RNA–Protein interactions for RNA: ENST00000534216.5

ATPAF1-211, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 5

Gene ATPAF1, Length 693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-211ENST00000534216 SYNGAP1Q96PV0 1343 aa7.04□□□□□ -1.28
ATPAF1-211ENST00000534216 AOC2O75106 756 aa7.04□□□□□ -1.28
ATPAF1-211ENST00000534216 PAGE1O75459 146 aa7.04□□□□□ -1.28
ATPAF1-211ENST00000534216 AKAP4Q5JQC9 854 aa7.04□□□□□ -1.28
ATPAF1-211ENST00000534216 TMC4Q7Z404 712 aa7.04□□□□□ -1.28
ATPAF1-211ENST00000534216 C2CD4AQ8NCU7 369 aaPredicted RBP7.04□□□□□ -1.28
ATPAF1-211ENST00000534216 FAM161BQ96MY7 647 aa7.04□□□□□ -1.28
ATPAF1-211ENST00000534216 WDR18Q9BV38 432 aa7.04□□□□□ -1.28
ATPAF1-211ENST00000534216 KRT82Q9NSB4 513 aa7.04□□□□□ -1.28
ATPAF1-211ENST00000534216 STOML1Q9UBI4 398 aa7.04□□□□□ -1.28
ATPAF1-211ENST00000534216 TTF2Q9UNY4 1162 aaKnown RBP7.04□□□□□ -1.28
ATPAF1-211ENST00000534216 ZNF862O60290 1169 aa7.03□□□□□ -1.28
ATPAF1-211ENST00000534216 LIG1P18858 919 aa7.03□□□□□ -1.28
ATPAF1-211ENST00000534216 BMP6P22004 513 aa7.03□□□□□ -1.28
ATPAF1-211ENST00000534216 MFAP1P55081 439 aaKnown RBP7.03□□□□□ -1.28
ATPAF1-211ENST00000534216 ZNF252P-AS1Q0IIN9 211 aa7.03□□□□□ -1.28
ATPAF1-211ENST00000534216 SGO2Q562F6 1265 aa7.03□□□□□ -1.28
ATPAF1-211ENST00000534216 KCNB2Q92953 911 aa7.03□□□□□ -1.28
ATPAF1-211ENST00000534216 WDR89Q96FK6 387 aaPredicted RBP7.03□□□□□ -1.28
ATPAF1-211ENST00000534216 BCL2L13Q9BXK5 485 aa7.03□□□□□ -1.28
ATPAF1-211ENST00000534216 EMILIN2Q9BXX0 1053 aa7.03□□□□□ -1.28
ATPAF1-211ENST00000534216 CELA3AP09093 270 aa7.02□□□□□ -1.29
ATPAF1-211ENST00000534216 FSTP19883 344 aa7.02□□□□□ -1.29
ATPAF1-211ENST00000534216 BEND4Q6ZU67 534 aa7.02□□□□□ -1.29
ATPAF1-211ENST00000534216 SV2BQ7L1I2 683 aa7.02□□□□□ -1.29
ATPAF1-211ENST00000534216 CLEC10AQ8IUN9 316 aa7.02□□□□□ -1.29
ATPAF1-211ENST00000534216 TRIM42Q8IWZ5 723 aa7.02□□□□□ -1.29
ATPAF1-211ENST00000534216 FAM83CQ9BQN1 747 aa7.02□□□□□ -1.29
ATPAF1-211ENST00000534216 KCNF1Q9H3M0 494 aa7.02□□□□□ -1.29
ATPAF1-211ENST00000534216 C7orf69Q9H7B7 122 aa7.02□□□□□ -1.29
ATPAF1-211ENST00000534216 SAMM50Q9Y512 469 aa7.02□□□□□ -1.29
ATPAF1-211ENST00000534216 ACTL7BQ9Y614 415 aa7.02□□□□□ -1.29
ATPAF1-211ENST00000534216 HMX2A2RU54 273 aa7.01□□□□□ -1.29
ATPAF1-211ENST00000534216 CTSHP09668 335 aa7.01□□□□□ -1.29
ATPAF1-211ENST00000534216 MAP4P27816 1152 aaKnown RBP7.01□□□□□ -1.29
ATPAF1-211ENST00000534216 USP11P51784 963 aa7.01□□□□□ -1.29
ATPAF1-211ENST00000534216 HNRNPUQ00839 825 aaKnown RBP eCLIP7.01□□□□□ -1.29
ATPAF1-211ENST00000534216 KIF4BQ2VIQ3 1234 aa7.01□□□□□ -1.29
ATPAF1-211ENST00000534216 MEI1Q5TIA1 1274 aa7.01□□□□□ -1.29
ATPAF1-211ENST00000534216 RASIP1Q5U651 963 aa7.01□□□□□ -1.29
ATPAF1-211ENST00000534216 MAP1SQ66K74 1059 aaPredicted RBP7.01□□□□□ -1.29
ATPAF1-211ENST00000534216 CDPF1Q6NVV7 123 aa7.01□□□□□ -1.29
ATPAF1-211ENST00000534216 DYMQ7RTS9 669 aa7.01□□□□□ -1.29
ATPAF1-211ENST00000534216 GIPC2Q8TF65 315 aa7.01□□□□□ -1.29
ATPAF1-211ENST00000534216 CBX8Q9HC52 389 aa7.01□□□□□ -1.29
ATPAF1-211ENST00000534216 PPP1R9AQ9ULJ8 1098 aa7.01□□□□□ -1.29
ATPAF1-211ENST00000534216 AP4E1Q9UPM8 1137 aa7.01□□□□□ -1.29
ATPAF1-211ENST00000534216 SORBS3O60504 671 aa7□□□□□ -1.29
ATPAF1-211ENST00000534216 SLFN14P0C7P3 912 aa7□□□□□ -1.29
ATPAF1-211ENST00000534216 PCNX4Q63HM2 1172 aa7□□□□□ -1.29
ATPAF1-211ENST00000534216 MPRIPQ6WCQ1 1025 aa7□□□□□ -1.29
ATPAF1-211ENST00000534216 SLC51AQ86UW1 340 aa7□□□□□ -1.29
ATPAF1-211ENST00000534216 GRIN3AQ8TCU5 1115 aa7□□□□□ -1.29
ATPAF1-211ENST00000534216 FBLIM1Q8WUP2 373 aa7□□□□□ -1.29
ATPAF1-211ENST00000534216 GSX1Q9H4S2 264 aaPredicted RBP7□□□□□ -1.29
ATPAF1-211ENST00000534216 CACNA2D2Q9NY47 1150 aa7□□□□□ -1.29
ATPAF1-211ENST00000534216 PCDHGC5Q9Y5F6 944 aa7□□□□□ -1.29
ATPAF1-211ENST00000534216 TMPRSS2O15393 492 aa6.99□□□□□ -1.29
ATPAF1-211ENST00000534216 GSC2O15499 205 aa6.99□□□□□ -1.29
ATPAF1-211ENST00000534216 RXRBP28702 533 aa6.99□□□□□ -1.29
ATPAF1-211ENST00000534216 ID3Q02535 119 aa6.99□□□□□ -1.29
ATPAF1-211ENST00000534216 CCDC85BQ15834 202 aaPredicted RBP6.99□□□□□ -1.29
ATPAF1-211ENST00000534216 ZNF326Q5BKZ1 582 aaKnown RBP6.99□□□□□ -1.29
ATPAF1-211ENST00000534216 LLGL2Q6P1M3 1020 aa6.99□□□□□ -1.29
ATPAF1-211ENST00000534216 GPBAR1Q8TDU6 330 aa6.99□□□□□ -1.29
ATPAF1-211ENST00000534216 EZH1Q92800 747 aaPredicted RBP6.99□□□□□ -1.29
ATPAF1-211ENST00000534216 MRS2Q9HD23 443 aa6.99□□□□□ -1.29
ATPAF1-211ENST00000534216 FAM105AQ9NUU6 356 aa6.99□□□□□ -1.29
ATPAF1-211ENST00000534216 CRIM1Q9NZV1 1036 aa6.99□□□□□ -1.29
ATPAF1-211ENST00000534216 KRTAP4-8A0A0G2JLE6 195 aa6.98□□□□□ -1.29
ATPAF1-211ENST00000534216 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.98□□□□□ -1.29
ATPAF1-211ENST00000534216 FAM95CA0A1B0GW59 222 aa6.98□□□□□ -1.29
ATPAF1-211ENST00000534216 IGLV1-40P01703 118 aa6.98□□□□□ -1.29
ATPAF1-211ENST00000534216 ASPAP45381 313 aa6.98□□□□□ -1.29
ATPAF1-211ENST00000534216 LRRC14Q15048 493 aa6.98□□□□□ -1.29
ATPAF1-211ENST00000534216 TAF1CQ15572 869 aaPredicted RBP6.98□□□□□ -1.29
ATPAF1-211ENST00000534216 RNF43Q68DV7 783 aa6.98□□□□□ -1.29
ATPAF1-211ENST00000534216 CRELD1Q96HD1 420 aa6.98□□□□□ -1.29
ATPAF1-211ENST00000534216 YIPF2Q9BWQ6 316 aa6.98□□□□□ -1.29
ATPAF1-211ENST00000534216 ACSS3Q9H6R3 686 aa6.98□□□□□ -1.29
ATPAF1-211ENST00000534216 VTI1BQ9UEU0 232 aa6.98□□□□□ -1.29
ATPAF1-211ENST00000534216 CYP8B1Q9UNU6 501 aa6.98□□□□□ -1.29
ATPAF1-211ENST00000534216 USP31Q70CQ4 1352 aa6.97□□□□□ -1.29
ATPAF1-211ENST00000534216 TRIM37O94972 964 aa6.97□□□□□ -1.29
ATPAF1-211ENST00000534216 RAB6AP20340 208 aa6.97□□□□□ -1.29
ATPAF1-211ENST00000534216 ST13P50502 369 aaKnown RBP6.97□□□□□ -1.29
ATPAF1-211ENST00000534216 NFIAQ12857 509 aa6.97□□□□□ -1.29
ATPAF1-211ENST00000534216 SCARA3Q6AZY7 606 aa6.97□□□□□ -1.29
ATPAF1-211ENST00000534216 TTBK2Q6IQ55 1244 aa6.97□□□□□ -1.29
ATPAF1-211ENST00000534216 ACSBG1Q96GR2 724 aa6.97□□□□□ -1.29
ATPAF1-211ENST00000534216 FANCD2OSQ96PS1 177 aa6.97□□□□□ -1.29
ATPAF1-211ENST00000534216 DISC1Q9NRI5 854 aa6.97□□□□□ -1.29
ATPAF1-211ENST00000534216 NFICP08651 508 aa6.96□□□□□ -1.3
ATPAF1-211ENST00000534216 ITGAEP38570 1179 aa6.96□□□□□ -1.3
ATPAF1-211ENST00000534216 ZC3H12AQ5D1E8 599 aaKnown RBP6.96□□□□□ -1.3
ATPAF1-211ENST00000534216 ZMYM1Q5SVZ6 1142 aa6.96□□□□□ -1.3
ATPAF1-211ENST00000534216 PAOXQ6QHF9 649 aa6.96□□□□□ -1.3
ATPAF1-211ENST00000534216 DBNDD2Q9BQY9 259 aa6.96□□□□□ -1.3
ATPAF1-211ENST00000534216 NOC4LQ9BVI4 516 aaKnown RBP6.96□□□□□ -1.3
ATPAF1-211ENST00000534216 KRTAP9-9Q9BYP9 154 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms