□ 0.46
CLPTM1-202ENST00000541297 DZIP1Q86YF9 867 aaKnown RBP17.94■□□□□ 0.46
CLPTM1-202ENST00000541297 NCOA7Q8NI08 942 aa17.94■□□□□ 0.46
CLPTM1-202ENST00000541297 NAP1L2Q9ULW6 460 aaPredicted RBP17.94■□□□□ 0.46
CLPTM1-202ENST00000541297 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.94■□□□□ 0.461e-6■□□□□ 8.8
CLPTM1-202ENST00000541297 SLX4Q8IY92 1834 aa17.93■□□□□ 0.46
CLPTM1-202ENST00000541297 GJB2P29033 226 aa17.93■□□□□ 0.46
CLPTM1-202ENST00000541297 ALX1Q15699 326 aa17.93■□□□□ 0.46
CLPTM1-202ENST00000541297 MPNDQ8N594 471 aa17.93■□□□□ 0.46
CLPTM1-202ENST00000541297 WDR66Q8TBY9 1149 aa17.93■□□□□ 0.46
CLPTM1-202ENST00000541297 NACAP1Q9BZK3 213 aa17.93■□□□□ 0.46
CLPTM1-202ENST00000541297 LDHBP07195 334 aaKnown RBP17.92■□□□□ 0.46
CLPTM1-202ENST00000541297 MB21D2Q8IYB1 491 aaPredicted RBP17.92■□□□□ 0.46
CLPTM1-202ENST00000541297 DUOX1Q9NRD9 1551 aa17.92■□□□□ 0.46
CLPTM1-202ENST00000541297 PRC1O43663 620 aa17.92■□□□□ 0.46
CLPTM1-202ENST00000541297 TRDNQ13061 729 aa17.92■□□□□ 0.46
CLPTM1-202ENST00000541297 DPP8Q6V1X1 898 aaPredicted RBP17.92■□□□□ 0.46
CLPTM1-202ENST00000541297 SYAP1Q96A49 352 aaPredicted RBP17.92■□□□□ 0.46
CLPTM1-202ENST00000541297 NEDD4P46934 1319 aa17.92■□□□□ 0.46
CLPTM1-202ENST00000541297 B4E1Z4 1266 aa17.92■□□□□ 0.46
CLPTM1-202ENST00000541297 KIAA2012Q0VF49 1180 aa17.92■□□□□ 0.46
CLPTM1-202ENST00000541297 MYH2Q9UKX2 1941 aa17.92■□□□□ 0.46
CLPTM1-202ENST00000541297 IL1R1P14778 569 aa17.91■□□□□ 0.46
CLPTM1-202ENST00000541297 ANTXR2P58335 489 aa17.91■□□□□ 0.46
CLPTM1-202ENST00000541297 DIXDC1Q155Q3 683 aa17.91■□□□□ 0.46
CLPTM1-202ENST00000541297 SPTY2D1Q68D10 685 aaPredicted RBP17.91■□□□□ 0.46
CLPTM1-202ENST00000541297 USP48Q86UV5 1035 aa17.91■□□□□ 0.46
CLPTM1-202ENST00000541297 TMX4Q9H1E5 349 aaPredicted RBP17.91■□□□□ 0.46
CLPTM1-202ENST00000541297 MINDY4BA8MYZ0 360 aa17.91■□□□□ 0.46
CLPTM1-202ENST00000541297 SMIM22K7EJ46 135 aa17.91■□□□□ 0.46
CLPTM1-202ENST00000541297 TACC3Q9Y6A5 838 aa17.91■□□□□ 0.46
CLPTM1-202ENST00000541297 ZMYM6O95789 1325 aa17.91■□□□□ 0.46
CLPTM1-202ENST00000541297 GTF3C6Q969F1 213 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms