RNA–Protein interactions for RNA: ENST00000534389.2

CSDE1-216, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 601 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-216ENST00000534389 DTWD1Q8N5C7 304 aa4.16□□□□□ -1.74
CSDE1-216ENST00000534389 C3orf58Q8NDZ4 430 aa4.16□□□□□ -1.74
CSDE1-216ENST00000534389 NACC1Q96RE7 527 aa4.16□□□□□ -1.74
CSDE1-216ENST00000534389 METTL5Q9NRN9 209 aaKnown RBP4.16□□□□□ -1.74
CSDE1-216ENST00000534389 GOLGA3Q08378 1498 aa4.16□□□□□ -1.74
CSDE1-216ENST00000534389 USP31Q70CQ4 1352 aa4.15□□□□□ -1.74
CSDE1-216ENST00000534389 RRBP1Q9P2E9 1410 aaKnown RBP4.15□□□□□ -1.74
CSDE1-216ENST00000534389 SART1O43290 800 aaKnown RBP4.15□□□□□ -1.75
CSDE1-216ENST00000534389 NID1P14543 1247 aa4.15□□□□□ -1.75
CSDE1-216ENST00000534389 NME2P22392 152 aa4.15□□□□□ -1.75
CSDE1-216ENST00000534389 MAOBP27338 520 aa4.15□□□□□ -1.75
CSDE1-216ENST00000534389 CALD1Q05682 793 aaKnown RBP4.15□□□□□ -1.75
CSDE1-216ENST00000534389 GRIK5Q16478 980 aa4.15□□□□□ -1.75
CSDE1-216ENST00000534389 ZNF423Q2M1K9 1284 aa4.15□□□□□ -1.75
CSDE1-216ENST00000534389 SNAP47Q5SQN1 464 aa4.15□□□□□ -1.75
CSDE1-216ENST00000534389 LLGL2Q6P1M3 1020 aa4.15□□□□□ -1.75
CSDE1-216ENST00000534389 FDX2Q6P4F2 183 aa4.15□□□□□ -1.75
CSDE1-216ENST00000534389 LINC00114Q6XXX2 140 aa4.15□□□□□ -1.75
CSDE1-216ENST00000534389 ACAD11Q709F0 780 aa4.15□□□□□ -1.75
CSDE1-216ENST00000534389 JARID2Q92833 1246 aaPredicted RBP4.15□□□□□ -1.75
CSDE1-216ENST00000534389 KLHDC7BQ96G42 594 aa4.15□□□□□ -1.75
CSDE1-216ENST00000534389 NECAB3Q96P71 396 aaPredicted RBP4.15□□□□□ -1.75
CSDE1-216ENST00000534389 NOC4LQ9BVI4 516 aaKnown RBP4.15□□□□□ -1.75
CSDE1-216ENST00000534389 MIR1-1HGQ9H1L0 117 aa4.15□□□□□ -1.75
CSDE1-216ENST00000534389 RAB3GAP2Q9H2M9 1393 aa4.14□□□□□ -1.75
CSDE1-216ENST00000534389 KIF21BO75037 1637 aa4.14□□□□□ -1.75
CSDE1-216ENST00000534389 SMG6Q86US8 1419 aaKnown RBP4.14□□□□□ -1.75
CSDE1-216ENST00000534389 CECR2Q9BXF3 1484 aa4.14□□□□□ -1.75
CSDE1-216ENST00000534389 FRAT2O75474 233 aaPredicted RBP4.14□□□□□ -1.75
CSDE1-216ENST00000534389 HSP90AA1P07900 732 aaKnown RBP4.14□□□□□ -1.75
CSDE1-216ENST00000534389 SLFN14P0C7P3 912 aa4.14□□□□□ -1.75
CSDE1-216ENST00000534389 SPATA31C1P0DKV0 1188 aa4.14□□□□□ -1.75
CSDE1-216ENST00000534389 ELNP15502 786 aa4.14□□□□□ -1.75
CSDE1-216ENST00000534389 GLB1P16278 677 aa4.14□□□□□ -1.75
CSDE1-216ENST00000534389 ARNTP27540 789 aa4.14□□□□□ -1.75
CSDE1-216ENST00000534389 BAG6P46379 1132 aa4.14□□□□□ -1.75
CSDE1-216ENST00000534389 LIG3P49916 1009 aa4.14□□□□□ -1.75
CSDE1-216ENST00000534389 FANCCQ00597 558 aa4.14□□□□□ -1.75
CSDE1-216ENST00000534389 FAAP100Q0VG06 881 aa4.14□□□□□ -1.75
CSDE1-216ENST00000534389 COL9A3Q14050 684 aaPredicted RBP4.14□□□□□ -1.75
CSDE1-216ENST00000534389 SETDB1Q15047 1291 aa4.14□□□□□ -1.75
CSDE1-216ENST00000534389 AKAP4Q5JQC9 854 aa4.14□□□□□ -1.75
CSDE1-216ENST00000534389 NUTM2GQ5VZR2 741 aa4.14□□□□□ -1.75
CSDE1-216ENST00000534389 NT5DC4Q86YG4 428 aa4.14□□□□□ -1.75
CSDE1-216ENST00000534389 ZNF654Q8IZM8 581 aa4.14□□□□□ -1.75
CSDE1-216ENST00000534389 FMR1NBQ8N0W7 255 aaPredicted RBP4.14□□□□□ -1.75
CSDE1-216ENST00000534389 ELMO3Q96BJ8 720 aa4.14□□□□□ -1.75
CSDE1-216ENST00000534389 TRIM11Q96F44 468 aa4.14□□□□□ -1.75
CSDE1-216ENST00000534389 NAP1L5Q96NT1 182 aaPredicted RBP4.14□□□□□ -1.75
CSDE1-216ENST00000534389 RUSC1Q9BVN2 902 aa4.14□□□□□ -1.75
CSDE1-216ENST00000534389 KRTAP9-2Q9BYQ4 174 aa4.14□□□□□ -1.75
CSDE1-216ENST00000534389 MRPL18Q9H0U6 180 aaKnown RBP4.14□□□□□ -1.75
CSDE1-216ENST00000534389 SOX17Q9H6I2 414 aaPredicted RBP4.14□□□□□ -1.75
CSDE1-216ENST00000534389 KBTBD4Q9NVX7 518 aa4.14□□□□□ -1.75
CSDE1-216ENST00000534389 PPP1R1BQ9UD71 204 aaPredicted RBP4.14□□□□□ -1.75
CSDE1-216ENST00000534389 PCDHA4Q9UN74 947 aa4.14□□□□□ -1.75
CSDE1-216ENST00000534389 INPP5FQ9Y2H2 1132 aa4.14□□□□□ -1.75
CSDE1-216ENST00000534389 CENPJQ9HC77 1338 aaPredicted RBP4.14□□□□□ -1.75
CSDE1-216ENST00000534389 SMARCA2P51531 1590 aa4.14□□□□□ -1.75
CSDE1-216ENST00000534389 MROH2BQ7Z745 1585 aa4.14□□□□□ -1.75
CSDE1-216ENST00000534389 CEP164Q9UPV0 1460 aa4.13□□□□□ -1.75
CSDE1-216ENST00000534389 ENC1O14682 589 aa4.13□□□□□ -1.75
CSDE1-216ENST00000534389 TCERG1O14776 1098 aaKnown RBP4.13□□□□□ -1.75
CSDE1-216ENST00000534389 DDX3YO15523 660 aaKnown RBP4.13□□□□□ -1.75
CSDE1-216ENST00000534389 GAS2O43903 313 aaKnown RBP4.13□□□□□ -1.75
CSDE1-216ENST00000534389 GSTP1P09211 210 aaKnown RBP4.13□□□□□ -1.75
CSDE1-216ENST00000534389 HDLBPQ00341 1268 aaKnown RBP4.13□□□□□ -1.75
CSDE1-216ENST00000534389 GRIK4Q16099 956 aa4.13□□□□□ -1.75
CSDE1-216ENST00000534389 ZNF394Q53GI3 561 aa4.13□□□□□ -1.75
CSDE1-216ENST00000534389 HGSNATQ68CP4 663 aa4.13□□□□□ -1.75
CSDE1-216ENST00000534389 IGF2-ASQ6U949 168 aa4.13□□□□□ -1.75
CSDE1-216ENST00000534389 ADAMTSL4Q6UY14 1074 aa4.13□□□□□ -1.75
CSDE1-216ENST00000534389 SKAP1Q86WV1 359 aa4.13□□□□□ -1.75
CSDE1-216ENST00000534389 FBXO11Q86XK2 927 aa4.13□□□□□ -1.75
CSDE1-216ENST00000534389 VPS37DQ86XT2 251 aa4.13□□□□□ -1.75
CSDE1-216ENST00000534389 C12orf50Q8NA57 414 aaPredicted RBP4.13□□□□□ -1.75
CSDE1-216ENST00000534389 TMEM74Q96NL1 305 aa4.13□□□□□ -1.75
CSDE1-216ENST00000534389 TRIM56Q9BRZ2 755 aaKnown RBP4.13□□□□□ -1.75
CSDE1-216ENST00000534389 CAPN10Q9HC96 672 aa4.13□□□□□ -1.75
CSDE1-216ENST00000534389 CYP4F12Q9HCS2 524 aa4.13□□□□□ -1.75
CSDE1-216ENST00000534389 SSU72Q9NP77 194 aaKnown RBP4.13□□□□□ -1.75
CSDE1-216ENST00000534389 POGKQ9P215 609 aa4.13□□□□□ -1.75
CSDE1-216ENST00000534389 CYP8B1Q9UNU6 501 aa4.13□□□□□ -1.75
CSDE1-216ENST00000534389 AP4E1Q9UPM8 1137 aa4.13□□□□□ -1.75
CSDE1-216ENST00000534389 TLR6Q9Y2C9 796 aa4.13□□□□□ -1.75
CSDE1-216ENST00000534389 PCDHGB7Q9Y5F8 929 aa4.13□□□□□ -1.75
CSDE1-216ENST00000534389 ZBED9Q6R2W3 1325 aa4.13□□□□□ -1.75
CSDE1-216ENST00000534389 C9orf172C9J069 976 aa4.12□□□□□ -1.75
CSDE1-216ENST00000534389 PAGE1O75459 146 aa4.12□□□□□ -1.75
CSDE1-216ENST00000534389 COL8A1P27658 744 aa4.12□□□□□ -1.75
CSDE1-216ENST00000534389 RXRBP28702 533 aa4.12□□□□□ -1.75
CSDE1-216ENST00000534389 MCM4P33991 863 aa4.12□□□□□ -1.75
CSDE1-216ENST00000534389 GSK3AP49840 483 aa4.12□□□□□ -1.75
CSDE1-216ENST00000534389 NRG1Q02297 640 aaPredicted RBP4.12□□□□□ -1.75
CSDE1-216ENST00000534389 FAM160A1Q05DH4 1040 aa4.12□□□□□ -1.75
CSDE1-216ENST00000534389 KCNMA1Q12791 1236 aa4.12□□□□□ -1.75
CSDE1-216ENST00000534389 KIAA0825Q8IV33 1275 aa4.12□□□□□ -1.75
CSDE1-216ENST00000534389 GALNT11Q8NCW6 608 aa4.12□□□□□ -1.75
CSDE1-216ENST00000534389 SPON2Q9BUD6 331 aa4.12□□□□□ -1.75
CSDE1-216ENST00000534389 CEP41Q9BYV8 373 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms