RNA–Protein interactions for RNA: ENST00000533096.5

COPB1-209, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-209ENST00000533096 ANKRD23Q86SG2 305 aa16.36■□□□□ 0.21
COPB1-209ENST00000533096 FAM9BQ8IZU0 186 aa16.36■□□□□ 0.21
COPB1-209ENST00000533096 RNF208Q9H0X6 261 aa16.36■□□□□ 0.21
COPB1-209ENST00000533096 ZCCHC17Q9NP64 241 aaKnown RBP16.36■□□□□ 0.21
COPB1-209ENST00000533096 USP40Q9NVE5 1235 aa16.36■□□□□ 0.21
COPB1-209ENST00000533096 CCL5P13501 91 aa16.35■□□□□ 0.21
COPB1-209ENST00000533096 FKBP1CQ5VVH2 108 aa16.35■□□□□ 0.21
COPB1-209ENST00000533096 CDC42EP5Q6NZY7 148 aa16.35■□□□□ 0.21
COPB1-209ENST00000533096 ANKRD44Q8N8A2 993 aa16.35■□□□□ 0.21
COPB1-209ENST00000533096 FAM151AQ8WW52 585 aa16.35■□□□□ 0.21
COPB1-209ENST00000533096 RBM27Q9P2N5 1060 aaKnown RBP16.35■□□□□ 0.21
COPB1-209ENST00000533096 CYP2C8P10632 490 aa16.34■□□□□ 0.21
COPB1-209ENST00000533096 DIXDC1Q155Q3 683 aa16.34■□□□□ 0.21
COPB1-209ENST00000533096 ZFPM1Q8IX07 1006 aa16.34■□□□□ 0.21
COPB1-209ENST00000533096 MYPNQ86TC9 1320 aa16.34■□□□□ 0.21
COPB1-209ENST00000533096 NFIAQ12857 509 aa16.33■□□□□ 0.2
COPB1-209ENST00000533096 PUM3Q15397 648 aaKnown RBP16.33■□□□□ 0.2
COPB1-209ENST00000533096 VGLL2Q8N8G2 317 aa16.33■□□□□ 0.2
COPB1-209ENST00000533096 NKX2-3Q8TAU0 364 aa16.33■□□□□ 0.2
COPB1-209ENST00000533096 WDR66Q8TBY9 1149 aa16.33■□□□□ 0.2
COPB1-209ENST00000533096 SHISA4Q96DD7 197 aa16.33■□□□□ 0.2
COPB1-209ENST00000533096 TAOK2Q9UL54 1235 aa16.33■□□□□ 0.2
COPB1-209ENST00000533096 SUGT1Q9Y2Z0 365 aa16.33■□□□□ 0.2
COPB1-209ENST00000533096 MAST3O60307 1309 aa16.33■□□□□ 0.2
COPB1-209ENST00000533096 MYH3P11055 1940 aa16.33■□□□□ 0.2
COPB1-209ENST00000533096 ANP32CO43423 234 aa16.32■□□□□ 0.2
COPB1-209ENST00000533096 GJB1P08034 283 aa16.32■□□□□ 0.2
COPB1-209ENST00000533096 SLC5A1P13866 664 aa16.32■□□□□ 0.2
COPB1-209ENST00000533096 UBXN2AP68543 259 aa16.32■□□□□ 0.2
COPB1-209ENST00000533096 PRKCZQ05513 592 aa16.32■□□□□ 0.2
COPB1-209ENST00000533096 RABL6Q3YEC7 729 aaPredicted RBP16.32■□□□□ 0.2
COPB1-209ENST00000533096 HTATIP2Q9BUP3 242 aa16.32■□□□□ 0.2
COPB1-209ENST00000533096 GABRQQ9UN88 632 aa16.32■□□□□ 0.2
COPB1-209ENST00000533096 DAGLAQ9Y4D2 1042 aa16.32■□□□□ 0.2
COPB1-209ENST00000533096 ZHX2Q9Y6X8 837 aa16.32■□□□□ 0.2
COPB1-209ENST00000533096 UTYO14607 1347 aa16.31■□□□□ 0.2
COPB1-209ENST00000533096 TFRCP02786 760 aaKnown RBP16.31■□□□□ 0.2
COPB1-209ENST00000533096 GJA8P48165 433 aa16.31■□□□□ 0.2
COPB1-209ENST00000533096 FCGRTP55899 365 aa16.31■□□□□ 0.2
COPB1-209ENST00000533096 GPAT2Q6NUI2 795 aa16.31■□□□□ 0.2
COPB1-209ENST00000533096 GADL1Q6ZQY3 521 aa16.31■□□□□ 0.2
COPB1-209ENST00000533096 ZSCAN29Q8IWY8 852 aaPredicted RBP16.31■□□□□ 0.2
COPB1-209ENST00000533096 MRPL50Q8N5N7 158 aaKnown RBP16.31■□□□□ 0.2
COPB1-209ENST00000533096 LPIN2Q92539 896 aa16.31■□□□□ 0.2
COPB1-209ENST00000533096 USP44Q9H0E7 712 aa16.31■□□□□ 0.2
COPB1-209ENST00000533096 SIL1Q9H173 461 aa16.31■□□□□ 0.2
COPB1-209ENST00000533096 UNC93B1Q9H1C4 597 aa16.31■□□□□ 0.2
COPB1-209ENST00000533096 ZNF112Q9UJU3 913 aa16.31■□□□□ 0.2
COPB1-209ENST00000533096 NR2E3Q9Y5X4 410 aa16.31■□□□□ 0.2
COPB1-209ENST00000533096 EYA2O00167 538 aa16.3■□□□□ 0.2
COPB1-209ENST00000533096 LDHBP07195 334 aaKnown RBP16.3■□□□□ 0.2
COPB1-209ENST00000533096 FGFR2P21802 821 aa16.3■□□□□ 0.2
COPB1-209ENST00000533096 PRDX5P30044 214 aa16.3■□□□□ 0.2
COPB1-209ENST00000533096 MOGSQ13724 837 aa16.3■□□□□ 0.2
COPB1-209ENST00000533096 U2AF1L4Q8WU68 220 aaKnown RBP16.3■□□□□ 0.2
COPB1-209ENST00000533096 PARK7Q99497 189 aaKnown RBP16.3■□□□□ 0.2
COPB1-209ENST00000533096 PICK1Q9NRD5 415 aa16.3■□□□□ 0.2
COPB1-209ENST00000533096 FAM198AQ9UFP1 575 aa16.3■□□□□ 0.2
COPB1-209ENST00000533096 KCNH4Q9UQ05 1017 aa16.3■□□□□ 0.2
COPB1-209ENST00000533096 ADCY3O60266 1144 aa16.29■□□□□ 0.2
COPB1-209ENST00000533096 SLURP2P0DP57 97 aa16.29■□□□□ 0.2
COPB1-209ENST00000533096 ELNP15502 786 aa16.29■□□□□ 0.2
COPB1-209ENST00000533096 GNL3LQ9NVN8 582 aaKnown RBP16.29■□□□□ 0.2
COPB1-209ENST00000533096 CXCL11O14625 94 aa16.28■□□□□ 0.2
COPB1-209ENST00000533096 FARP2O94887 1054 aaPredicted RBP16.28■□□□□ 0.2
COPB1-209ENST00000533096 FASTKD5Q7L8L6 764 aaKnown RBP16.28■□□□□ 0.2
COPB1-209ENST00000533096 LRRFIP2Q9Y608 721 aaKnown RBP16.28■□□□□ 0.2
COPB1-209ENST00000533096 EVI5O60447 810 aa16.27■□□□□ 0.2
COPB1-209ENST00000533096 SGPL1O95470 568 aa16.27■□□□□ 0.2
COPB1-209ENST00000533096 BCRP11274 1271 aa16.27■□□□□ 0.2
COPB1-209ENST00000533096 FLT3LGP49771 235 aa16.27■□□□□ 0.2
COPB1-209ENST00000533096 SLC17A8Q8NDX2 589 aa16.27■□□□□ 0.2
COPB1-209ENST00000533096 DEFB118Q96PH6 123 aa16.27■□□□□ 0.2
COPB1-209ENST00000533096 CEP126Q9P2H0 1117 aa16.27■□□□□ 0.2
COPB1-209ENST00000533096 KIAA0100Q14667 2235 aaKnown RBP16.27■□□□□ 0.19
COPB1-209ENST00000533096 TRIM75PA6NK02 468 aa16.26■□□□□ 0.19
COPB1-209ENST00000533096 TNPO2O14787 897 aaKnown RBP16.26■□□□□ 0.19
COPB1-209ENST00000533096 PTPRAP18433 802 aa16.26■□□□□ 0.19
COPB1-209ENST00000533096 RFX5P48382 616 aaPredicted RBP16.26■□□□□ 0.19
COPB1-209ENST00000533096 RGS3P49796 1198 aa16.26■□□□□ 0.19
COPB1-209ENST00000533096 ATP2B3Q16720 1220 aa16.26■□□□□ 0.19
COPB1-209ENST00000533096 NOL9Q5SY16 702 aaKnown RBP16.26■□□□□ 0.19
COPB1-209ENST00000533096 ATG9AQ7Z3C6 839 aa16.26■□□□□ 0.19
COPB1-209ENST00000533096 SLAIN1Q8ND83 568 aa16.26■□□□□ 0.19
COPB1-209ENST00000533096 SMCR8Q8TEV9 937 aaPredicted RBP16.26■□□□□ 0.19
COPB1-209ENST00000533096 STAP2Q9UGK3 403 aa16.26■□□□□ 0.19
COPB1-209ENST00000533096 HTTP42858 3142 aa16.26■□□□□ 0.19
COPB1-209ENST00000533096 ADGRA2Q96PE1 1338 aa16.25■□□□□ 0.19
COPB1-209ENST00000533096 PHF20L1A8MW92 1017 aa16.25■□□□□ 0.19
COPB1-209ENST00000533096 ZBTB7BO15156 539 aaPredicted RBP16.25■□□□□ 0.19
COPB1-209ENST00000533096 PICALMQ13492 652 aa16.25■□□□□ 0.19
COPB1-209ENST00000533096 CCDC84Q86UT8 332 aaPredicted RBP16.25■□□□□ 0.19
COPB1-209ENST00000533096 SCYL3Q8IZE3 742 aa16.25■□□□□ 0.19
COPB1-209ENST00000533096 SSH1Q8WYL5 1049 aa16.25■□□□□ 0.19
COPB1-209ENST00000533096 ABCF2Q9UG63 623 aa16.25■□□□□ 0.19
COPB1-209ENST00000533096 MKI67P46013 3256 aaKnown RBP16.25■□□□□ 0.19
COPB1-209ENST00000533096 INHAP05111 366 aa16.24■□□□□ 0.19
COPB1-209ENST00000533096 PHKA1P46020 1223 aa16.24■□□□□ 0.19
COPB1-209ENST00000533096 UBE2Q1Q7Z7E8 422 aa16.24■□□□□ 0.19
COPB1-209ENST00000533096 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms