RNA–Protein interactions for RNA: ENST00000537551.5

CHFR-215, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 596 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-215ENST00000537551 IFIT2P09913 472 aaKnown RBP28.43■■■□□ 2.14
CHFR-215ENST00000537551 FZD1Q9UP38 647 aa28.43■■■□□ 2.14
CHFR-215ENST00000537551 GSTO1P78417 241 aa28.42■■■□□ 2.14
CHFR-215ENST00000537551 FKBP1CQ5VVH2 108 aa28.42■■■□□ 2.14
CHFR-215ENST00000537551 LDHCP07864 332 aa28.41■■■□□ 2.14
CHFR-215ENST00000537551 ZAP70P43403 619 aa28.41■■■□□ 2.14
CHFR-215ENST00000537551 FAM83AQ86UY5 434 aa28.41■■■□□ 2.14
CHFR-215ENST00000537551 BEGAINQ9BUH8 593 aa28.41■■■□□ 2.14
CHFR-215ENST00000537551 WBP1LQ9NX94 342 aa28.41■■■□□ 2.14
CHFR-215ENST00000537551 ZBTB4Q9P1Z0 1013 aaPredicted RBP28.41■■■□□ 2.14
CHFR-215ENST00000537551 GAKO14976 1311 aa28.41■■■□□ 2.14
CHFR-215ENST00000537551 FAM155AB1AL88 458 aaPredicted RBP28.4■■■□□ 2.14
CHFR-215ENST00000537551 SLC10A3P09131 477 aa28.4■■■□□ 2.14
CHFR-215ENST00000537551 NSUN4Q96CB9 384 aaKnown RBP28.4■■■□□ 2.14
CHFR-215ENST00000537551 FAM163AQ96GL9 167 aaPredicted RBP28.4■■■□□ 2.14
CHFR-215ENST00000537551 TEPSINQ96N21 525 aa28.4■■■□□ 2.14
CHFR-215ENST00000537551 CYP2E1P05181 493 aaPredicted RBP28.39■■■□□ 2.14
CHFR-215ENST00000537551 BTDP43251 543 aa28.39■■■□□ 2.14
CHFR-215ENST00000537551 RASAL3Q86YV0 1011 aa28.39■■■□□ 2.14
CHFR-215ENST00000537551 CDAN1Q8IWY9 1227 aa28.39■■■□□ 2.14
CHFR-215ENST00000537551 LRRCC1Q9C099 1032 aa28.39■■■□□ 2.14
CHFR-215ENST00000537551 PCDHB15Q9Y5E8 787 aa28.39■■■□□ 2.14
CHFR-215ENST00000537551 MYH2Q9UKX2 1941 aa28.39■■■□□ 2.13
CHFR-215ENST00000537551 MROH7-TTC4A0A0A0MT08 1334 aa28.39■■■□□ 2.13
CHFR-215ENST00000537551 IREB2P48200 963 aaKnown RBP28.38■■■□□ 2.13
CHFR-215ENST00000537551 TCP10Q12799 353 aa28.38■■■□□ 2.13
CHFR-215ENST00000537551 ZIC5Q96T25 663 aa28.38■■■□□ 2.13
CHFR-215ENST00000537551 SSC5DA1L4H1 1573 aa28.37■■■□□ 2.13
CHFR-215ENST00000537551 USP2O75604 605 aaPredicted RBP28.37■■■□□ 2.13
CHFR-215ENST00000537551 MAP3K11Q16584 847 aa28.37■■■□□ 2.13
CHFR-215ENST00000537551 LDLRAD1Q5T700 205 aa28.37■■■□□ 2.13
CHFR-215ENST00000537551 DCTPP1Q9H773 170 aa28.37■■■□□ 2.13
CHFR-215ENST00000537551 KIF23Q02241 960 aaPredicted RBP28.36■■■□□ 2.13
CHFR-215ENST00000537551 NFIAQ12857 509 aa28.36■■■□□ 2.13
CHFR-215ENST00000537551 NAA16Q6N069 864 aaPredicted RBP28.36■■■□□ 2.13
CHFR-215ENST00000537551 ZNF384Q8TF68 577 aa28.36■■■□□ 2.13
CHFR-215ENST00000537551 FAM151AQ8WW52 585 aa28.36■■■□□ 2.13
CHFR-215ENST00000537551 GPR75-ASB3A0A0A6YYF3 556 aa28.35■■■□□ 2.13
CHFR-215ENST00000537551 FOXN1O15353 648 aa28.35■■■□□ 2.13
CHFR-215ENST00000537551 HOOK2Q96ED9 719 aa28.35■■■□□ 2.13
CHFR-215ENST00000537551 SLC10A4Q96EP9 437 aa28.35■■■□□ 2.13
CHFR-215ENST00000537551 NOL10Q9BSC4 688 aaKnown RBP28.35■■■□□ 2.13
CHFR-215ENST00000537551 PIH1D3Q9NQM4 214 aaKnown RBP28.35■■■□□ 2.13
CHFR-215ENST00000537551 NDUFB9Q9Y6M9 179 aa28.35■■■□□ 2.13
CHFR-215ENST00000537551 PCNTO95613 3336 aa28.35■■■□□ 2.13
CHFR-215ENST00000537551 AKAP11Q9UKA4 1901 aa28.35■■■□□ 2.13
CHFR-215ENST00000537551 SMARCA5O60264 1052 aaPredicted RBP28.34■■■□□ 2.13
CHFR-215ENST00000537551 THSD7BQ9C0I4 1608 aa28.33■■■□□ 2.13
CHFR-215ENST00000537551 FAM198AQ9UFP1 575 aa28.33■■■□□ 2.13
CHFR-215ENST00000537551 SUPT16HQ9Y5B9 1047 aaKnown RBP28.33■■■□□ 2.13
CHFR-215ENST00000537551 IDH1O75874 414 aaKnown RBP28.32■■■□□ 2.12
CHFR-215ENST00000537551 CTCFP49711 727 aaPredicted RBP28.32■■■□□ 2.12
CHFR-215ENST00000537551 RGS3P49796 1198 aa28.32■■■□□ 2.12
CHFR-215ENST00000537551 MKRN3Q13064 507 aaKnown RBP28.32■■■□□ 2.12
CHFR-215ENST00000537551 ANKRD13AQ8IZ07 590 aa28.32■■■□□ 2.12
CHFR-215ENST00000537551 IDI2Q9BXS1 227 aa28.32■■■□□ 2.12
CHFR-215ENST00000537551 UNCXA6NJT0 531 aa28.31■■■□□ 2.12
CHFR-215ENST00000537551 IGSF3O75054 1194 aa28.31■■■□□ 2.12
CHFR-215ENST00000537551 PICALMQ13492 652 aa28.31■■■□□ 2.12
CHFR-215ENST00000537551 CLMNQ96JQ2 1002 aa28.31■■■□□ 2.12
CHFR-215ENST00000537551 ANTXR1Q9H6X2 564 aa28.31■■■□□ 2.12
CHFR-215ENST00000537551 RPAP1Q9BWH6 1393 aaPredicted RBP28.3■■■□□ 2.12
CHFR-215ENST00000537551 ENTPD3O75355 529 aa28.3■■■□□ 2.12
CHFR-215ENST00000537551 BAG3O95817 575 aa28.3■■■□□ 2.12
CHFR-215ENST00000537551 DCAF15Q66K64 600 aa28.3■■■□□ 2.12
CHFR-215ENST00000537551 PPIL4Q8WUA2 492 aaKnown RBP eCLIP28.3■■■□□ 2.12
CHFR-215ENST00000537551 DNAJC2Q99543 621 aaKnown RBP28.3■■■□□ 2.12
CHFR-215ENST00000537551 RHBDL3P58872 404 aa28.29■■■□□ 2.12
CHFR-215ENST00000537551 MAP3K9P80192 1104 aa28.29■■■□□ 2.12
CHFR-215ENST00000537551 MAP3K12Q12852 859 aa28.29■■■□□ 2.12
CHFR-215ENST00000537551 TTF1Q15361 905 aaPredicted RBP28.29■■■□□ 2.12
CHFR-215ENST00000537551 MIGA2Q7L4E1 593 aa28.29■■■□□ 2.12
CHFR-215ENST00000537551 ZSCAN29Q8IWY8 852 aaPredicted RBP28.29■■■□□ 2.12
CHFR-215ENST00000537551 ZFPM1Q8IX07 1006 aa28.29■■■□□ 2.12
CHFR-215ENST00000537551 REM2Q8IYK8 340 aaPredicted RBP28.29■■■□□ 2.12
CHFR-215ENST00000537551 CSRNP1Q96S65 589 aa28.29■■■□□ 2.12
CHFR-215ENST00000537551 WDHD1O75717 1129 aaPredicted RBP28.28■■■□□ 2.12
CHFR-215ENST00000537551 MAP4K4O95819 1239 aaPredicted RBP28.28■■■□□ 2.12
CHFR-215ENST00000537551 CYP7A1P22680 504 aa28.28■■■□□ 2.12
CHFR-215ENST00000537551 AATFQ9NY61 560 aaKnown RBP eCLIP28.28■■■□□ 2.12
CHFR-215ENST00000537551 AAMPQ13685 434 aa28.27■■■□□ 2.12
CHFR-215ENST00000537551 SPRYD7Q5W111 196 aa28.27■■■□□ 2.12
CHFR-215ENST00000537551 BOLA2Q9H3K6 86 aa28.27■■■□□ 2.12
CHFR-215ENST00000537551 CSADQ9Y600 493 aa28.27■■■□□ 2.12
CHFR-215ENST00000537551 AK9Q5TCS8 1911 aa28.27■■■□□ 2.12
CHFR-215ENST00000537551 GOLIM4O00461 696 aa28.26■■■□□ 2.11
CHFR-215ENST00000537551 CA12O43570 354 aa28.26■■■□□ 2.11
CHFR-215ENST00000537551 ATP5JP18859 108 aa28.26■■■□□ 2.11
CHFR-215ENST00000537551 TEX11Q8IYF3 940 aa28.26■■■□□ 2.11
CHFR-215ENST00000537551 MAGEB6Q8N7X4 407 aa28.26■■■□□ 2.11
CHFR-215ENST00000537551 ZNF341Q9BYN7 854 aa28.26■■■□□ 2.11
CHFR-215ENST00000537551 ELP3Q9H9T3 547 aa28.26■■■□□ 2.11
CHFR-215ENST00000537551 DDX4Q9NQI0 724 aaKnown RBP28.26■■■□□ 2.11
CHFR-215ENST00000537551 PLCG2P16885 1265 aa28.25■■■□□ 2.11
CHFR-215ENST00000537551 LBX1P52954 281 aa28.25■■■□□ 2.11
CHFR-215ENST00000537551 PPP1R3FQ6ZSY5 799 aaPredicted RBP28.25■■■□□ 2.11
CHFR-215ENST00000537551 DDX55Q8NHQ9 600 aaKnown RBP eCLIP28.25■■■□□ 2.11
CHFR-215ENST00000537551 SH3RF3Q8TEJ3 882 aaPredicted RBP28.25■■■□□ 2.11
CHFR-215ENST00000537551 WNK4Q96J92 1243 aa28.25■■■□□ 2.11
CHFR-215ENST00000537551 WRNIP1Q96S55 665 aa28.25■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms