RNA–Protein interactions for RNA: ENST00000531430.5

NEDD8-206, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-206ENST00000531430 UBXN2AP68543 259 aa11.61□□□□□ -0.55
NEDD8-206ENST00000531430 PPATQ06203 517 aa11.61□□□□□ -0.55
NEDD8-206ENST00000531430 APOBEC3HQ6NTF7 200 aaKnown RBP11.61□□□□□ -0.55
NEDD8-206ENST00000531430 FAM83AQ86UY5 434 aa11.61□□□□□ -0.55
NEDD8-206ENST00000531430 NKX2-3Q8TAU0 364 aa11.61□□□□□ -0.55
NEDD8-206ENST00000531430 KLHDC4Q8TBB5 520 aa11.61□□□□□ -0.55
NEDD8-206ENST00000531430 ZDHHC15Q96MV8 337 aa11.61□□□□□ -0.55
NEDD8-206ENST00000531430 BICC1Q9H694 974 aaKnown RBP11.61□□□□□ -0.55
NEDD8-206ENST00000531430 MRS2Q9HD23 443 aa11.61□□□□□ -0.55
NEDD8-206ENST00000531430 ZCCHC17Q9NP64 241 aaKnown RBP11.61□□□□□ -0.55
NEDD8-206ENST00000531430 NR2E3Q9Y5X4 410 aa11.61□□□□□ -0.55
NEDD8-206ENST00000531430 MYPNQ86TC9 1320 aa11.6□□□□□ -0.55
NEDD8-206ENST00000531430 AK9Q5TCS8 1911 aa11.6□□□□□ -0.55
NEDD8-206ENST00000531430 PDE8BO95263 885 aa11.6□□□□□ -0.55
NEDD8-206ENST00000531430 TFRCP02786 760 aaKnown RBP11.6□□□□□ -0.55
NEDD8-206ENST00000531430 IFIT1P09914 478 aaKnown RBP11.6□□□□□ -0.55
NEDD8-206ENST00000531430 ANKRD23Q86SG2 305 aa11.6□□□□□ -0.55
NEDD8-206ENST00000531430 SLC17A8Q8NDX2 589 aa11.6□□□□□ -0.55
NEDD8-206ENST00000531430 KAZALD1Q96I82 304 aa11.6□□□□□ -0.55
NEDD8-206ENST00000531430 USP40Q9NVE5 1235 aa11.6□□□□□ -0.55
NEDD8-206ENST00000531430 RBBP6Q7Z6E9 1792 aaKnown RBP11.59□□□□□ -0.55
NEDD8-206ENST00000531430 CYP2C8P10632 490 aa11.59□□□□□ -0.55
NEDD8-206ENST00000531430 FCGRTP55899 365 aa11.59□□□□□ -0.55
NEDD8-206ENST00000531430 GADL1Q6ZQY3 521 aa11.59□□□□□ -0.55
NEDD8-206ENST00000531430 FAM151AQ8WW52 585 aa11.59□□□□□ -0.55
NEDD8-206ENST00000531430 MRIQ9BWK5 157 aa11.59□□□□□ -0.55
NEDD8-206ENST00000531430 OTOFQ9HC10 1997 aa11.59□□□□□ -0.55
NEDD8-206ENST00000531430 MAST3O60307 1309 aa11.59□□□□□ -0.55
NEDD8-206ENST00000531430 ZSWIM8A7E2V4 1837 aa11.58□□□□□ -0.56
NEDD8-206ENST00000531430 BRCA2P51587 3418 aa11.58□□□□□ -0.56
NEDD8-206ENST00000531430 DLL1O00548 723 aa11.58□□□□□ -0.56
NEDD8-206ENST00000531430 GJB1P08034 283 aa11.58□□□□□ -0.56
NEDD8-206ENST00000531430 GJA8P48165 433 aa11.58□□□□□ -0.56
NEDD8-206ENST00000531430 PRKCZQ05513 592 aa11.58□□□□□ -0.56
NEDD8-206ENST00000531430 DIXDC1Q155Q3 683 aa11.58□□□□□ -0.56
NEDD8-206ENST00000531430 FKBP1CQ5VVH2 108 aa11.58□□□□□ -0.56
NEDD8-206ENST00000531430 CDC42EP5Q6NZY7 148 aa11.58□□□□□ -0.56
NEDD8-206ENST00000531430 HHIPL2Q6UWX4 724 aa11.58□□□□□ -0.56
NEDD8-206ENST00000531430 ZSCAN29Q8IWY8 852 aaPredicted RBP11.58□□□□□ -0.56
NEDD8-206ENST00000531430 WDR66Q8TBY9 1149 aa11.58□□□□□ -0.56
NEDD8-206ENST00000531430 SHISA4Q96DD7 197 aa11.58□□□□□ -0.56
NEDD8-206ENST00000531430 GABRQQ9UN88 632 aa11.58□□□□□ -0.56
NEDD8-206ENST00000531430 EVI5O60447 810 aa11.57□□□□□ -0.56
NEDD8-206ENST00000531430 FARP2O94887 1054 aaPredicted RBP11.57□□□□□ -0.56
NEDD8-206ENST00000531430 SLC5A1P13866 664 aa11.57□□□□□ -0.56
NEDD8-206ENST00000531430 NFIAQ12857 509 aa11.57□□□□□ -0.56
NEDD8-206ENST00000531430 ZFPM1Q8IX07 1006 aa11.57□□□□□ -0.56
NEDD8-206ENST00000531430 U2AF1L4Q8WU68 220 aaKnown RBP11.57□□□□□ -0.56
NEDD8-206ENST00000531430 PARK7Q99497 189 aaKnown RBP11.57□□□□□ -0.56
NEDD8-206ENST00000531430 UNC93B1Q9H1C4 597 aa11.57□□□□□ -0.56
NEDD8-206ENST00000531430 PICK1Q9NRD5 415 aa11.57□□□□□ -0.56
NEDD8-206ENST00000531430 SUGT1Q9Y2Z0 365 aa11.57□□□□□ -0.56
NEDD8-206ENST00000531430 ZHX2Q9Y6X8 837 aa11.57□□□□□ -0.56
NEDD8-206ENST00000531430 CACNA1FO60840 1977 aa11.56□□□□□ -0.56
NEDD8-206ENST00000531430 ADCY3O60266 1144 aa11.56□□□□□ -0.56
NEDD8-206ENST00000531430 SGPL1O95470 568 aa11.56□□□□□ -0.56
NEDD8-206ENST00000531430 LDHBP07195 334 aaKnown RBP11.56□□□□□ -0.56
NEDD8-206ENST00000531430 ELNP15502 786 aa11.56□□□□□ -0.56
NEDD8-206ENST00000531430 PUM3Q15397 648 aaKnown RBP11.56□□□□□ -0.56
NEDD8-206ENST00000531430 FAM9BQ8IZU0 186 aa11.56□□□□□ -0.56
NEDD8-206ENST00000531430 DEFB118Q96PH6 123 aa11.56□□□□□ -0.56
NEDD8-206ENST00000531430 STAP2Q9UGK3 403 aa11.56□□□□□ -0.56
NEDD8-206ENST00000531430 LRRFIP2Q9Y608 721 aaKnown RBP11.56□□□□□ -0.56
NEDD8-206ENST00000531430 A0A1B0GUL6 1792 aa11.56□□□□□ -0.56
NEDD8-206ENST00000531430 CXCL11O14625 94 aa11.55□□□□□ -0.56
NEDD8-206ENST00000531430 TNPO2O14787 897 aaKnown RBP11.55□□□□□ -0.56
NEDD8-206ENST00000531430 FLT3LGP49771 235 aa11.55□□□□□ -0.56
NEDD8-206ENST00000531430 GPAT2Q6NUI2 795 aa11.55□□□□□ -0.56
NEDD8-206ENST00000531430 FASTKD5Q7L8L6 764 aaKnown RBP11.55□□□□□ -0.56
NEDD8-206ENST00000531430 ANKRD44Q8N8A2 993 aa11.55□□□□□ -0.56
NEDD8-206ENST00000531430 SLAIN1Q8ND83 568 aa11.55□□□□□ -0.56
NEDD8-206ENST00000531430 SMCR8Q8TEV9 937 aaPredicted RBP11.55□□□□□ -0.56
NEDD8-206ENST00000531430 SIL1Q9H173 461 aa11.55□□□□□ -0.56
NEDD8-206ENST00000531430 GNL3LQ9NVN8 582 aaKnown RBP11.55□□□□□ -0.56
NEDD8-206ENST00000531430 ZNF112Q9UJU3 913 aa11.55□□□□□ -0.56
NEDD8-206ENST00000531430 KCNH4Q9UQ05 1017 aa11.55□□□□□ -0.56
NEDD8-206ENST00000531430 DAGLAQ9Y4D2 1042 aa11.55□□□□□ -0.56
NEDD8-206ENST00000531430 EYA2O00167 538 aa11.54□□□□□ -0.56
NEDD8-206ENST00000531430 ZBTB7BO15156 539 aaPredicted RBP11.54□□□□□ -0.56
NEDD8-206ENST00000531430 PRDX5P30044 214 aa11.54□□□□□ -0.56
NEDD8-206ENST00000531430 MOGSQ13724 837 aa11.54□□□□□ -0.56
NEDD8-206ENST00000531430 NCBP3Q53F19 620 aaKnown RBP11.54□□□□□ -0.56
NEDD8-206ENST00000531430 VGLL2Q8N8G2 317 aa11.54□□□□□ -0.56
NEDD8-206ENST00000531430 LPIN2Q92539 896 aa11.54□□□□□ -0.56
NEDD8-206ENST00000531430 FAM198AQ9UFP1 575 aa11.54□□□□□ -0.56
NEDD8-206ENST00000531430 LAMB1P07942 1786 aa11.54□□□□□ -0.56
NEDD8-206ENST00000531430 ARAP2Q8WZ64 1704 aa11.53□□□□□ -0.56
NEDD8-206ENST00000531430 TRIM75PA6NK02 468 aa11.53□□□□□ -0.56
NEDD8-206ENST00000531430 ANP32CO43423 234 aa11.53□□□□□ -0.56
NEDD8-206ENST00000531430 INHAP05111 366 aa11.53□□□□□ -0.56
NEDD8-206ENST00000531430 SLURP2P0DP57 97 aa11.53□□□□□ -0.56
NEDD8-206ENST00000531430 BCRP11274 1271 aa11.53□□□□□ -0.56
NEDD8-206ENST00000531430 FGFR2P21802 821 aa11.53□□□□□ -0.56
NEDD8-206ENST00000531430 RGS3P49796 1198 aa11.53□□□□□ -0.56
NEDD8-206ENST00000531430 PICALMQ13492 652 aa11.53□□□□□ -0.56
NEDD8-206ENST00000531430 RABL6Q3YEC7 729 aaPredicted RBP11.53□□□□□ -0.56
NEDD8-206ENST00000531430 COA7Q96BR5 231 aa11.53□□□□□ -0.56
NEDD8-206ENST00000531430 LRCH3Q96II8 777 aa11.53□□□□□ -0.56
NEDD8-206ENST00000531430 PAWRQ96IZ0 340 aaKnown RBP11.53□□□□□ -0.56
NEDD8-206ENST00000531430 CEP126Q9P2H0 1117 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms