RNA–Protein interactions for RNA: ENST00000541204.5

RNF4-222, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 2,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-222ENST00000541204 DMTNQ08495 405 aa14.55□□□□□ -0.08
RNF4-222ENST00000541204 TBC1D10CQ8IV04 446 aa14.55□□□□□ -0.08
RNF4-222ENST00000541204 NCOA7Q8NI08 942 aa14.55□□□□□ -0.08
RNF4-222ENST00000541204 NBPF3Q9H094 633 aa14.55□□□□□ -0.08
RNF4-222ENST00000541204 GJB4Q9NTQ9 266 aa14.55□□□□□ -0.08
RNF4-222ENST00000541204 ANO10Q9NW15 660 aa14.55□□□□□ -0.08
RNF4-222ENST00000541204 PAXBP1Q9Y5B6 917 aa14.55□□□□□ -0.08
RNF4-222ENST00000541204 CARMIL3Q8ND23 1372 aa14.55□□□□□ -0.08
RNF4-222ENST00000541204 UQCRFS1P1P0C7P4 283 aa14.55□□□□□ -0.08
RNF4-222ENST00000541204 ARID4AP29374 1257 aaPredicted RBP14.55□□□□□ -0.08
RNF4-222ENST00000541204 ERFEQ4G0M1 354 aa14.55□□□□□ -0.08
RNF4-222ENST00000541204 CEP135Q66GS9 1140 aa14.55□□□□□ -0.08
RNF4-222ENST00000541204 AOPEPQ8N6M6 819 aa14.55□□□□□ -0.08
RNF4-222ENST00000541204 SKILP12757 684 aa14.54□□□□□ -0.08
RNF4-222ENST00000541204 FDPSP14324 419 aaKnown RBP14.54□□□□□ -0.08
RNF4-222ENST00000541204 GTF2E1P29083 439 aaPredicted RBP14.54□□□□□ -0.08
RNF4-222ENST00000541204 PARP10Q53GL7 1025 aa14.54□□□□□ -0.08
RNF4-222ENST00000541204 MB21D2Q8IYB1 491 aaPredicted RBP14.54□□□□□ -0.08
RNF4-222ENST00000541204 ZNF274Q96GC6 653 aaPredicted RBP14.54□□□□□ -0.08
RNF4-222ENST00000541204 ARMT1Q9H993 441 aa14.54□□□□□ -0.08
RNF4-222ENST00000541204 PCDHA7Q9UN72 937 aa14.54□□□□□ -0.08
RNF4-222ENST00000541204 A0A1B0GVL5 298 aa14.54□□□□□ -0.08
RNF4-222ENST00000541204 MBD4O95243 580 aa14.54□□□□□ -0.08
RNF4-222ENST00000541204 CHRNDQ07001 517 aa14.54□□□□□ -0.08
RNF4-222ENST00000541204 TRDNQ13061 729 aa14.54□□□□□ -0.08
RNF4-222ENST00000541204 ATL3Q6DD88 541 aa14.54□□□□□ -0.08
RNF4-222ENST00000541204 TICAM2Q86XR7 235 aa14.54□□□□□ -0.08
RNF4-222ENST00000541204 MIGA1Q8NAN2 632 aa14.54□□□□□ -0.08
RNF4-222ENST00000541204 CCDC69A6NI79 296 aa14.53□□□□□ -0.08
RNF4-222ENST00000541204 B4E1Z4 1266 aa14.53□□□□□ -0.08
RNF4-222ENST00000541204 TOM1O60784 492 aa14.53□□□□□ -0.08
RNF4-222ENST00000541204 RBM6P78332 1123 aaKnown RBP14.53□□□□□ -0.08
RNF4-222ENST00000541204 ZHX1Q9UKY1 873 aaPredicted RBP14.53□□□□□ -0.08
RNF4-222ENST00000541204 PRKAB2O43741 272 aa14.53□□□□□ -0.08
RNF4-222ENST00000541204 UBE3CQ15386 1083 aa14.53□□□□□ -0.08
RNF4-222ENST00000541204 BARGINQ6ZT62 677 aa14.53□□□□□ -0.08
RNF4-222ENST00000541204 CYB5R4Q7L1T6 521 aa14.53□□□□□ -0.08
RNF4-222ENST00000541204 CEP57L1Q8IYX8 460 aa14.53□□□□□ -0.08
RNF4-222ENST00000541204 FMR1NBQ8N0W7 255 aaPredicted RBP14.53□□□□□ -0.08
RNF4-222ENST00000541204 ZNF512BQ96KM6 892 aaPredicted RBP14.53□□□□□ -0.08
RNF4-222ENST00000541204 SDF4Q9BRK5 362 aa14.53□□□□□ -0.08
RNF4-222ENST00000541204 SENP2Q9HC62 589 aa14.53□□□□□ -0.08
RNF4-222ENST00000541204 ABCC12Q96J65 1359 aa14.52□□□□□ -0.08
RNF4-222ENST00000541204 TCRBV5S4A2TA0A5A2 114 aa14.52□□□□□ -0.08
RNF4-222ENST00000541204 UBAP1LF5GYI3 381 aa14.52□□□□□ -0.08
RNF4-222ENST00000541204 CPLX1O14810 134 aa14.52□□□□□ -0.08
RNF4-222ENST00000541204 NEMFO60524 1076 aa14.52□□□□□ -0.08
RNF4-222ENST00000541204 CTDSPL2Q05D32 466 aa14.52□□□□□ -0.08
RNF4-222ENST00000541204 MRPS27Q92552 414 aaKnown RBP14.52□□□□□ -0.08
RNF4-222ENST00000541204 TRMT1Q9NXH9 659 aaKnown RBP14.52□□□□□ -0.08
RNF4-222ENST00000541204 ABCF2Q9UG63 623 aa14.52□□□□□ -0.08
RNF4-222ENST00000541204 ANKRD36CQ5JPF3 1778 aa14.52□□□□□ -0.08
RNF4-222ENST00000541204 POLR3DP05423 398 aaPredicted RBP14.52□□□□□ -0.09
RNF4-222ENST00000541204 GYG1P46976 350 aa14.52□□□□□ -0.09
RNF4-222ENST00000541204 NDUFA8P51970 172 aa14.52□□□□□ -0.09
RNF4-222ENST00000541204 CCZ1BP86790 482 aa14.52□□□□□ -0.09
RNF4-222ENST00000541204 CCZ1P86791 482 aaPredicted RBP14.52□□□□□ -0.09
RNF4-222ENST00000541204 MAP3K12Q12852 859 aa14.52□□□□□ -0.09
RNF4-222ENST00000541204 SYCP1Q15431 976 aa14.52□□□□□ -0.09
RNF4-222ENST00000541204 SMARCC1Q92922 1105 aaPredicted RBP14.52□□□□□ -0.09
RNF4-222ENST00000541204 STRBPQ96SI9 672 aaKnown RBP14.52□□□□□ -0.09
RNF4-222ENST00000541204 TOMM22Q9NS69 142 aa14.52□□□□□ -0.09
RNF4-222ENST00000541204 LRP2BPQ9P2M1 347 aa14.52□□□□□ -0.09
RNF4-222ENST00000541204 HPS5Q9UPZ3 1129 aa14.52□□□□□ -0.09
RNF4-222ENST00000541204 ZNF652Q9Y2D9 606 aa14.52□□□□□ -0.09
RNF4-222ENST00000541204 SPEF2Q9C093 1822 aa14.52□□□□□ -0.09
RNF4-222ENST00000541204 LTBP4Q8N2S1 1624 aa14.52□□□□□ -0.09
RNF4-222ENST00000541204 MYH14Q7Z406 1995 aaKnown RBP14.52□□□□□ -0.09
RNF4-222ENST00000541204 PTPN14Q15678 1187 aa14.51□□□□□ -0.09
RNF4-222ENST00000541204 AK7Q96M32 723 aa14.51□□□□□ -0.09
RNF4-222ENST00000541204 MYL10Q9BUA6 226 aa14.51□□□□□ -0.09
RNF4-222ENST00000541204 SRP68Q9UHB9 627 aaKnown RBP14.51□□□□□ -0.09
RNF4-222ENST00000541204 CLIC4Q9Y696 253 aa14.51□□□□□ -0.09
RNF4-222ENST00000541204 MYH3P11055 1940 aa14.51□□□□□ -0.09
RNF4-222ENST00000541204 RRP12Q5JTH9 1297 aaKnown RBP14.51□□□□□ -0.09
RNF4-222ENST00000541204 UTP14CQ5TAP6 766 aaKnown RBP14.51□□□□□ -0.09
RNF4-222ENST00000541204 ADALQ6DHV7 355 aa14.51□□□□□ -0.09
RNF4-222ENST00000541204 RTEL1Q9NZ71 1219 aa14.51□□□□□ -0.09
RNF4-222ENST00000541204 NWD2Q9ULI1 1742 aa14.51□□□□□ -0.09
RNF4-222ENST00000541204 NEDD4P46934 1319 aa14.51□□□□□ -0.09
RNF4-222ENST00000541204 SF3A1Q15459 793 aaKnown RBP14.51□□□□□ -0.09
RNF4-222ENST00000541204 LINC00301Q8NCQ3 95 aa14.51□□□□□ -0.09
RNF4-222ENST00000541204 NAT10Q9H0A0 1025 aaKnown RBP14.51□□□□□ -0.09
RNF4-222ENST00000541204 NAPBQ9H115 298 aa14.51□□□□□ -0.09
RNF4-222ENST00000541204 EPB41L4AQ9HCS5 686 aaPredicted RBP14.51□□□□□ -0.09
RNF4-222ENST00000541204 AKAP11Q9UKA4 1901 aa14.5□□□□□ -0.09
RNF4-222ENST00000541204 STK38Q15208 465 aa14.5□□□□□ -0.09
RNF4-222ENST00000541204 DPCR1Q3MIW9 517 aa14.5□□□□□ -0.09
RNF4-222ENST00000541204 TBC1D9BQ66K14 1250 aa14.5□□□□□ -0.09
RNF4-222ENST00000541204 NYAP1Q6ZVC0 841 aa14.5□□□□□ -0.09
RNF4-222ENST00000541204 NBPF11Q86T75 865 aa14.5□□□□□ -0.09
RNF4-222ENST00000541204 MICU3Q86XE3 530 aa14.5□□□□□ -0.09
RNF4-222ENST00000541204 ORC3Q9UBD5 711 aaPredicted RBP14.5□□□□□ -0.09
RNF4-222ENST00000541204 MYO5AQ9Y4I1 1855 aaKnown RBP14.5□□□□□ -0.09
RNF4-222ENST00000541204 WNK3Q9BYP7 1800 aa14.5□□□□□ -0.09
RNF4-222ENST00000541204 NFXL1Q6ZNB6 911 aa14.5□□□□□ -0.09
RNF4-222ENST00000541204 LCORLQ8N3X6 602 aa14.5□□□□□ -0.09
RNF4-222ENST00000541204 C8orf76Q96K31 380 aa14.5□□□□□ -0.09
RNF4-222ENST00000541204 AIFM3Q96NN9 605 aa14.5□□□□□ -0.09
RNF4-222ENST00000541204 IFNL3Q8IZI9 196 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms