RNA–Protein interactions for RNA: ENST00000539409.5

FAM60A-206, Transcript of Protein FAM60A, humanhuman

TSL 1 (best) BASIC

Gene FAM60A, Length 2,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM60A-206ENST00000539409 RNF181Q9P0P0 153 aa13.67□□□□□ -0.22
FAM60A-206ENST00000539409 NECTIN1Q15223 517 aa13.66□□□□□ -0.22
FAM60A-206ENST00000539409 EPB41L4AQ9HCS5 686 aaPredicted RBP13.66□□□□□ -0.22
FAM60A-206ENST00000539409 SERPINA10Q9UK55 444 aa13.66□□□□□ -0.22
FAM60A-206ENST00000539409 PALD1Q9ULE6 856 aa13.66□□□□□ -0.22
FAM60A-206ENST00000539409 SLC4A4Q9Y6R1 1079 aa13.66□□□□□ -0.22
FAM60A-206ENST00000539409 U3KPZ7 1027 aaPredicted RBP13.66□□□□□ -0.22
FAM60A-206ENST00000539409 LAMA4Q16363 1823 aa13.66□□□□□ -0.22
FAM60A-206ENST00000539409 GSG1L2A8MUP6 293 aa13.66□□□□□ -0.22
FAM60A-206ENST00000539409 GRIN3BO60391 1043 aa13.66□□□□□ -0.22
FAM60A-206ENST00000539409 BAG3O95817 575 aa13.66□□□□□ -0.22
FAM60A-206ENST00000539409 SH3RF3Q8TEJ3 882 aaPredicted RBP13.66□□□□□ -0.22
FAM60A-206ENST00000539409 ZDHHC15Q96MV8 337 aa13.66□□□□□ -0.22
FAM60A-206ENST00000539409 NOL10Q9BSC4 688 aaKnown RBP13.66□□□□□ -0.22
FAM60A-206ENST00000539409 FOCADQ5VW36 1801 aa13.66□□□□□ -0.22
FAM60A-206ENST00000539409 PATL2C9JE40 543 aaKnown RBP13.65□□□□□ -0.22
FAM60A-206ENST00000539409 MCCP23508 829 aa13.65□□□□□ -0.22
FAM60A-206ENST00000539409 RHBDL3P58872 404 aa13.65□□□□□ -0.22
FAM60A-206ENST00000539409 C9orf131Q5VYM1 1079 aa13.65□□□□□ -0.22
FAM60A-206ENST00000539409 CERS3Q8IU89 383 aa13.65□□□□□ -0.22
FAM60A-206ENST00000539409 SDR42E1Q8WUS8 393 aa13.65□□□□□ -0.22
FAM60A-206ENST00000539409 ECM29Q5VYK3 1845 aa13.65□□□□□ -0.22
FAM60A-206ENST00000539409 ZMYM6O95789 1325 aa13.65□□□□□ -0.22
FAM60A-206ENST00000539409 FGAP02671 866 aa13.65□□□□□ -0.22
FAM60A-206ENST00000539409 DDX60LQ5H9U9 1706 aaKnown RBP13.65□□□□□ -0.22
FAM60A-206ENST00000539409 APOBEC3HQ6NTF7 200 aaKnown RBP13.65□□□□□ -0.22
FAM60A-206ENST00000539409 KIF2CQ99661 725 aa13.65□□□□□ -0.22
FAM60A-206ENST00000539409 RPAP1Q9BWH6 1393 aaPredicted RBP13.65□□□□□ -0.22
FAM60A-206ENST00000539409 CRNKL1Q9BZJ0 848 aaKnown RBP13.65□□□□□ -0.22
FAM60A-206ENST00000539409 PCDHAC2Q9Y5I4 1007 aa13.65□□□□□ -0.22
FAM60A-206ENST00000539409 APPP05067 770 aa13.64□□□□□ -0.23
FAM60A-206ENST00000539409 USP17L8P0C7I0 530 aa13.64□□□□□ -0.23
FAM60A-206ENST00000539409 RPS12P25398 132 aaKnown RBP13.64□□□□□ -0.23
FAM60A-206ENST00000539409 CREB3L3Q68CJ9 461 aa13.64□□□□□ -0.23
FAM60A-206ENST00000539409 KCNB2Q92953 911 aa13.64□□□□□ -0.23
FAM60A-206ENST00000539409 RBM19Q9Y4C8 960 aaKnown RBP13.64□□□□□ -0.23
FAM60A-206ENST00000539409 GJA3Q9Y6H8 435 aa13.64□□□□□ -0.23
FAM60A-206ENST00000539409 NAV1Q8NEY1 1877 aa13.64□□□□□ -0.23
FAM60A-206ENST00000539409 BAZ2AQ9UIF9 1905 aaKnown RBP13.64□□□□□ -0.23
FAM60A-206ENST00000539409 SLC27A2O14975 620 aa13.64□□□□□ -0.23
FAM60A-206ENST00000539409 PLCG2P16885 1265 aa13.64□□□□□ -0.23
FAM60A-206ENST00000539409 ALX1Q15699 326 aa13.64□□□□□ -0.23
FAM60A-206ENST00000539409 RASEFQ8IZ41 740 aa13.64□□□□□ -0.23
FAM60A-206ENST00000539409 IFNL3Q8IZI9 196 aa13.64□□□□□ -0.23
FAM60A-206ENST00000539409 OGFOD1Q8N543 542 aa13.64□□□□□ -0.23
FAM60A-206ENST00000539409 GMPSP49915 693 aaPredicted RBP13.63□□□□□ -0.23
FAM60A-206ENST00000539409 IL17RAQ96F46 866 aa13.63□□□□□ -0.23
FAM60A-206ENST00000539409 HDAC9Q9UKV0 1011 aa13.63□□□□□ -0.23
FAM60A-206ENST00000539409 TAF6LQ9Y6J9 622 aa13.63□□□□□ -0.23
FAM60A-206ENST00000539409 CYP21A2P08686 494 aa13.63□□□□□ -0.23
FAM60A-206ENST00000539409 RBM5P52756 815 aaKnown RBP eCLIP13.63□□□□□ -0.231e-6■■□□□ 13.4
FAM60A-206ENST00000539409 ANAPC15P60006 121 aa13.63□□□□□ -0.23
FAM60A-206ENST00000539409 CFAP100Q494V2 611 aa13.63□□□□□ -0.23
FAM60A-206ENST00000539409 GPC2Q8N158 579 aa13.63□□□□□ -0.23
FAM60A-206ENST00000539409 NACAP1Q9BZK3 213 aa13.63□□□□□ -0.23
FAM60A-206ENST00000539409 NAPBQ9H115 298 aa13.63□□□□□ -0.23
FAM60A-206ENST00000539409 DCP1AQ9NPI6 582 aaPredicted RBP13.63□□□□□ -0.23
FAM60A-206ENST00000539409 SNX14Q9Y5W7 946 aa13.63□□□□□ -0.23
FAM60A-206ENST00000539409 LAMB1P07942 1786 aa13.63□□□□□ -0.23
FAM60A-206ENST00000539409 SHTN1A0MZ66 631 aa13.62□□□□□ -0.23
FAM60A-206ENST00000539409 CDC42EP5Q6NZY7 148 aa13.62□□□□□ -0.23
FAM60A-206ENST00000539409 GIMAP6Q6P9H5 292 aa13.62□□□□□ -0.23
FAM60A-206ENST00000539409 TEX11Q8IYF3 940 aa13.62□□□□□ -0.23
FAM60A-206ENST00000539409 DPF2Q92785 391 aa13.62□□□□□ -0.23
FAM60A-206ENST00000539409 ATP8A2Q9NTI2 1148 aa13.62□□□□□ -0.23
FAM60A-206ENST00000539409 MKRN1Q9UHC7 482 aaKnown RBP13.62□□□□□ -0.23
FAM60A-206ENST00000539409 CTNNA3Q9UI47 895 aa13.62□□□□□ -0.23
FAM60A-206ENST00000539409 TDO2P48775 406 aa13.62□□□□□ -0.23
FAM60A-206ENST00000539409 ZNF280AP59817 542 aaPredicted RBP13.62□□□□□ -0.23
FAM60A-206ENST00000539409 RNF20Q5VTR2 975 aa13.62□□□□□ -0.23
FAM60A-206ENST00000539409 SPDYE2BA6NHP3 402 aa13.61□□□□□ -0.23
FAM60A-206ENST00000539409 SPDYE6P0CI01 402 aa13.61□□□□□ -0.23
FAM60A-206ENST00000539409 TGFBRAP1Q8WUH2 860 aa13.61□□□□□ -0.23
FAM60A-206ENST00000539409 USP40Q9NVE5 1235 aa13.61□□□□□ -0.23
FAM60A-206ENST00000539409 WDHD1O75717 1129 aaPredicted RBP13.61□□□□□ -0.23
FAM60A-206ENST00000539409 ZKSCAN1P17029 563 aaPredicted RBP13.61□□□□□ -0.23
FAM60A-206ENST00000539409 USP5P45974 858 aa13.61□□□□□ -0.23
FAM60A-206ENST00000539409 MMP14P50281 582 aa13.61□□□□□ -0.23
FAM60A-206ENST00000539409 IMMTQ16891 758 aaKnown RBP13.61□□□□□ -0.23
FAM60A-206ENST00000539409 MICALL2Q8IY33 904 aa13.61□□□□□ -0.23
FAM60A-206ENST00000539409 MTMR14Q8NCE2 650 aa13.61□□□□□ -0.23
FAM60A-206ENST00000539409 PRMT6Q96LA8 375 aaPredicted RBP13.61□□□□□ -0.23
FAM60A-206ENST00000539409 NBPF3Q9H094 633 aa13.61□□□□□ -0.23
FAM60A-206ENST00000539409 FLT1P17948 1338 aa13.61□□□□□ -0.23
FAM60A-206ENST00000539409 ZC3H4Q9UPT8 1303 aaKnown RBP13.61□□□□□ -0.23
FAM60A-206ENST00000539409 HAND2P61296 217 aa13.6□□□□□ -0.23
FAM60A-206ENST00000539409 DLGAP5Q15398 846 aa13.6□□□□□ -0.23
FAM60A-206ENST00000539409 TSGA10IPQ3SY00 556 aa13.6□□□□□ -0.23
FAM60A-206ENST00000539409 ZBED3Q96IU2 234 aaPredicted RBP13.6□□□□□ -0.23
FAM60A-206ENST00000539409 MYOZ2Q9NPC6 264 aa13.6□□□□□ -0.23
FAM60A-206ENST00000539409 MAPKAPK5Q8IW41 473 aa13.6□□□□□ -0.23
FAM60A-206ENST00000539409 DDRGK1Q96HY6 314 aa13.6□□□□□ -0.23
FAM60A-206ENST00000539409 CNOT7Q9UIV1 285 aaKnown RBP13.6□□□□□ -0.23
FAM60A-206ENST00000539409 ZNF213O14771 459 aa13.59□□□□□ -0.23
FAM60A-206ENST00000539409 DDNO94850 711 aaPredicted RBP13.59□□□□□ -0.23
FAM60A-206ENST00000539409 ADCK5Q3MIX3 580 aa13.59□□□□□ -0.23
FAM60A-206ENST00000539409 CTR9Q6PD62 1173 aa13.59□□□□□ -0.23
FAM60A-206ENST00000539409 STOX1Q6ZVD7 989 aa13.59□□□□□ -0.23
FAM60A-206ENST00000539409 TDRD3Q9H7E2 651 aaKnown RBP13.59□□□□□ -0.23
FAM60A-206ENST00000539409 DDX4Q9NQI0 724 aaKnown RBP13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms