RNA–Protein interactions for RNA: ENST00000539049.5

DDX11-213, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 5

Gene DDX11, Length 3,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-213ENST00000539049 LRRIQ3A6PVS8 624 aaPredicted RBP12.47□□□□□ -0.41
DDX11-213ENST00000539049 MEFVO15553 781 aaPredicted RBP12.47□□□□□ -0.41
DDX11-213ENST00000539049 EPB41L2O43491 1005 aaKnown RBP12.47□□□□□ -0.41
DDX11-213ENST00000539049 SHOX2O60902 331 aaPredicted RBP12.47□□□□□ -0.41
DDX11-213ENST00000539049 MYL6BP14649 208 aa12.47□□□□□ -0.41
DDX11-213ENST00000539049 MPRIPQ6WCQ1 1025 aa12.47□□□□□ -0.41
DDX11-213ENST00000539049 CCDC85AQ96PX6 553 aaPredicted RBP12.47□□□□□ -0.41
DDX11-213ENST00000539049 CCDC8Q9H0W5 538 aaPredicted RBP12.47□□□□□ -0.41
DDX11-213ENST00000539049 LMCD1Q9NZU5 365 aa12.47□□□□□ -0.41
DDX11-213ENST00000539049 BIN2Q9UBW5 565 aaPredicted RBP12.47□□□□□ -0.41
DDX11-213ENST00000539049 VWA3AA6NCI4 1184 aa12.47□□□□□ -0.41
DDX11-213ENST00000539049 SSBP05455 408 aaKnown RBP eCLIP12.47□□□□□ -0.41
DDX11-213ENST00000539049 FLIIQ13045 1269 aa12.47□□□□□ -0.41
DDX11-213ENST00000539049 LAMB3Q13751 1172 aa12.47□□□□□ -0.41
DDX11-213ENST00000539049 TAF7Q15545 349 aaPredicted RBP12.47□□□□□ -0.41
DDX11-213ENST00000539049 RNF187Q5TA31 235 aaPredicted RBP12.47□□□□□ -0.41
DDX11-213ENST00000539049 CAPRIN2Q6IMN6 1127 aaKnown RBP12.47□□□□□ -0.41
DDX11-213ENST00000539049 BATF3Q9NR55 127 aa12.47□□□□□ -0.41
DDX11-213ENST00000539049 ACEP12821 1306 aa12.47□□□□□ -0.41
DDX11-213ENST00000539049 A0A087WWV3 80 aa12.47□□□□□ -0.41
DDX11-213ENST00000539049 NDUFAB1O14561 156 aa12.47□□□□□ -0.41
DDX11-213ENST00000539049 VSNL1P62760 191 aa12.47□□□□□ -0.41
DDX11-213ENST00000539049 TEFQ10587 303 aa12.47□□□□□ -0.41
DDX11-213ENST00000539049 FILIP1LQ4L180 1135 aa12.47□□□□□ -0.41
DDX11-213ENST00000539049 LARP1BQ659C4 914 aaKnown RBP12.47□□□□□ -0.41
DDX11-213ENST00000539049 CCDC50Q8IVM0 306 aa12.47□□□□□ -0.41
DDX11-213ENST00000539049 ANKRD44Q8N8A2 993 aa12.47□□□□□ -0.41
DDX11-213ENST00000539049 KIF20BQ96Q89 1820 aa12.47□□□□□ -0.41
DDX11-213ENST00000539049 RIMS2Q9UQ26 1411 aa12.47□□□□□ -0.41
DDX11-213ENST00000539049 GOLGA6L9A6NEM1 432 aa12.46□□□□□ -0.41
DDX11-213ENST00000539049 KIF4BQ2VIQ3 1234 aa12.46□□□□□ -0.41
DDX11-213ENST00000539049 PRPF40BQ6NWY9 871 aaKnown RBP12.46□□□□□ -0.41
DDX11-213ENST00000539049 MSANTD4Q8NCY6 345 aa12.46□□□□□ -0.41
DDX11-213ENST00000539049 KLHDC4Q8TBB5 520 aa12.46□□□□□ -0.41
DDX11-213ENST00000539049 CAPS2Q9BXY5 557 aa12.46□□□□□ -0.41
DDX11-213ENST00000539049 LRRC2Q9BYS8 371 aa12.46□□□□□ -0.41
DDX11-213ENST00000539049 EHD4Q9H223 541 aa12.46□□□□□ -0.41
DDX11-213ENST00000539049 PRPF6O94906 941 aaKnown RBP12.46□□□□□ -0.41
DDX11-213ENST00000539049 PDHBP11177 359 aa12.46□□□□□ -0.41
DDX11-213ENST00000539049 TLDC1Q6P9B6 456 aa12.46□□□□□ -0.41
DDX11-213ENST00000539049 MICALCLQ6ZW33 695 aa12.46□□□□□ -0.41
DDX11-213ENST00000539049 IRX2Q9BZI1 471 aaPredicted RBP12.46□□□□□ -0.41
DDX11-213ENST00000539049 TPCN1Q9ULQ1 816 aa12.46□□□□□ -0.41
DDX11-213ENST00000539049 PPP2R2CQ9Y2T4 447 aa12.46□□□□□ -0.41
DDX11-213ENST00000539049 RTN3O95197 1032 aaPredicted RBP12.46□□□□□ -0.42
DDX11-213ENST00000539049 CC2D2BQ6DHV5 1058 aa12.46□□□□□ -0.42
DDX11-213ENST00000539049 RUFY3Q7L099 469 aa12.46□□□□□ -0.42
DDX11-213ENST00000539049 MAB21L3Q8N8X9 362 aa12.46□□□□□ -0.42
DDX11-213ENST00000539049 B4GALNT2Q8NHY0 566 aa12.46□□□□□ -0.42
DDX11-213ENST00000539049 LEO1Q8WVC0 666 aaPredicted RBP12.46□□□□□ -0.42
DDX11-213ENST00000539049 TCP11Q8WWU5 503 aa12.46□□□□□ -0.42
DDX11-213ENST00000539049 EZH1Q92800 747 aaPredicted RBP12.46□□□□□ -0.42
DDX11-213ENST00000539049 RMI1Q9H9A7 625 aa12.46□□□□□ -0.42
DDX11-213ENST00000539049 CLTCQ00610 1675 aaKnown RBP12.46□□□□□ -0.42
DDX11-213ENST00000539049 SYF2O95926 243 aaKnown RBP12.45□□□□□ -0.42
DDX11-213ENST00000539049 GNGT1P63211 74 aa12.45□□□□□ -0.42
DDX11-213ENST00000539049 NCAPG2Q86XI2 1143 aa12.45□□□□□ -0.42
DDX11-213ENST00000539049 MYLK4Q86YV6 388 aaPredicted RBP12.45□□□□□ -0.42
DDX11-213ENST00000539049 JAKMIP1Q96N16 626 aaKnown RBP12.45□□□□□ -0.42
DDX11-213ENST00000539049 YIPF3Q9GZM5 350 aa12.45□□□□□ -0.42
DDX11-213ENST00000539049 TTC21AQ8NDW8 1320 aa12.45□□□□□ -0.42
DDX11-213ENST00000539049 MYO5BQ9ULV0 1848 aa12.45□□□□□ -0.42
DDX11-213ENST00000539049 GOLGA6CA6NDK9 693 aa12.45□□□□□ -0.42
DDX11-213ENST00000539049 CUTAO60888 179 aa12.45□□□□□ -0.42
DDX11-213ENST00000539049 GOLGA6DP0CG33 693 aa12.45□□□□□ -0.42
DDX11-213ENST00000539049 PYGBP11216 843 aa12.45□□□□□ -0.42
DDX11-213ENST00000539049 SLC8A1P32418 973 aa12.45□□□□□ -0.42
DDX11-213ENST00000539049 PPP1R42Q7Z4L9 355 aa12.45□□□□□ -0.42
DDX11-213ENST00000539049 SPATS2Q86XZ4 545 aaKnown RBP12.45□□□□□ -0.42
DDX11-213ENST00000539049 RAB11FIP4Q86YS3 637 aa12.45□□□□□ -0.42
DDX11-213ENST00000539049 OR8K1Q8NGG5 319 aa12.45□□□□□ -0.42
DDX11-213ENST00000539049 SLC40A1Q9NP59 571 aa12.45□□□□□ -0.42
DDX11-213ENST00000539049 GOLGA6AQ9NYA3 693 aa12.45□□□□□ -0.42
DDX11-213ENST00000539049 PCDHGA4Q9Y5G9 962 aa12.45□□□□□ -0.42
DDX11-213ENST00000539049 EIF3HO15372 352 aaKnown RBP eCLIP12.45□□□□□ -0.42
DDX11-213ENST00000539049 POLD1P28340 1107 aa12.45□□□□□ -0.42
DDX11-213ENST00000539049 PPFIA1Q13136 1202 aa12.45□□□□□ -0.42
DDX11-213ENST00000539049 SPATA21Q7Z572 469 aa12.45□□□□□ -0.42
DDX11-213ENST00000539049 PARP9Q8IXQ6 854 aa12.45□□□□□ -0.42
DDX11-213ENST00000539049 RIN2Q8WYP3 895 aaPredicted RBP12.45□□□□□ -0.42
DDX11-213ENST00000539049 BOLA2Q9H3K6 86 aa12.45□□□□□ -0.42
DDX11-213ENST00000539049 ATXN2Q99700 1313 aaKnown RBP12.45□□□□□ -0.42
DDX11-213ENST00000539049 KNDC1Q76NI1 1749 aa12.45□□□□□ -0.42
DDX11-213ENST00000539049 USP4Q13107 963 aa12.44□□□□□ -0.42
DDX11-213ENST00000539049 SLC30A9Q6PML9 568 aa12.44□□□□□ -0.42
DDX11-213ENST00000539049 CDC37L1Q7L3B6 337 aa12.44□□□□□ -0.42
DDX11-213ENST00000539049 RPAP2Q8IXW5 612 aaPredicted RBP12.44□□□□□ -0.42
DDX11-213ENST00000539049 PICK1Q9NRD5 415 aa12.44□□□□□ -0.42
DDX11-213ENST00000539049 PI4KAP2A4QPH2 592 aa12.44□□□□□ -0.42
DDX11-213ENST00000539049 RASSF9O75901 435 aa12.44□□□□□ -0.42
DDX11-213ENST00000539049 IMPDH2P12268 514 aa12.44□□□□□ -0.42
DDX11-213ENST00000539049 AARSP49588 968 aaKnown RBP eCLIP12.44□□□□□ -0.429e-8■■■■□ 21.8
DDX11-213ENST00000539049 FCHSD1Q86WN1 690 aa12.44□□□□□ -0.42
DDX11-213ENST00000539049 PI4KAP1Q8N8J0 262 aa12.44□□□□□ -0.42
DDX11-213ENST00000539049 VCPKMTQ9H867 229 aa12.44□□□□□ -0.42
DDX11-213ENST00000539049 ATP10DQ9P241 1426 aa12.44□□□□□ -0.42
DDX11-213ENST00000539049 KIF24Q5T7B8 1368 aa12.44□□□□□ -0.42
DDX11-213ENST00000539049 KCNQ3O43525 872 aa12.43□□□□□ -0.42
DDX11-213ENST00000539049 ZNF202O95125 648 aa12.43□□□□□ -0.42
DDX11-213ENST00000539049 TUBBP07437 444 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 103.9 ms