RNA–Protein interactions for RNA: ENST00000535005.5

SCARB1-204, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best)

Gene SCARB1, Length 1,845 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-204ENST00000535005 M0R2C6 588 aa14.71□□□□□ -0.05
SCARB1-204ENST00000535005 BAG3O95817 575 aa14.71□□□□□ -0.05
SCARB1-204ENST00000535005 SCNN1DP51172 638 aa14.71□□□□□ -0.05
SCARB1-204ENST00000535005 MFAP1P55081 439 aaKnown RBP14.71□□□□□ -0.05
SCARB1-204ENST00000535005 TBC1D32Q96NH3 1257 aa14.71□□□□□ -0.05
SCARB1-204ENST00000535005 IL25Q9H293 177 aa14.71□□□□□ -0.05
SCARB1-204ENST00000535005 MAGEB6P1A0A0J9YX57 407 aa14.71□□□□□ -0.06
SCARB1-204ENST00000535005 GLTPD2A6NH11 291 aa14.71□□□□□ -0.06
SCARB1-204ENST00000535005 GPAA1O43292 621 aa14.71□□□□□ -0.06
SCARB1-204ENST00000535005 DDNO94850 711 aaPredicted RBP14.71□□□□□ -0.06
SCARB1-204ENST00000535005 AIDAQ96BJ3 306 aa14.71□□□□□ -0.06
SCARB1-204ENST00000535005 L3MBTL3Q96JM7 780 aaPredicted RBP14.71□□□□□ -0.06
SCARB1-204ENST00000535005 STRBPQ96SI9 672 aaKnown RBP14.71□□□□□ -0.06
SCARB1-204ENST00000535005 GPRC5DQ9NZD1 345 aa14.71□□□□□ -0.06
SCARB1-204ENST00000535005 CCDC171Q6TFL3 1326 aa14.7□□□□□ -0.06
SCARB1-204ENST00000535005 FSD2A1L4K1 749 aa14.7□□□□□ -0.06
SCARB1-204ENST00000535005 MBD4O95243 580 aa14.7□□□□□ -0.06
SCARB1-204ENST00000535005 CFAP100Q494V2 611 aa14.7□□□□□ -0.06
SCARB1-204ENST00000535005 APOBEC3HQ6NTF7 200 aaKnown RBP14.7□□□□□ -0.06
SCARB1-204ENST00000535005 ZNF589Q86UQ0 364 aaPredicted RBP14.7□□□□□ -0.06
SCARB1-204ENST00000535005 MIGA1Q8NAN2 632 aa14.7□□□□□ -0.06
SCARB1-204ENST00000535005 ZBED3Q96IU2 234 aaPredicted RBP14.7□□□□□ -0.06
SCARB1-204ENST00000535005 NOL10Q9BSC4 688 aaKnown RBP14.7□□□□□ -0.06
SCARB1-204ENST00000535005 CNOT7Q9UIV1 285 aaKnown RBP14.7□□□□□ -0.06
SCARB1-204ENST00000535005 MYH2Q9UKX2 1941 aa14.7□□□□□ -0.06
SCARB1-204ENST00000535005 EPB41L2O43491 1005 aaKnown RBP14.69□□□□□ -0.06
SCARB1-204ENST00000535005 PLCG2P16885 1265 aa14.69□□□□□ -0.06
SCARB1-204ENST00000535005 BTDP43251 543 aa14.69□□□□□ -0.06
SCARB1-204ENST00000535005 DYNLL1P63167 89 aaKnown RBP14.69□□□□□ -0.06
SCARB1-204ENST00000535005 RPAP1Q9BWH6 1393 aaPredicted RBP14.69□□□□□ -0.06
SCARB1-204ENST00000535005 SPDYE2BA6NHP3 402 aa14.69□□□□□ -0.06
SCARB1-204ENST00000535005 H7C1D1 291 aa14.69□□□□□ -0.06
SCARB1-204ENST00000535005 SPDYE6P0CI01 402 aa14.69□□□□□ -0.06
SCARB1-204ENST00000535005 GNAT2P19087 354 aa14.69□□□□□ -0.06
SCARB1-204ENST00000535005 RHBDL3P58872 404 aa14.69□□□□□ -0.06
SCARB1-204ENST00000535005 DLGAP5Q15398 846 aa14.69□□□□□ -0.06
SCARB1-204ENST00000535005 CCDC129Q6ZRS4 1044 aa14.69□□□□□ -0.06
SCARB1-204ENST00000535005 MICALL2Q8IY33 904 aa14.69□□□□□ -0.06
SCARB1-204ENST00000535005 LCORLQ8N3X6 602 aa14.69□□□□□ -0.06
SCARB1-204ENST00000535005 ARMT1Q9H993 441 aa14.69□□□□□ -0.06
SCARB1-204ENST00000535005 MYOZ2Q9NPC6 264 aa14.69□□□□□ -0.06
SCARB1-204ENST00000535005 AATFQ9NY61 560 aaKnown RBP eCLIP14.69□□□□□ -0.06
SCARB1-204ENST00000535005 GOLGA6L3A6NEY3 463 aa14.68□□□□□ -0.06
SCARB1-204ENST00000535005 REC8O95072 547 aa14.68□□□□□ -0.06
SCARB1-204ENST00000535005 SHTN1A0MZ66 631 aa14.67□□□□□ -0.06
SCARB1-204ENST00000535005 SEC24BO95487 1268 aa14.67□□□□□ -0.06
SCARB1-204ENST00000535005 CLCN1P35523 988 aa14.67□□□□□ -0.06
SCARB1-204ENST00000535005 RBM5P52756 815 aaKnown RBP eCLIP14.67□□□□□ -0.06
SCARB1-204ENST00000535005 CDC42EP5Q6NZY7 148 aa14.67□□□□□ -0.06
SCARB1-204ENST00000535005 KIAA1211Q6ZU35 1233 aa14.67□□□□□ -0.06
SCARB1-204ENST00000535005 PRMT6Q96LA8 375 aaPredicted RBP14.67□□□□□ -0.06
SCARB1-204ENST00000535005 DSCC1Q9BVC3 393 aa14.67□□□□□ -0.06
SCARB1-204ENST00000535005 CRNKL1Q9BZJ0 848 aaKnown RBP14.67□□□□□ -0.06
SCARB1-204ENST00000535005 LSG1Q9H089 658 aaKnown RBP14.67□□□□□ -0.06
SCARB1-204ENST00000535005 PATL2C9JE40 543 aaKnown RBP14.66□□□□□ -0.06
SCARB1-204ENST00000535005 FOXP2O15409 715 aa14.66□□□□□ -0.06
SCARB1-204ENST00000535005 SH3RF3Q8TEJ3 882 aaPredicted RBP14.66□□□□□ -0.06
SCARB1-204ENST00000535005 USP40Q9NVE5 1235 aa14.66□□□□□ -0.06
SCARB1-204ENST00000535005 PCDHAC2Q9Y5I4 1007 aa14.66□□□□□ -0.06
SCARB1-204ENST00000535005 NPM3O75607 178 aaKnown RBP14.66□□□□□ -0.06
SCARB1-204ENST00000535005 HSPD1P10809 573 aaKnown RBP14.66□□□□□ -0.06
SCARB1-204ENST00000535005 LMOD1P29536 600 aaPredicted RBP14.66□□□□□ -0.06
SCARB1-204ENST00000535005 EPS15P42566 896 aa14.66□□□□□ -0.06
SCARB1-204ENST00000535005 ALX1Q15699 326 aa14.66□□□□□ -0.06
SCARB1-204ENST00000535005 GIMAP6Q6P9H5 292 aa14.66□□□□□ -0.06
SCARB1-204ENST00000535005 MAP4K1Q92918 833 aa14.66□□□□□ -0.06
SCARB1-204ENST00000535005 ANO2Q9NQ90 1003 aa14.66□□□□□ -0.06
SCARB1-204ENST00000535005 SLC4A4Q9Y6R1 1079 aa14.66□□□□□ -0.06
SCARB1-204ENST00000535005 GSG1L2A8MUP6 293 aa14.65□□□□□ -0.06
SCARB1-204ENST00000535005 WNT10BO00744 389 aa14.65□□□□□ -0.06
SCARB1-204ENST00000535005 PTH1RQ03431 593 aa14.65□□□□□ -0.06
SCARB1-204ENST00000535005 VPS53Q5VIR6 699 aa14.65□□□□□ -0.06
SCARB1-204ENST00000535005 TEX11Q8IYF3 940 aa14.65□□□□□ -0.06
SCARB1-204ENST00000535005 IDI2Q9BXS1 227 aa14.65□□□□□ -0.06
SCARB1-204ENST00000535005 ADARB2Q9NS39 739 aaKnown RBP14.65□□□□□ -0.06
SCARB1-204ENST00000535005 ATP8A2Q9NTI2 1148 aa14.65□□□□□ -0.06
SCARB1-204ENST00000535005 ADAMTSL1Q8N6G6 1762 aa14.65□□□□□ -0.06
SCARB1-204ENST00000535005 PRKAB2O43741 272 aa14.64□□□□□ -0.07
SCARB1-204ENST00000535005 WDHD1O75717 1129 aaPredicted RBP14.64□□□□□ -0.07
SCARB1-204ENST00000535005 PTMSP20962 102 aa14.64□□□□□ -0.07
SCARB1-204ENST00000535005 MRE11P49959 708 aa14.64□□□□□ -0.07
SCARB1-204ENST00000535005 KIF4BQ2VIQ3 1234 aa14.64□□□□□ -0.07
SCARB1-204ENST00000535005 FKBP1CQ5VVH2 108 aa14.64□□□□□ -0.07
SCARB1-204ENST00000535005 SAMD7Q7Z3H4 446 aa14.64□□□□□ -0.07
SCARB1-204ENST00000535005 USP26Q9BXU7 913 aa14.64□□□□□ -0.07
SCARB1-204ENST00000535005 CHMP5Q9NZZ3 219 aa14.64□□□□□ -0.07
SCARB1-204ENST00000535005 MKRN1Q9UHC7 482 aaKnown RBP14.64□□□□□ -0.07
SCARB1-204ENST00000535005 ZMYM6O95789 1325 aa14.64□□□□□ -0.07
SCARB1-204ENST00000535005 WDR90Q96KV7 1748 aa14.64□□□□□ -0.07
SCARB1-204ENST00000535005 EGFRP00533 1210 aa14.64□□□□□ -0.07
SCARB1-204ENST00000535005 MCM4P33991 863 aa14.64□□□□□ -0.07
SCARB1-204ENST00000535005 SPDYE2Q495Y8 402 aa14.64□□□□□ -0.07
SCARB1-204ENST00000535005 TBC1D10BQ4KMP7 808 aaPredicted RBP14.64□□□□□ -0.07
SCARB1-204ENST00000535005 NACAP1Q9BZK3 213 aa14.64□□□□□ -0.07
SCARB1-204ENST00000535005 TDRD3Q9H7E2 651 aaKnown RBP14.64□□□□□ -0.07
SCARB1-204ENST00000535005 RRAGDQ9NQL2 400 aaPredicted RBP14.64□□□□□ -0.07
SCARB1-204ENST00000535005 ZNF70Q9UC06 446 aaPredicted RBP14.64□□□□□ -0.07
SCARB1-204ENST00000535005 HACL1Q9UJ83 578 aa14.64□□□□□ -0.07
SCARB1-204ENST00000535005 U3KPZ7 1027 aaPredicted RBP14.64□□□□□ -0.07
SCARB1-204ENST00000535005 IQCA1LA6NCM1 817 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms