RNA–Protein interactions for RNA: ENST00000537194.6

SMAD3-203, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,147 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-203ENST00000537194 FBXO3Q9UK99 471 aa11.14□□□□□ -0.63
SMAD3-203ENST00000537194 PTCH2Q9Y6C5 1203 aa11.14□□□□□ -0.63
SMAD3-203ENST00000537194 RPAP1Q9BWH6 1393 aaPredicted RBP11.14□□□□□ -0.63
SMAD3-203ENST00000537194 BTBD19C9JJ37 291 aa11.13□□□□□ -0.63
SMAD3-203ENST00000537194 UBTFL1P0CB47 393 aaPredicted RBP11.13□□□□□ -0.63
SMAD3-203ENST00000537194 LACTBP83111 547 aaPredicted RBP11.13□□□□□ -0.63
SMAD3-203ENST00000537194 APOBEC3HQ6NTF7 200 aaKnown RBP11.13□□□□□ -0.63
SMAD3-203ENST00000537194 MIGA2Q7L4E1 593 aa11.13□□□□□ -0.63
SMAD3-203ENST00000537194 CDAN1Q8IWY9 1227 aa11.13□□□□□ -0.63
SMAD3-203ENST00000537194 VGLL2Q8N8G2 317 aa11.13□□□□□ -0.63
SMAD3-203ENST00000537194 NKX2-3Q8TAU0 364 aa11.13□□□□□ -0.63
SMAD3-203ENST00000537194 KLHDC4Q8TBB5 520 aa11.13□□□□□ -0.63
SMAD3-203ENST00000537194 RAET1EQ8TD07 263 aa11.13□□□□□ -0.63
SMAD3-203ENST00000537194 ZKSCAN4Q969J2 545 aaPredicted RBP11.13□□□□□ -0.63
SMAD3-203ENST00000537194 SNCAIPQ9Y6H5 919 aa11.13□□□□□ -0.63
SMAD3-203ENST00000537194 CEP290O15078 2479 aa11.13□□□□□ -0.63
SMAD3-203ENST00000537194 FMNL1O95466 1100 aaPredicted RBP11.12□□□□□ -0.63
SMAD3-203ENST00000537194 MYCP01106 439 aaPredicted RBP11.12□□□□□ -0.63
SMAD3-203ENST00000537194 FGFR2P21802 821 aa11.12□□□□□ -0.63
SMAD3-203ENST00000537194 TCP10Q12799 353 aa11.12□□□□□ -0.63
SMAD3-203ENST00000537194 GRIK5Q16478 980 aa11.12□□□□□ -0.63
SMAD3-203ENST00000537194 ATP2B3Q16720 1220 aa11.12□□□□□ -0.63
SMAD3-203ENST00000537194 ALDH1L2Q3SY69 923 aa11.12□□□□□ -0.63
SMAD3-203ENST00000537194 HABP4Q5JVS0 413 aaKnown RBP11.12□□□□□ -0.63
SMAD3-203ENST00000537194 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.12□□□□□ -0.63
SMAD3-203ENST00000537194 USP44Q9H0E7 712 aa11.12□□□□□ -0.63
SMAD3-203ENST00000537194 PICK1Q9NRD5 415 aa11.12□□□□□ -0.63
SMAD3-203ENST00000537194 SMC4Q9NTJ3 1288 aa11.12□□□□□ -0.63
SMAD3-203ENST00000537194 BIN2Q9UBW5 565 aaPredicted RBP11.12□□□□□ -0.63
SMAD3-203ENST00000537194 DENND2AQ9ULE3 1009 aa11.12□□□□□ -0.63
SMAD3-203ENST00000537194 PDHXO00330 501 aa11.11□□□□□ -0.63
SMAD3-203ENST00000537194 SEMA3EO15041 775 aa11.11□□□□□ -0.63
SMAD3-203ENST00000537194 CIAO1O76071 339 aa11.11□□□□□ -0.63
SMAD3-203ENST00000537194 PSMC4P43686 418 aa11.11□□□□□ -0.63
SMAD3-203ENST00000537194 SPTY2D1Q68D10 685 aaPredicted RBP11.11□□□□□ -0.63
SMAD3-203ENST00000537194 ANKRD23Q86SG2 305 aa11.11□□□□□ -0.63
SMAD3-203ENST00000537194 ZSCAN29Q8IWY8 852 aaPredicted RBP11.11□□□□□ -0.63
SMAD3-203ENST00000537194 SSH1Q8WYL5 1049 aa11.11□□□□□ -0.63
SMAD3-203ENST00000537194 PARK7Q99497 189 aaKnown RBP11.11□□□□□ -0.63
SMAD3-203ENST00000537194 USP40Q9NVE5 1235 aa11.11□□□□□ -0.63
SMAD3-203ENST00000537194 DAGLAQ9Y4D2 1042 aa11.11□□□□□ -0.63
SMAD3-203ENST00000537194 LRRFIP2Q9Y608 721 aaKnown RBP11.11□□□□□ -0.63
SMAD3-203ENST00000537194 MYH2Q9UKX2 1941 aa11.11□□□□□ -0.63
SMAD3-203ENST00000537194 INPP5BP32019 993 aa11.1□□□□□ -0.63
SMAD3-203ENST00000537194 IL15P40933 162 aaPredicted RBP11.1□□□□□ -0.63
SMAD3-203ENST00000537194 UBXN2AP68543 259 aa11.1□□□□□ -0.63
SMAD3-203ENST00000537194 CDC42EP5Q6NZY7 148 aa11.1□□□□□ -0.63
SMAD3-203ENST00000537194 FASTKD5Q7L8L6 764 aaKnown RBP11.1□□□□□ -0.63
SMAD3-203ENST00000537194 DZIP1Q86YF9 867 aaKnown RBP11.1□□□□□ -0.63
SMAD3-203ENST00000537194 TRIM47Q96LD4 638 aa11.1□□□□□ -0.63
SMAD3-203ENST00000537194 API5Q9BZZ5 524 aaKnown RBP11.1□□□□□ -0.63
SMAD3-203ENST00000537194 SIL1Q9H173 461 aa11.1□□□□□ -0.63
SMAD3-203ENST00000537194 SRRDQ9UH36 339 aa11.1□□□□□ -0.63
SMAD3-203ENST00000537194 CPA4Q9UI42 421 aa11.1□□□□□ -0.63
SMAD3-203ENST00000537194 CXCL11O14625 94 aa11.09□□□□□ -0.63
SMAD3-203ENST00000537194 CT47B1P0C2W7 299 aaPredicted RBP11.09□□□□□ -0.63
SMAD3-203ENST00000537194 FCGRTP55899 365 aa11.09□□□□□ -0.63
SMAD3-203ENST00000537194 DIXDC1Q155Q3 683 aa11.09□□□□□ -0.63
SMAD3-203ENST00000537194 NOL9Q5SY16 702 aaKnown RBP11.09□□□□□ -0.63
SMAD3-203ENST00000537194 SH3TC2Q8TF17 1288 aa11.09□□□□□ -0.63
SMAD3-203ENST00000537194 DPF3Q92784 378 aa11.09□□□□□ -0.63
SMAD3-203ENST00000537194 KCNH4Q9UQ05 1017 aa11.09□□□□□ -0.63
SMAD3-203ENST00000537194 AKAP2Q9Y2D5 859 aa11.09□□□□□ -0.63
SMAD3-203ENST00000537194 ZNF521Q96K83 1311 aa11.09□□□□□ -0.63
SMAD3-203ENST00000537194 ENTPD3O75355 529 aa11.08□□□□□ -0.64
SMAD3-203ENST00000537194 ECM2O94769 699 aaPredicted RBP11.08□□□□□ -0.64
SMAD3-203ENST00000537194 PRDX5P30044 214 aa11.08□□□□□ -0.64
SMAD3-203ENST00000537194 GRK4P32298 578 aa11.08□□□□□ -0.64
SMAD3-203ENST00000537194 C17orf99Q6UX52 265 aa11.08□□□□□ -0.64
SMAD3-203ENST00000537194 HTATIP2Q9BUP3 242 aa11.08□□□□□ -0.64
SMAD3-203ENST00000537194 ARHGAP39Q9C0H5 1083 aa11.08□□□□□ -0.64
SMAD3-203ENST00000537194 ABCF2Q9UG63 623 aa11.08□□□□□ -0.64
SMAD3-203ENST00000537194 ZNF112Q9UJU3 913 aa11.08□□□□□ -0.64
SMAD3-203ENST00000537194 MYPNQ86TC9 1320 aa11.08□□□□□ -0.64
SMAD3-203ENST00000537194 SALL1Q9NSC2 1324 aa11.08□□□□□ -0.64
SMAD3-203ENST00000537194 CAPN2P17655 700 aa11.07□□□□□ -0.64
SMAD3-203ENST00000537194 RFX5P48382 616 aaPredicted RBP11.07□□□□□ -0.64
SMAD3-203ENST00000537194 SLFN5Q08AF3 891 aa11.07□□□□□ -0.64
SMAD3-203ENST00000537194 GORABQ5T7V8 394 aa11.07□□□□□ -0.64
SMAD3-203ENST00000537194 GADL1Q6ZQY3 521 aa11.07□□□□□ -0.64
SMAD3-203ENST00000537194 ATG9AQ7Z3C6 839 aa11.07□□□□□ -0.64
SMAD3-203ENST00000537194 SMCR8Q8TEV9 937 aaPredicted RBP11.07□□□□□ -0.64
SMAD3-203ENST00000537194 TRIOBPQ9H2D6 2365 aa11.07□□□□□ -0.64
SMAD3-203ENST00000537194 CENPFP49454 3210 aa11.06□□□□□ -0.64
SMAD3-203ENST00000537194 LDHCP07864 332 aa11.06□□□□□ -0.64
SMAD3-203ENST00000537194 OSBPP22059 807 aa11.06□□□□□ -0.64
SMAD3-203ENST00000537194 RGS3P49796 1198 aa11.06□□□□□ -0.64
SMAD3-203ENST00000537194 GSTO1P78417 241 aa11.06□□□□□ -0.64
SMAD3-203ENST00000537194 CAP1Q01518 475 aa11.06□□□□□ -0.64
SMAD3-203ENST00000537194 NFIAQ12857 509 aa11.06□□□□□ -0.64
SMAD3-203ENST00000537194 MVPQ14764 893 aaKnown RBP11.06□□□□□ -0.64
SMAD3-203ENST00000537194 ERICH6Q7L0X2 663 aa11.06□□□□□ -0.64
SMAD3-203ENST00000537194 SCYL3Q8IZE3 742 aa11.06□□□□□ -0.64
SMAD3-203ENST00000537194 SLAIN1Q8ND83 568 aa11.06□□□□□ -0.64
SMAD3-203ENST00000537194 NOL10Q9BSC4 688 aaKnown RBP11.06□□□□□ -0.64
SMAD3-203ENST00000537194 RNF208Q9H0X6 261 aa11.06□□□□□ -0.64
SMAD3-203ENST00000537194 NR2E3Q9Y5X4 410 aa11.06□□□□□ -0.64
SMAD3-203ENST00000537194 ZHX2Q9Y6X8 837 aa11.06□□□□□ -0.64
SMAD3-203ENST00000537194 DOCK2Q92608 1830 aa11.06□□□□□ -0.64
SMAD3-203ENST00000537194 MGAMO43451 1857 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 107.9 ms