RNA–Protein interactions for RNA: ENST00000532375.5

TSPAN4-220, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 518 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-220ENST00000532375 RFX7Q2KHR2 1363 aa17.03■□□□□ 0.32
TSPAN4-220ENST00000532375 IGSF3O75054 1194 aa17.03■□□□□ 0.32
TSPAN4-220ENST00000532375 HUNKP57058 714 aa17.03■□□□□ 0.32
TSPAN4-220ENST00000532375 FKBP1BP68106 108 aa17.03■□□□□ 0.32
TSPAN4-220ENST00000532375 IRX6P78412 446 aaPredicted RBP17.03■□□□□ 0.32
TSPAN4-220ENST00000532375 ADGRA1Q86SQ6 560 aa17.03■□□□□ 0.32
TSPAN4-220ENST00000532375 FAM83AQ86UY5 434 aa17.03■□□□□ 0.32
TSPAN4-220ENST00000532375 TMEM39BQ9GZU3 492 aa17.03■□□□□ 0.32
TSPAN4-220ENST00000532375 USP40Q9NVE5 1235 aa17.03■□□□□ 0.32
TSPAN4-220ENST00000532375 RAI14Q9P0K7 980 aa17.03■□□□□ 0.32
TSPAN4-220ENST00000532375 LRP2BPQ9P2M1 347 aa17.03■□□□□ 0.32
TSPAN4-220ENST00000532375 FAM198AQ9UFP1 575 aa17.03■□□□□ 0.32
TSPAN4-220ENST00000532375 FZD1Q9UP38 647 aa17.03■□□□□ 0.32
TSPAN4-220ENST00000532375 WDHD1O75717 1129 aaPredicted RBP17.02■□□□□ 0.32
TSPAN4-220ENST00000532375 TNFAIP1Q13829 316 aa17.02■□□□□ 0.32
TSPAN4-220ENST00000532375 LDLRAD1Q5T700 205 aa17.02■□□□□ 0.32
TSPAN4-220ENST00000532375 CYP4F22Q6NT55 531 aa17.02■□□□□ 0.32
TSPAN4-220ENST00000532375 ZFPM1Q8IX07 1006 aa17.02■□□□□ 0.32
TSPAN4-220ENST00000532375 SMC5Q8IY18 1101 aa17.02■□□□□ 0.32
TSPAN4-220ENST00000532375 IDI2Q9BXS1 227 aa17.02■□□□□ 0.32
TSPAN4-220ENST00000532375 MAST2Q6P0Q8 1798 aa17.02■□□□□ 0.31
TSPAN4-220ENST00000532375 SALL3Q9BXA9 1300 aa17.01■□□□□ 0.31
TSPAN4-220ENST00000532375 WDR33Q9C0J8 1336 aaKnown RBP17.01■□□□□ 0.31
TSPAN4-220ENST00000532375 FAM155AB1AL88 458 aaPredicted RBP17.01■□□□□ 0.31
TSPAN4-220ENST00000532375 UBE2Q2LH0YL09 131 aa17.01■□□□□ 0.31
TSPAN4-220ENST00000532375 USP2O75604 605 aaPredicted RBP17.01■□□□□ 0.31
TSPAN4-220ENST00000532375 BTDP43251 543 aa17.01■□□□□ 0.31
TSPAN4-220ENST00000532375 PPP4CP60510 307 aa17.01■□□□□ 0.31
TSPAN4-220ENST00000532375 MAP3K11Q16584 847 aa17.01■□□□□ 0.31
TSPAN4-220ENST00000532375 SLF2Q8IX21 1173 aa17.01■□□□□ 0.31
TSPAN4-220ENST00000532375 OTUD7AQ8TE49 926 aaPredicted RBP17.01■□□□□ 0.31
TSPAN4-220ENST00000532375 EDC3Q96F86 508 aaKnown RBP17.01■□□□□ 0.31
TSPAN4-220ENST00000532375 CAPNS2Q96L46 248 aa17.01■□□□□ 0.31
TSPAN4-220ENST00000532375 HAUS7Q99871 368 aa17.01■□□□□ 0.31
TSPAN4-220ENST00000532375 BCL11AQ9H165 835 aa17.01■□□□□ 0.31
TSPAN4-220ENST00000532375 BOLA2Q9H3K6 86 aa17.01■□□□□ 0.31
TSPAN4-220ENST00000532375 LDHCP07864 332 aa17■□□□□ 0.31
TSPAN4-220ENST00000532375 GSTO1P78417 241 aa17■□□□□ 0.31
TSPAN4-220ENST00000532375 SUPT20HL1Q3ZLR7 823 aa17■□□□□ 0.31
TSPAN4-220ENST00000532375 FAM151AQ8WW52 585 aa17■□□□□ 0.31
TSPAN4-220ENST00000532375 GCC1Q96CN9 775 aa17■□□□□ 0.31
TSPAN4-220ENST00000532375 DDX4Q9NQI0 724 aaKnown RBP17■□□□□ 0.31
TSPAN4-220ENST00000532375 THSD7BQ9C0I4 1608 aa16.99■□□□□ 0.31
TSPAN4-220ENST00000532375 CDK5RAP2Q96SN8 1893 aa16.99■□□□□ 0.31
TSPAN4-220ENST00000532375 TNNI2P48788 182 aa16.99■□□□□ 0.31
TSPAN4-220ENST00000532375 NAA16Q6N069 864 aaPredicted RBP16.99■□□□□ 0.31
TSPAN4-220ENST00000532375 RGMBQ6NW40 437 aa16.99■□□□□ 0.31
TSPAN4-220ENST00000532375 ZIC5Q96T25 663 aa16.99■□□□□ 0.31
TSPAN4-220ENST00000532375 ECHDC1Q9NTX5 307 aa16.99■□□□□ 0.31
TSPAN4-220ENST00000532375 TMOD2Q9NZR1 351 aa16.99■□□□□ 0.31
TSPAN4-220ENST00000532375 RPAP1Q9BWH6 1393 aaPredicted RBP16.99■□□□□ 0.31
TSPAN4-220ENST00000532375 GOLIM4O00461 696 aa16.98■□□□□ 0.31
TSPAN4-220ENST00000532375 NPM3O75607 178 aaKnown RBP16.98■□□□□ 0.31
TSPAN4-220ENST00000532375 IDH1O75874 414 aaKnown RBP16.98■□□□□ 0.31
TSPAN4-220ENST00000532375 PRKG1Q13976 671 aa16.98■□□□□ 0.31
TSPAN4-220ENST00000532375 SH3BP5LQ7L8J4 393 aa16.98■□□□□ 0.31
TSPAN4-220ENST00000532375 RWDD1Q9H446 243 aaPredicted RBP16.98■□□□□ 0.31
TSPAN4-220ENST00000532375 TCRBV5S4A2TA0A5A2 114 aa16.97■□□□□ 0.31
TSPAN4-220ENST00000532375 AOC2O75106 756 aa16.97■□□□□ 0.31
TSPAN4-220ENST00000532375 ENTPD3O75355 529 aa16.97■□□□□ 0.31
TSPAN4-220ENST00000532375 MAP4K4O95819 1239 aaPredicted RBP16.97■□□□□ 0.31
TSPAN4-220ENST00000532375 NF2P35240 595 aa16.97■□□□□ 0.31
TSPAN4-220ENST00000532375 ECE1P42892 770 aa16.97■□□□□ 0.31
TSPAN4-220ENST00000532375 RGS3P49796 1198 aa16.97■□□□□ 0.31
TSPAN4-220ENST00000532375 TCP10Q12799 353 aa16.97■□□□□ 0.31
TSPAN4-220ENST00000532375 ANKRD45Q5TZF3 282 aa16.97■□□□□ 0.31
TSPAN4-220ENST00000532375 TSHZ3Q63HK5 1081 aa16.97■□□□□ 0.31
TSPAN4-220ENST00000532375 PI4K2BQ8TCG2 481 aa16.97■□□□□ 0.31
TSPAN4-220ENST00000532375 DNAJC2Q99543 621 aaKnown RBP16.97■□□□□ 0.31
TSPAN4-220ENST00000532375 ANGEL1Q9UNK9 670 aaKnown RBP16.97■□□□□ 0.31
TSPAN4-220ENST00000532375 AK9Q5TCS8 1911 aa16.96■□□□□ 0.31
TSPAN4-220ENST00000532375 SLC10A3P09131 477 aa16.96■□□□□ 0.31
TSPAN4-220ENST00000532375 CYP7A1P22680 504 aa16.96■□□□□ 0.31
TSPAN4-220ENST00000532375 TTF1Q15361 905 aaPredicted RBP16.96■□□□□ 0.31
TSPAN4-220ENST00000532375 ARMC9Q7Z3E5 817 aa16.96■□□□□ 0.31
TSPAN4-220ENST00000532375 MAGEB6Q8N7X4 407 aa16.96■□□□□ 0.31
TSPAN4-220ENST00000532375 SH3RF3Q8TEJ3 882 aaPredicted RBP16.96■□□□□ 0.31
TSPAN4-220ENST00000532375 PAG1Q9NWQ8 432 aa16.96■□□□□ 0.31
TSPAN4-220ENST00000532375 AATFQ9NY61 560 aaKnown RBP eCLIP16.96■□□□□ 0.31
TSPAN4-220ENST00000532375 ATRNL1Q5VV63 1379 aa16.96■□□□□ 0.31
TSPAN4-220ENST00000532375 OTOFQ9HC10 1997 aa16.96■□□□□ 0.31
TSPAN4-220ENST00000532375 FOCADQ5VW36 1801 aa16.96■□□□□ 0.3
TSPAN4-220ENST00000532375 DDTLA6NHG4 134 aaPredicted RBP16.95■□□□□ 0.3
TSPAN4-220ENST00000532375 PPP1R12BO60237 982 aaPredicted RBP16.95■□□□□ 0.3
TSPAN4-220ENST00000532375 CHGBP05060 677 aa16.95■□□□□ 0.3
TSPAN4-220ENST00000532375 PDE6AP16499 860 aa16.95■□□□□ 0.3
TSPAN4-220ENST00000532375 MAP2K2P36507 400 aa16.95■□□□□ 0.3
TSPAN4-220ENST00000532375 ZNF157P51786 506 aaPredicted RBP16.95■□□□□ 0.3
TSPAN4-220ENST00000532375 DYNLL1P63167 89 aaKnown RBP16.95■□□□□ 0.3
TSPAN4-220ENST00000532375 MAP3K10Q02779 954 aa16.95■□□□□ 0.3
TSPAN4-220ENST00000532375 MAP3K12Q12852 859 aa16.95■□□□□ 0.3
TSPAN4-220ENST00000532375 TMED8Q6PL24 325 aaPredicted RBP16.95■□□□□ 0.3
TSPAN4-220ENST00000532375 RASAL3Q86YV0 1011 aa16.95■□□□□ 0.3
TSPAN4-220ENST00000532375 CLMNQ96JQ2 1002 aa16.95■□□□□ 0.3
TSPAN4-220ENST00000532375 MYH7P12883 1935 aa16.95■□□□□ 0.3
TSPAN4-220ENST00000532375 TTC41PQ6P2S7 1318 aa16.95■□□□□ 0.3
TSPAN4-220ENST00000532375 UNCXA6NJT0 531 aa16.94■□□□□ 0.3
TSPAN4-220ENST00000532375 SLURP2P0DP57 97 aa16.94■□□□□ 0.3
TSPAN4-220ENST00000532375 TTLL12Q14166 644 aaPredicted RBP16.94■□□□□ 0.3
TSPAN4-220ENST00000532375 SLFNL1Q499Z3 407 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms