RNA–Protein interactions for RNA: ENST00000533946.5

SSBP3-215, Transcript of single stranded DNA binding protein 3, human

TSL 3

Gene SSBP3, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SSBP3-215	ENST00000533946	ZSWIM8	A7E2V4	1837 aa		11.93	□□□□□ -0.5
SSBP3-215	ENST00000533946	LDHB	P07195	334 aa	Known RBP	11.93	□□□□□ -0.5
SSBP3-215	ENST00000533946	INPP5B	P32019	993 aa		11.93	□□□□□ -0.5
SSBP3-215	ENST00000533946	TM4SF4	P48230	202 aa		11.93	□□□□□ -0.5
SSBP3-215	ENST00000533946	MMP14	P50281	582 aa		11.93	□□□□□ -0.5
SSBP3-215	ENST00000533946	HDLBP	Q00341	1268 aa	Known RBP	11.93	□□□□□ -0.5
SSBP3-215	ENST00000533946	MECOM	Q03112	1051 aa		11.93	□□□□□ -0.5
SSBP3-215	ENST00000533946	G3BP1	Q13283	466 aa	Known RBP eCLIP	11.93	□□□□□ -0.5
SSBP3-215	ENST00000533946	VGLL4	Q14135	290 aa		11.93	□□□□□ -0.5
SSBP3-215	ENST00000533946	ADGRA1	Q86SQ6	560 aa		11.93	□□□□□ -0.5
SSBP3-215	ENST00000533946	EAF2	Q96CJ1	260 aa	Predicted RBP	11.93	□□□□□ -0.5
SSBP3-215	ENST00000533946	BCL11A	Q9H165	835 aa		11.93	□□□□□ -0.5
SSBP3-215	ENST00000533946	USP40	Q9NVE5	1235 aa		11.93	□□□□□ -0.5
SSBP3-215	ENST00000533946	DBNL	Q9UJU6	430 aa	Known RBP	11.93	□□□□□ -0.5
SSBP3-215	ENST00000533946	AK9	Q5TCS8	1911 aa		11.93	□□□□□ -0.5
SSBP3-215	ENST00000533946	APBB1	O00213	710 aa		11.92	□□□□□ -0.5
SSBP3-215	ENST00000533946	NF2	P35240	595 aa		11.92	□□□□□ -0.5
SSBP3-215	ENST00000533946	DGKZ	Q13574	1117 aa		11.92	□□□□□ -0.5
SSBP3-215	ENST00000533946	TNNI3K	Q59H18	835 aa		11.92	□□□□□ -0.5
SSBP3-215	ENST00000533946	CCDC84	Q86UT8	332 aa	Predicted RBP	11.92	□□□□□ -0.5
SSBP3-215	ENST00000533946	DDX55	Q8NHQ9	600 aa	Known RBP eCLIP	11.92	□□□□□ -0.5	5e-6	■■□□□ 11.5
SSBP3-215	ENST00000533946	MS4A4A	Q96JQ5	239 aa		11.92	□□□□□ -0.5
SSBP3-215	ENST00000533946	MRI	Q9BWK5	157 aa		11.92	□□□□□ -0.5
SSBP3-215	ENST00000533946	PIH1D3	Q9NQM4	214 aa	Known RBP	11.92	□□□□□ -0.5
SSBP3-215	ENST00000533946	RCAN3	Q9UKA8	241 aa		11.92	□□□□□ -0.5
SSBP3-215	ENST00000533946	DENND2A	Q9ULE3	1009 aa		11.92	□□□□□ -0.5
SSBP3-215	ENST00000533946	SNCAIP	Q9Y6H5	919 aa		11.92	□□□□□ -0.5
SSBP3-215	ENST00000533946	FPGT-TNNI3K	V9GXZ4	949 aa		11.92	□□□□□ -0.5
SSBP3-215	ENST00000533946	GAK	O14976	1311 aa		11.91	□□□□□ -0.5
SSBP3-215	ENST00000533946	SALL1	Q9NSC2	1324 aa		11.91	□□□□□ -0.5
SSBP3-215	ENST00000533946	DDTL	A6NHG4	134 aa	Predicted RBP	11.91	□□□□□ -0.5
SSBP3-215	ENST00000533946	FAM196B	A6NMK8	535 aa		11.91	□□□□□ -0.5
SSBP3-215	ENST00000533946	WDHD1	O75717	1129 aa	Predicted RBP	11.91	□□□□□ -0.5
SSBP3-215	ENST00000533946	ARID4A	P29374	1257 aa	Predicted RBP	11.91	□□□□□ -0.5
SSBP3-215	ENST00000533946	RGS3	P49796	1198 aa		11.91	□□□□□ -0.5
SSBP3-215	ENST00000533946	RHBDL3	P58872	404 aa		11.91	□□□□□ -0.5
SSBP3-215	ENST00000533946	RRP1B	Q14684	758 aa	Known RBP	11.91	□□□□□ -0.5
SSBP3-215	ENST00000533946	SUPT20HL1	Q3ZLR7	823 aa		11.91	□□□□□ -0.5
SSBP3-215	ENST00000533946	SPATA5	Q8NB90	893 aa		11.91	□□□□□ -0.5
SSBP3-215	ENST00000533946	ZNF296	Q8WUU4	475 aa	Predicted RBP	11.91	□□□□□ -0.5
SSBP3-215	ENST00000533946	BRI3BP	Q8WY22	251 aa		11.91	□□□□□ -0.5
SSBP3-215	ENST00000533946	OPTN	Q96CV9	577 aa		11.91	□□□□□ -0.5
SSBP3-215	ENST00000533946	IL1RAPL2	Q9NP60	686 aa		11.91	□□□□□ -0.5
SSBP3-215	ENST00000533946	NOP58	Q9Y2X3	529 aa	Known RBP	11.91	□□□□□ -0.5
SSBP3-215	ENST00000533946	PPP2R3B	Q9Y5P8	575 aa		11.91	□□□□□ -0.5
SSBP3-215	ENST00000533946	LAMB1	P07942	1786 aa		11.91	□□□□□ -0.5
SSBP3-215	ENST00000533946	RFX7	Q2KHR2	1363 aa		11.91	□□□□□ -0.5
SSBP3-215	ENST00000533946	ATRNL1	Q5VV63	1379 aa		11.91	□□□□□ -0.5
SSBP3-215	ENST00000533946	PPP1R12B	O60237	982 aa	Predicted RBP	11.9	□□□□□ -0.5
SSBP3-215	ENST00000533946	CHGB	P05060	677 aa		11.9	□□□□□ -0.5
SSBP3-215	ENST00000533946	CYP2E1	P05181	493 aa	Predicted RBP	11.9	□□□□□ -0.5
SSBP3-215	ENST00000533946	SHROOM1	Q2M3G4	852 aa	Predicted RBP	11.9	□□□□□ -0.5
SSBP3-215	ENST00000533946	SLFNL1	Q499Z3	407 aa		11.9	□□□□□ -0.5
SSBP3-215	ENST00000533946	IFNL1	Q8IU54	200 aa		11.9	□□□□□ -0.5
SSBP3-215	ENST00000533946	NSUN4	Q96CB9	384 aa	Known RBP	11.9	□□□□□ -0.5
SSBP3-215	ENST00000533946	CDK5RAP2	Q96SN8	1893 aa		11.9	□□□□□ -0.5
SSBP3-215	ENST00000533946	ANTXR1	Q9H6X2	564 aa		11.9	□□□□□ -0.5
SSBP3-215	ENST00000533946	ZBTB40	Q9NUA8	1239 aa		11.9	□□□□□ -0.5
SSBP3-215	ENST00000533946	GNL3L	Q9NVN8	582 aa	Known RBP	11.9	□□□□□ -0.5
SSBP3-215	ENST00000533946	SUGT1	Q9Y2Z0	365 aa		11.9	□□□□□ -0.5
SSBP3-215	ENST00000533946	SIPA1L1	O43166	1804 aa		11.89	□□□□□ -0.51
SSBP3-215	ENST00000533946	CCDC85C	A6NKD9	419 aa		11.89	□□□□□ -0.51
SSBP3-215	ENST00000533946	ECM2	O94769	699 aa	Predicted RBP	11.89	□□□□□ -0.51
SSBP3-215	ENST00000533946	BTD	P43251	543 aa		11.89	□□□□□ -0.51
SSBP3-215	ENST00000533946	ZAP70	P43403	619 aa		11.89	□□□□□ -0.51
SSBP3-215	ENST00000533946	IREB2	P48200	963 aa	Known RBP	11.89	□□□□□ -0.51
SSBP3-215	ENST00000533946	MAP3K9	P80192	1104 aa		11.89	□□□□□ -0.51
SSBP3-215	ENST00000533946	OS9	Q13438	667 aa	Predicted RBP	11.89	□□□□□ -0.51
SSBP3-215	ENST00000533946	MVP	Q14764	893 aa	Known RBP	11.89	□□□□□ -0.51
SSBP3-215	ENST00000533946	ANKRD13A	Q8IZ07	590 aa		11.89	□□□□□ -0.51
SSBP3-215	ENST00000533946	FAM43A	Q8N2R8	423 aa		11.89	□□□□□ -0.51
SSBP3-215	ENST00000533946	OTUD5	Q96G74	571 aa		11.89	□□□□□ -0.51
SSBP3-215	ENST00000533946	WRNIP1	Q96S55	665 aa		11.89	□□□□□ -0.51
SSBP3-215	ENST00000533946	SAGE1	Q9NXZ1	904 aa		11.89	□□□□□ -0.51
SSBP3-215	ENST00000533946	AKAP2	Q9Y2D5	859 aa		11.89	□□□□□ -0.51
SSBP3-215	ENST00000533946	PHF20L1	A8MW92	1017 aa		11.88	□□□□□ -0.51
SSBP3-215	ENST00000533946	GPR25	O00155	361 aa		11.88	□□□□□ -0.51
SSBP3-215	ENST00000533946	SEMA3E	O15041	775 aa		11.88	□□□□□ -0.51
SSBP3-215	ENST00000533946	CA12	O43570	354 aa		11.88	□□□□□ -0.51
SSBP3-215	ENST00000533946	DYNLL1	P63167	89 aa	Known RBP	11.88	□□□□□ -0.51
SSBP3-215	ENST00000533946	JAG1	P78504	1218 aa		11.88	□□□□□ -0.51
SSBP3-215	ENST00000533946	EVX2	Q03828	476 aa		11.88	□□□□□ -0.51
SSBP3-215	ENST00000533946	CRHR2	Q13324	411 aa		11.88	□□□□□ -0.51
SSBP3-215	ENST00000533946	PICALM	Q13492	652 aa		11.88	□□□□□ -0.51
SSBP3-215	ENST00000533946	TNFAIP1	Q13829	316 aa		11.88	□□□□□ -0.51
SSBP3-215	ENST00000533946	GORAB	Q5T7V8	394 aa		11.88	□□□□□ -0.51
SSBP3-215	ENST00000533946	FAM83A	Q86UY5	434 aa		11.88	□□□□□ -0.51
SSBP3-215	ENST00000533946	DZIP1	Q86YF9	867 aa	Known RBP	11.88	□□□□□ -0.51
SSBP3-215	ENST00000533946	SH3RF3	Q8TEJ3	882 aa	Predicted RBP	11.88	□□□□□ -0.51
SSBP3-215	ENST00000533946	FAM151A	Q8WW52	585 aa		11.88	□□□□□ -0.51
SSBP3-215	ENST00000533946	EDC3	Q96F86	508 aa	Known RBP	11.88	□□□□□ -0.51
SSBP3-215	ENST00000533946	YTHDC1	Q96MU7	727 aa	Known RBP	11.88	□□□□□ -0.51
SSBP3-215	ENST00000533946	HDAC5	Q9UQL6	1122 aa		11.88	□□□□□ -0.51
SSBP3-215	ENST00000533946	MROH7-TTC4	A0A0A0MT08	1334 aa		11.87	□□□□□ -0.51
SSBP3-215	ENST00000533946	GPR75-ASB3	A0A0A6YYF3	556 aa		11.87	□□□□□ -0.51
SSBP3-215	ENST00000533946	IRF6	O14896	467 aa		11.87	□□□□□ -0.51
SSBP3-215	ENST00000533946	SMARCA5	O60264	1052 aa	Predicted RBP	11.87	□□□□□ -0.51
SSBP3-215	ENST00000533946	MOGS	Q13724	837 aa		11.87	□□□□□ -0.51
SSBP3-215	ENST00000533946	SLC4A8	Q2Y0W8	1093 aa		11.87	□□□□□ -0.51
SSBP3-215	ENST00000533946	FKBP1C	Q5VVH2	108 aa		11.87	□□□□□ -0.51

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