RNA–Protein interactions for RNA: ENST00000525121.2

HMGB1P40-201, Transcript of high mobility group box 1 pseudogene 40, humanhuman

BASIC

Gene HMGB1P40, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P40-201ENST00000525121 GAKO14976 1311 aa6.55□□□□□ -1.36
HMGB1P40-201ENST00000525121 TTC41PQ6P2S7 1318 aa6.55□□□□□ -1.36
HMGB1P40-201ENST00000525121 RASSF10A6NK89 507 aa6.55□□□□□ -1.36
HMGB1P40-201ENST00000525121 GOLIM4O00461 696 aa6.55□□□□□ -1.36
HMGB1P40-201ENST00000525121 CYP2E1P05181 493 aaPredicted RBP6.55□□□□□ -1.36
HMGB1P40-201ENST00000525121 CYP7A1P22680 504 aa6.55□□□□□ -1.36
HMGB1P40-201ENST00000525121 IREB2P48200 963 aaKnown RBP6.55□□□□□ -1.36
HMGB1P40-201ENST00000525121 HTRA3P83110 453 aa6.55□□□□□ -1.36
HMGB1P40-201ENST00000525121 FMR1Q06787 632 aaKnown RBP eCLIP6.55□□□□□ -1.36
HMGB1P40-201ENST00000525121 GRM1Q13255 1194 aa6.55□□□□□ -1.36
HMGB1P40-201ENST00000525121 CST9Q5W186 159 aa6.55□□□□□ -1.36
HMGB1P40-201ENST00000525121 DCAF15Q66K64 600 aa6.55□□□□□ -1.36
HMGB1P40-201ENST00000525121 APOBEC3HQ6NTF7 200 aaKnown RBP6.55□□□□□ -1.36
HMGB1P40-201ENST00000525121 CDC42EP5Q6NZY7 148 aa6.55□□□□□ -1.36
HMGB1P40-201ENST00000525121 SAPCD2Q86UD0 394 aa6.55□□□□□ -1.36
HMGB1P40-201ENST00000525121 FAM83AQ86UY5 434 aa6.55□□□□□ -1.36
HMGB1P40-201ENST00000525121 ZSCAN29Q8IWY8 852 aaPredicted RBP6.55□□□□□ -1.36
HMGB1P40-201ENST00000525121 NSUN4Q96CB9 384 aaKnown RBP6.55□□□□□ -1.36
HMGB1P40-201ENST00000525121 KLRG1Q96E93 195 aa6.55□□□□□ -1.36
HMGB1P40-201ENST00000525121 FAM163AQ96GL9 167 aaPredicted RBP6.55□□□□□ -1.36
HMGB1P40-201ENST00000525121 HHIPL1Q96JK4 782 aa6.55□□□□□ -1.36
HMGB1P40-201ENST00000525121 BOLA2Q9H3K6 86 aa6.55□□□□□ -1.36
HMGB1P40-201ENST00000525121 PIH1D3Q9NQM4 214 aaKnown RBP6.55□□□□□ -1.36
HMGB1P40-201ENST00000525121 PAG1Q9NWQ8 432 aa6.55□□□□□ -1.36
HMGB1P40-201ENST00000525121 SCAF8Q9UPN6 1271 aaKnown RBP6.55□□□□□ -1.36
HMGB1P40-201ENST00000525121 PCDHAC2Q9Y5I4 1007 aa6.55□□□□□ -1.36
HMGB1P40-201ENST00000525121 RPAP1Q9BWH6 1393 aaPredicted RBP6.55□□□□□ -1.36
HMGB1P40-201ENST00000525121 GPR75-ASB3A0A0A6YYF3 556 aa6.54□□□□□ -1.36
HMGB1P40-201ENST00000525121 ENTPD3O75355 529 aa6.54□□□□□ -1.36
HMGB1P40-201ENST00000525121 GLRX3O76003 335 aaKnown RBP6.54□□□□□ -1.36
HMGB1P40-201ENST00000525121 MX1P20591 662 aa6.54□□□□□ -1.36
HMGB1P40-201ENST00000525121 ZNF157P51786 506 aaPredicted RBP6.54□□□□□ -1.36
HMGB1P40-201ENST00000525121 CACNB3P54284 484 aa6.54□□□□□ -1.36
HMGB1P40-201ENST00000525121 TCP10Q12799 353 aa6.54□□□□□ -1.36
HMGB1P40-201ENST00000525121 PICALMQ13492 652 aa6.54□□□□□ -1.36
HMGB1P40-201ENST00000525121 PRKG1Q13976 671 aa6.54□□□□□ -1.36
HMGB1P40-201ENST00000525121 SLC9C2Q5TAH2 1124 aa6.54□□□□□ -1.36
HMGB1P40-201ENST00000525121 PRAMEF18Q5VWM3 479 aa6.54□□□□□ -1.36
HMGB1P40-201ENST00000525121 B4GALNT3Q6L9W6 998 aa6.54□□□□□ -1.36
HMGB1P40-201ENST00000525121 RGMBQ6NW40 437 aa6.54□□□□□ -1.36
HMGB1P40-201ENST00000525121 TEX11Q8IYF3 940 aa6.54□□□□□ -1.36
HMGB1P40-201ENST00000525121 MAGEB6Q8N7X4 407 aa6.54□□□□□ -1.36
HMGB1P40-201ENST00000525121 FAM151AQ8WW52 585 aa6.54□□□□□ -1.36
HMGB1P40-201ENST00000525121 CCDC102AQ96A19 550 aa6.54□□□□□ -1.36
HMGB1P40-201ENST00000525121 AIDAQ96BJ3 306 aa6.54□□□□□ -1.36
HMGB1P40-201ENST00000525121 DDRGK1Q96HY6 314 aa6.54□□□□□ -1.36
HMGB1P40-201ENST00000525121 CAPNS2Q96L46 248 aa6.54□□□□□ -1.36
HMGB1P40-201ENST00000525121 HAUS7Q99871 368 aa6.54□□□□□ -1.36
HMGB1P40-201ENST00000525121 BEGAINQ9BUH8 593 aa6.54□□□□□ -1.36
HMGB1P40-201ENST00000525121 TRIM34Q9BYJ4 488 aa6.54□□□□□ -1.36
HMGB1P40-201ENST00000525121 ANGEL1Q9UNK9 670 aaKnown RBP6.54□□□□□ -1.36
HMGB1P40-201ENST00000525121 MAST2Q6P0Q8 1798 aa6.54□□□□□ -1.36
HMGB1P40-201ENST00000525121 PAPPA2Q9BXP8 1791 aa6.54□□□□□ -1.36
HMGB1P40-201ENST00000525121 MAGEB6P1A0A0J9YX57 407 aa6.53□□□□□ -1.36
HMGB1P40-201ENST00000525121 UNCXA6NJT0 531 aa6.53□□□□□ -1.36
HMGB1P40-201ENST00000525121 USP5P45974 858 aa6.53□□□□□ -1.36
HMGB1P40-201ENST00000525121 RGS3P49796 1198 aa6.53□□□□□ -1.36
HMGB1P40-201ENST00000525121 NOGQ13253 232 aa6.53□□□□□ -1.36
HMGB1P40-201ENST00000525121 NBPF12Q5TAG4 269 aaPredicted RBP6.53□□□□□ -1.36
HMGB1P40-201ENST00000525121 DLK2Q6UY11 383 aa6.53□□□□□ -1.36
HMGB1P40-201ENST00000525121 CHD1LQ86WJ1 897 aa6.53□□□□□ -1.36
HMGB1P40-201ENST00000525121 SMC5Q8IY18 1101 aa6.53□□□□□ -1.36
HMGB1P40-201ENST00000525121 AMOTL1Q8IY63 956 aa6.53□□□□□ -1.36
HMGB1P40-201ENST00000525121 CSRNP1Q96S65 589 aa6.53□□□□□ -1.36
HMGB1P40-201ENST00000525121 IDI2Q9BXS1 227 aa6.53□□□□□ -1.36
HMGB1P40-201ENST00000525121 CRNKL1Q9BZJ0 848 aaKnown RBP6.53□□□□□ -1.36
HMGB1P40-201ENST00000525121 LNPKQ9C0E8 428 aa6.53□□□□□ -1.36
HMGB1P40-201ENST00000525121 TMEM39BQ9GZU3 492 aa6.53□□□□□ -1.36
HMGB1P40-201ENST00000525121 ANTXR1Q9H6X2 564 aa6.53□□□□□ -1.36
HMGB1P40-201ENST00000525121 AATFQ9NY61 560 aaKnown RBP eCLIP6.53□□□□□ -1.36
HMGB1P40-201ENST00000525121 CSADQ9Y600 493 aa6.53□□□□□ -1.36
HMGB1P40-201ENST00000525121 NDUFB9Q9Y6M9 179 aa6.53□□□□□ -1.36
HMGB1P40-201ENST00000525121 AOX1Q06278 1338 aa6.52□□□□□ -1.37
HMGB1P40-201ENST00000525121 WDR33Q9C0J8 1336 aaKnown RBP6.52□□□□□ -1.37
HMGB1P40-201ENST00000525121 UBE2Q2LH0YL09 131 aa6.52□□□□□ -1.37
HMGB1P40-201ENST00000525121 NPM3O75607 178 aaKnown RBP6.52□□□□□ -1.37
HMGB1P40-201ENST00000525121 HLA-DOAP06340 250 aa6.52□□□□□ -1.37
HMGB1P40-201ENST00000525121 ZFYP08048 801 aaPredicted RBP6.52□□□□□ -1.37
HMGB1P40-201ENST00000525121 PDE6AP16499 860 aa6.52□□□□□ -1.37
HMGB1P40-201ENST00000525121 MAP2K2P36507 400 aa6.52□□□□□ -1.37
HMGB1P40-201ENST00000525121 VEGFBP49765 207 aa6.52□□□□□ -1.37
HMGB1P40-201ENST00000525121 PPP4CP60510 307 aa6.52□□□□□ -1.37
HMGB1P40-201ENST00000525121 MAP2K1Q02750 393 aaPredicted RBP6.52□□□□□ -1.37
HMGB1P40-201ENST00000525121 NUCB1Q02818 461 aa6.52□□□□□ -1.37
HMGB1P40-201ENST00000525121 NFIAQ12857 509 aa6.52□□□□□ -1.37
HMGB1P40-201ENST00000525121 TSHZ3Q63HK5 1081 aa6.52□□□□□ -1.37
HMGB1P40-201ENST00000525121 CYP4F22Q6NT55 531 aa6.52□□□□□ -1.37
HMGB1P40-201ENST00000525121 REM2Q8IYK8 340 aaPredicted RBP6.52□□□□□ -1.37
HMGB1P40-201ENST00000525121 ANKRD13AQ8IZ07 590 aa6.52□□□□□ -1.37
HMGB1P40-201ENST00000525121 KBTBD3Q8NAB2 608 aa6.52□□□□□ -1.37
HMGB1P40-201ENST00000525121 MIGA1Q8NAN2 632 aa6.52□□□□□ -1.37
HMGB1P40-201ENST00000525121 SH3RF3Q8TEJ3 882 aaPredicted RBP6.52□□□□□ -1.37
HMGB1P40-201ENST00000525121 SLC10A4Q96EP9 437 aa6.52□□□□□ -1.37
HMGB1P40-201ENST00000525121 WRNIP1Q96S55 665 aa6.52□□□□□ -1.37
HMGB1P40-201ENST00000525121 FSD1Q9BTV5 496 aa6.52□□□□□ -1.37
HMGB1P40-201ENST00000525121 ZNF341Q9BYN7 854 aa6.52□□□□□ -1.37
HMGB1P40-201ENST00000525121 DHX36Q9H2U1 1008 aaKnown RBP6.52□□□□□ -1.37
HMGB1P40-201ENST00000525121 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.52□□□□□ -1.37
HMGB1P40-201ENST00000525121 ECM29Q5VYK3 1845 aa6.52□□□□□ -1.37
HMGB1P40-201ENST00000525121 ZNF532Q9HCE3 1301 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 117.5 ms