RNA–Protein interactions for RNA: ENST00000537466.6

GPN3-202, Transcript of GPN-loop GTPase 3, humanhuman

TSL 1 (best) BASIC

Gene GPN3, Length 1,491 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-202ENST00000537466 TMOD2Q9NZR1 351 aa21.21■□□□□ 0.99
GPN3-202ENST00000537466 PCDHB15Q9Y5E8 787 aa21.21■□□□□ 0.99
GPN3-202ENST00000537466 GAKO14976 1311 aa21.21■□□□□ 0.99
GPN3-202ENST00000537466 CYP2E1P05181 493 aaPredicted RBP21.2■□□□□ 0.98
GPN3-202ENST00000537466 ZAP70P43403 619 aa21.2■□□□□ 0.98
GPN3-202ENST00000537466 TNNI2P48788 182 aa21.2■□□□□ 0.98
GPN3-202ENST00000537466 CLASRPQ8N2M8 674 aaKnown RBP21.2■□□□□ 0.98
GPN3-202ENST00000537466 ANGEL1Q9UNK9 670 aaKnown RBP21.2■□□□□ 0.98
GPN3-202ENST00000537466 CDK5RAP2Q96SN8 1893 aa21.2■□□□□ 0.98
GPN3-202ENST00000537466 SUPT20HL1Q3ZLR7 823 aa21.2■□□□□ 0.98
GPN3-202ENST00000537466 NSUN4Q96CB9 384 aaKnown RBP21.2■□□□□ 0.98
GPN3-202ENST00000537466 RAI14Q9P0K7 980 aa21.2■□□□□ 0.98
GPN3-202ENST00000537466 SLC10A3P09131 477 aa21.19■□□□□ 0.98
GPN3-202ENST00000537466 MAP2K2P36507 400 aa21.19■□□□□ 0.98
GPN3-202ENST00000537466 FKBP1CQ5VVH2 108 aa21.19■□□□□ 0.98
GPN3-202ENST00000537466 ARMC9Q7Z3E5 817 aa21.19■□□□□ 0.98
GPN3-202ENST00000537466 RASAL3Q86YV0 1011 aa21.19■□□□□ 0.98
GPN3-202ENST00000537466 FAM163AQ96GL9 167 aaPredicted RBP21.19■□□□□ 0.98
GPN3-202ENST00000537466 USP40Q9NVE5 1235 aa21.19■□□□□ 0.98
GPN3-202ENST00000537466 WBP1LQ9NX94 342 aa21.19■□□□□ 0.98
GPN3-202ENST00000537466 NDUFB9Q9Y6M9 179 aa21.19■□□□□ 0.98
GPN3-202ENST00000537466 MROH7-TTC4A0A0A0MT08 1334 aa21.19■□□□□ 0.98
GPN3-202ENST00000537466 NFIAQ12857 509 aa21.18■□□□□ 0.98
GPN3-202ENST00000537466 FAM83AQ86UY5 434 aa21.18■□□□□ 0.98
GPN3-202ENST00000537466 SLF2Q8IX21 1173 aa21.18■□□□□ 0.98
GPN3-202ENST00000537466 CCDC102AQ96A19 550 aa21.18■□□□□ 0.98
GPN3-202ENST00000537466 LRP2BPQ9P2M1 347 aa21.18■□□□□ 0.98
GPN3-202ENST00000537466 SMARCA5O60264 1052 aaPredicted RBP21.17■□□□□ 0.98
GPN3-202ENST00000537466 IFIT2P09913 472 aaKnown RBP21.17■□□□□ 0.98
GPN3-202ENST00000537466 BTDP43251 543 aa21.17■□□□□ 0.98
GPN3-202ENST00000537466 NOGQ13253 232 aa21.17■□□□□ 0.98
GPN3-202ENST00000537466 MAP3K11Q16584 847 aa21.17■□□□□ 0.98
GPN3-202ENST00000537466 LDLRAD1Q5T700 205 aa21.17■□□□□ 0.98
GPN3-202ENST00000537466 DCTPP1Q9H773 170 aa21.17■□□□□ 0.98
GPN3-202ENST00000537466 PIH1D3Q9NQM4 214 aaKnown RBP21.17■□□□□ 0.98
GPN3-202ENST00000537466 PPP1R12BO60237 982 aaPredicted RBP21.16■□□□□ 0.98
GPN3-202ENST00000537466 USP2O75604 605 aaPredicted RBP21.16■□□□□ 0.98
GPN3-202ENST00000537466 MAP2K1Q02750 393 aaPredicted RBP21.16■□□□□ 0.98
GPN3-202ENST00000537466 LRRCC1Q9C099 1032 aa21.16■□□□□ 0.98
GPN3-202ENST00000537466 FAM198AQ9UFP1 575 aa21.16■□□□□ 0.98
GPN3-202ENST00000537466 FOCADQ5VW36 1801 aa21.15■□□□□ 0.98
GPN3-202ENST00000537466 LAMB1P07942 1786 aa21.15■□□□□ 0.98
GPN3-202ENST00000537466 RFX7Q2KHR2 1363 aa21.15■□□□□ 0.98
GPN3-202ENST00000537466 RPAP1Q9BWH6 1393 aaPredicted RBP21.15■□□□□ 0.98
GPN3-202ENST00000537466 GPR75-ASB3A0A0A6YYF3 556 aa21.15■□□□□ 0.98
GPN3-202ENST00000537466 FOXN1O15353 648 aa21.15■□□□□ 0.98
GPN3-202ENST00000537466 TCP10Q12799 353 aa21.15■□□□□ 0.98
GPN3-202ENST00000537466 ANTXR1Q9H6X2 564 aa21.15■□□□□ 0.98
GPN3-202ENST00000537466 GSTO1P78417 241 aa21.14■□□□□ 0.98
GPN3-202ENST00000537466 FAM151AQ8WW52 585 aa21.14■□□□□ 0.98
GPN3-202ENST00000537466 SUPT16HQ9Y5B9 1047 aaKnown RBP21.14■□□□□ 0.98
GPN3-202ENST00000537466 LDHCP07864 332 aa21.13■□□□□ 0.97
GPN3-202ENST00000537466 KIF23Q02241 960 aaPredicted RBP21.13■□□□□ 0.97
GPN3-202ENST00000537466 ZFPM1Q8IX07 1006 aa21.13■□□□□ 0.97
GPN3-202ENST00000537466 CLMNQ96JQ2 1002 aa21.13■□□□□ 0.97
GPN3-202ENST00000537466 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.13■□□□□ 0.97
GPN3-202ENST00000537466 MYH7P12883 1935 aa21.13■□□□□ 0.97
GPN3-202ENST00000537466 WDHD1O75717 1129 aaPredicted RBP21.13■□□□□ 0.97
GPN3-202ENST00000537466 RHBDL3P58872 404 aa21.13■□□□□ 0.97
GPN3-202ENST00000537466 NAA16Q6N069 864 aaPredicted RBP21.13■□□□□ 0.97
GPN3-202ENST00000537466 ADGRA1Q86SQ6 560 aa21.13■□□□□ 0.97
GPN3-202ENST00000537466 IDI2Q9BXS1 227 aa21.13■□□□□ 0.97
GPN3-202ENST00000537466 IREB2P48200 963 aaKnown RBP21.12■□□□□ 0.97
GPN3-202ENST00000537466 RGS3P49796 1198 aa21.12■□□□□ 0.97
GPN3-202ENST00000537466 AIDAQ96BJ3 306 aa21.12■□□□□ 0.97
GPN3-202ENST00000537466 DDX4Q9NQI0 724 aaKnown RBP21.12■□□□□ 0.97
GPN3-202ENST00000537466 MKRN3Q13064 507 aaKnown RBP21.11■□□□□ 0.97
GPN3-202ENST00000537466 IDH1O75874 414 aaKnown RBP21.1■□□□□ 0.97
GPN3-202ENST00000537466 PICALMQ13492 652 aa21.1■□□□□ 0.97
GPN3-202ENST00000537466 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.1■□□□□ 0.97
GPN3-202ENST00000537466 ENTPD3O75355 529 aa21.09■□□□□ 0.97
GPN3-202ENST00000537466 MIGA2Q7L4E1 593 aa21.09■□□□□ 0.97
GPN3-202ENST00000537466 ANKRD13AQ8IZ07 590 aa21.09■□□□□ 0.97
GPN3-202ENST00000537466 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.09■□□□□ 0.97
GPN3-202ENST00000537466 EXOC6Q8TAG9 804 aa21.09■□□□□ 0.97
GPN3-202ENST00000537466 SLC10A4Q96EP9 437 aa21.09■□□□□ 0.97
GPN3-202ENST00000537466 CSRNP1Q96S65 589 aa21.09■□□□□ 0.97
GPN3-202ENST00000537466 DNAJC2Q99543 621 aaKnown RBP21.09■□□□□ 0.97
GPN3-202ENST00000537466 AATFQ9NY61 560 aaKnown RBP eCLIP21.09■□□□□ 0.97
GPN3-202ENST00000537466 UNCXA6NJT0 531 aa21.08■□□□□ 0.97
GPN3-202ENST00000537466 SPRYD7Q5W111 196 aa21.08■□□□□ 0.97
GPN3-202ENST00000537466 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.08■□□□□ 0.97
GPN3-202ENST00000537466 SH3BP5LQ7L8J4 393 aa21.08■□□□□ 0.97
GPN3-202ENST00000537466 SH3RF3Q8TEJ3 882 aaPredicted RBP21.08■□□□□ 0.97
GPN3-202ENST00000537466 EDC3Q96F86 508 aaKnown RBP21.08■□□□□ 0.97
GPN3-202ENST00000537466 BEGAINQ9BUH8 593 aa21.08■□□□□ 0.97
GPN3-202ENST00000537466 BOLA2Q9H3K6 86 aa21.08■□□□□ 0.97
GPN3-202ENST00000537466 TSKSQ9UJT2 592 aa21.08■□□□□ 0.97
GPN3-202ENST00000537466 IGSF3O75054 1194 aa21.07■□□□□ 0.96
GPN3-202ENST00000537466 HSPA8P11142 646 aaKnown RBP21.07■□□□□ 0.96
GPN3-202ENST00000537466 ATP5JP18859 108 aa21.07■□□□□ 0.96
GPN3-202ENST00000537466 MAGEB6Q8N7X4 407 aa21.07■□□□□ 0.96
GPN3-202ENST00000537466 HOOK2Q96ED9 719 aa21.07■□□□□ 0.96
GPN3-202ENST00000537466 SIPA1L1O43166 1804 aa21.07■□□□□ 0.96
GPN3-202ENST00000537466 DDTLA6NHG4 134 aaPredicted RBP21.07■□□□□ 0.96
GPN3-202ENST00000537466 GOLIM4O00461 696 aa21.07■□□□□ 0.96
GPN3-202ENST00000537466 CYP7A1P22680 504 aa21.07■□□□□ 0.96
GPN3-202ENST00000537466 CTCFP49711 727 aaPredicted RBP21.07■□□□□ 0.96
GPN3-202ENST00000537466 VGLL4Q14135 290 aa21.07■□□□□ 0.96
GPN3-202ENST00000537466 WNK4Q96J92 1243 aa21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms