RNA–Protein interactions for RNA: ENST00000526425.1

USP35-201, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best) BASIC

Gene USP35, Length 3,770 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-201ENST00000526425 ZNF513Q8N8E2 541 aaPredicted RBP11.41□□□□□ -0.58
USP35-201ENST00000526425 TM6SF1Q9BZW5 370 aa11.41□□□□□ -0.58
USP35-201ENST00000526425 PUS7LQ9H0K6 701 aaKnown RBP11.41□□□□□ -0.58
USP35-201ENST00000526425 COL14A1Q05707 1796 aaKnown RBP11.41□□□□□ -0.58
USP35-201ENST00000526425 CACNA1FO60840 1977 aa11.4□□□□□ -0.58
USP35-201ENST00000526425 BIN1O00499 593 aa11.4□□□□□ -0.58
USP35-201ENST00000526425 IFIT3O14879 490 aaKnown RBP11.4□□□□□ -0.58
USP35-201ENST00000526425 AKAP17AQ02040 695 aaKnown RBP11.4□□□□□ -0.58
USP35-201ENST00000526425 ZSCAN25Q6NSZ9 544 aa11.4□□□□□ -0.58
USP35-201ENST00000526425 CCDC112Q8NEF3 446 aa11.4□□□□□ -0.58
USP35-201ENST00000526425 ARMT1Q9H993 441 aa11.4□□□□□ -0.58
USP35-201ENST00000526425 A0A087WWV3 80 aa11.4□□□□□ -0.58
USP35-201ENST00000526425 MBD4O95243 580 aa11.4□□□□□ -0.58
USP35-201ENST00000526425 RABL6Q3YEC7 729 aaPredicted RBP11.4□□□□□ -0.58
USP35-201ENST00000526425 CCDC152Q4G0S7 254 aa11.4□□□□□ -0.58
USP35-201ENST00000526425 FNBP4Q8N3X1 1017 aaPredicted RBP11.4□□□□□ -0.58
USP35-201ENST00000526425 SCAND2PQ9GZW5 306 aaPredicted RBP11.4□□□□□ -0.58
USP35-201ENST00000526425 YY1AP1Q9H869 796 aa11.4□□□□□ -0.58
USP35-201ENST00000526425 INCENPQ9NQS7 918 aa11.4□□□□□ -0.58
USP35-201ENST00000526425 GJB4Q9NTQ9 266 aa11.4□□□□□ -0.58
USP35-201ENST00000526425 CCDC69A6NI79 296 aa11.4□□□□□ -0.59
USP35-201ENST00000526425 ADCY5O95622 1261 aa11.4□□□□□ -0.59
USP35-201ENST00000526425 FGAP02671 866 aa11.4□□□□□ -0.59
USP35-201ENST00000526425 HMGB1P09429 215 aaKnown RBP11.4□□□□□ -0.59
USP35-201ENST00000526425 LIG1P18858 919 aa11.4□□□□□ -0.59
USP35-201ENST00000526425 BCAMP50895 628 aa11.4□□□□□ -0.59
USP35-201ENST00000526425 TRIM28Q13263 835 aaKnown RBP11.4□□□□□ -0.59
USP35-201ENST00000526425 ITPK1Q13572 414 aa11.4□□□□□ -0.59
USP35-201ENST00000526425 TOB2Q14106 344 aaPredicted RBP11.4□□□□□ -0.59
USP35-201ENST00000526425 TTC6Q86TZ1 520 aa11.4□□□□□ -0.59
USP35-201ENST00000526425 NBPF5PQ86XG9 351 aaPredicted RBP11.4□□□□□ -0.59
USP35-201ENST00000526425 TTLL11Q8NHH1 800 aa11.4□□□□□ -0.59
USP35-201ENST00000526425 NCOA7Q8NI08 942 aa11.4□□□□□ -0.59
USP35-201ENST00000526425 SETDB2Q96T68 719 aa11.4□□□□□ -0.59
USP35-201ENST00000526425 MRC1P22897 1456 aa11.39□□□□□ -0.59
USP35-201ENST00000526425 KDM3BQ7LBC6 1761 aa11.39□□□□□ -0.59
USP35-201ENST00000526425 MYO1CO00159 1063 aa11.39□□□□□ -0.59
USP35-201ENST00000526425 CASQ1P31415 396 aa11.39□□□□□ -0.59
USP35-201ENST00000526425 ZNF445P59923 1031 aa11.39□□□□□ -0.59
USP35-201ENST00000526425 SATB1Q01826 763 aa11.39□□□□□ -0.59
USP35-201ENST00000526425 CTDSPL2Q05D32 466 aa11.39□□□□□ -0.59
USP35-201ENST00000526425 RPAINQ86UA6 219 aa11.39□□□□□ -0.59
USP35-201ENST00000526425 SRRTQ9BXP5 876 aaKnown RBP11.39□□□□□ -0.59
USP35-201ENST00000526425 HELLSQ9NRZ9 838 aa11.39□□□□□ -0.59
USP35-201ENST00000526425 ZNF532Q9HCE3 1301 aa11.39□□□□□ -0.59
USP35-201ENST00000526425 SCRN1Q12765 414 aa11.39□□□□□ -0.59
USP35-201ENST00000526425 TMEM67Q5HYA8 995 aa11.39□□□□□ -0.59
USP35-201ENST00000526425 RAD21O60216 631 aa11.39□□□□□ -0.59
USP35-201ENST00000526425 EIF5P55010 431 aaKnown RBP11.39□□□□□ -0.59
USP35-201ENST00000526425 CCDC102BQ68D86 513 aa11.39□□□□□ -0.59
USP35-201ENST00000526425 CFAP45Q9UL16 551 aa11.39□□□□□ -0.59
USP35-201ENST00000526425 SH3BP1Q9Y3L3 701 aa11.39□□□□□ -0.59
USP35-201ENST00000526425 RANBP6O60518 1105 aaKnown RBP11.38□□□□□ -0.59
USP35-201ENST00000526425 CYP7A1P22680 504 aa11.38□□□□□ -0.59
USP35-201ENST00000526425 MAP2K1Q02750 393 aaPredicted RBP11.38□□□□□ -0.59
USP35-201ENST00000526425 TTC31Q49AM3 519 aaPredicted RBP11.38□□□□□ -0.59
USP35-201ENST00000526425 STOX1Q6ZVD7 989 aa11.38□□□□□ -0.59
USP35-201ENST00000526425 FSIP1Q8NA03 581 aa11.38□□□□□ -0.59
USP35-201ENST00000526425 NACAP1Q9BZK3 213 aa11.38□□□□□ -0.59
USP35-201ENST00000526425 SLC24A3Q9HC58 644 aa11.38□□□□□ -0.59
USP35-201ENST00000526425 SLC4A4Q9Y6R1 1079 aa11.38□□□□□ -0.59
USP35-201ENST00000526425 DISP2A7MBM2 1401 aa11.38□□□□□ -0.59
USP35-201ENST00000526425 ECM2O94769 699 aaPredicted RBP11.38□□□□□ -0.59
USP35-201ENST00000526425 MARCKSP29966 332 aaPredicted RBP11.38□□□□□ -0.59
USP35-201ENST00000526425 SUSD4Q5VX71 490 aa11.38□□□□□ -0.59
USP35-201ENST00000526425 APPBP2Q92624 585 aa11.38□□□□□ -0.59
USP35-201ENST00000526425 PHKBQ93100 1093 aa11.38□□□□□ -0.59
USP35-201ENST00000526425 ZNF396Q96N95 335 aaPredicted RBP11.38□□□□□ -0.59
USP35-201ENST00000526425 CXorf56Q9H5V9 222 aa11.38□□□□□ -0.59
USP35-201ENST00000526425 ZNF609O15014 1411 aa11.38□□□□□ -0.59
USP35-201ENST00000526425 PRDM1O75626 825 aa11.38□□□□□ -0.59
USP35-201ENST00000526425 MNAT1P51948 309 aa11.38□□□□□ -0.59
USP35-201ENST00000526425 GRIPAP1Q4V328 841 aa11.38□□□□□ -0.59
USP35-201ENST00000526425 NOM1Q5C9Z4 860 aaKnown RBP11.38□□□□□ -0.59
USP35-201ENST00000526425 ZMYM1Q5SVZ6 1142 aa11.38□□□□□ -0.59
USP35-201ENST00000526425 CCAR1Q8IX12 1150 aaKnown RBP11.38□□□□□ -0.59
USP35-201ENST00000526425 CDC5LQ99459 802 aaKnown RBP11.38□□□□□ -0.59
USP35-201ENST00000526425 LCMT1Q9UIC8 334 aa11.38□□□□□ -0.59
USP35-201ENST00000526425 WWC3Q9ULE0 1092 aa11.38□□□□□ -0.59
USP35-201ENST00000526425 SCN11AQ9UI33 1791 aa11.37□□□□□ -0.59
USP35-201ENST00000526425 GOLGA8AA7E2F4 631 aa11.37□□□□□ -0.59
USP35-201ENST00000526425 MCAMP43121 646 aa11.37□□□□□ -0.59
USP35-201ENST00000526425 GYG1P46976 350 aa11.37□□□□□ -0.59
USP35-201ENST00000526425 CMTR1Q8N1G2 835 aaKnown RBP11.37□□□□□ -0.59
USP35-201ENST00000526425 TFCP2L1Q9NZI6 479 aa11.37□□□□□ -0.59
USP35-201ENST00000526425 ZFYP08048 801 aaPredicted RBP11.37□□□□□ -0.59
USP35-201ENST00000526425 METAP2P50579 478 aaKnown RBP eCLIP11.37□□□□□ -0.59
USP35-201ENST00000526425 LUZP1Q86V48 1076 aa11.37□□□□□ -0.59
USP35-201ENST00000526425 UBAC1Q9BSL1 405 aa11.37□□□□□ -0.59
USP35-201ENST00000526425 SLC26A6Q9BXS9 759 aa11.37□□□□□ -0.59
USP35-201ENST00000526425 USP42Q9H9J4 1324 aaKnown RBP11.37□□□□□ -0.59
USP35-201ENST00000526425 ANKRD18AQ8IVF6 992 aa11.37□□□□□ -0.59
USP35-201ENST00000526425 DNAJC25Q9H1X3 360 aa11.37□□□□□ -0.59
USP35-201ENST00000526425 GNL3LQ9NVN8 582 aaKnown RBP11.37□□□□□ -0.59
USP35-201ENST00000526425 ANKIB1Q9P2G1 1089 aa11.37□□□□□ -0.59
USP35-201ENST00000526425 H0YHG0 523 aa11.36□□□□□ -0.59
USP35-201ENST00000526425 TULP2O00295 520 aa11.36□□□□□ -0.59
USP35-201ENST00000526425 SARNPP82979 210 aaKnown RBP11.36□□□□□ -0.59
USP35-201ENST00000526425 NCBP1Q09161 790 aaKnown RBP11.36□□□□□ -0.59
USP35-201ENST00000526425 DHX8Q14562 1220 aaKnown RBP11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms