RNA–Protein interactions for RNA: ENST00000524111.5

SREK1-215, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 5

Gene SREK1, Length 4,074 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-215ENST00000524111 UBN2Q6ZU65 1347 aa10.06□□□□□ -0.8
SREK1-215ENST00000524111 DIS3L2Q8IYB7 885 aaKnown RBP10.06□□□□□ -0.8
SREK1-215ENST00000524111 STAMQ92783 540 aa10.06□□□□□ -0.8
SREK1-215ENST00000524111 CABP5Q9NP86 173 aa10.06□□□□□ -0.8
SREK1-215ENST00000524111 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.06□□□□□ -0.8
SREK1-215ENST00000524111 V9GYY5 206 aaPredicted RBP10.06□□□□□ -0.8
SREK1-215ENST00000524111 IFIT1BQ5T764 474 aaKnown RBP10.06□□□□□ -0.8
SREK1-215ENST00000524111 AMOTL1Q8IY63 956 aa10.06□□□□□ -0.8
SREK1-215ENST00000524111 TMEM87AQ8NBN3 555 aa10.06□□□□□ -0.8
SREK1-215ENST00000524111 GOLPH3LQ9H4A5 285 aa10.06□□□□□ -0.8
SREK1-215ENST00000524111 MCM9Q9NXL9 1143 aa10.06□□□□□ -0.8
SREK1-215ENST00000524111 C6orf229H3BNL8 230 aa10.05□□□□□ -0.8
SREK1-215ENST00000524111 NEDD4P46934 1319 aa10.05□□□□□ -0.8
SREK1-215ENST00000524111 ITPK1Q13572 414 aa10.05□□□□□ -0.8
SREK1-215ENST00000524111 AKNAD1Q5T1N1 836 aa10.05□□□□□ -0.8
SREK1-215ENST00000524111 ESR2Q92731 530 aa10.05□□□□□ -0.8
SREK1-215ENST00000524111 PDLIM2Q96JY6 352 aa10.05□□□□□ -0.8
SREK1-215ENST00000524111 IFNKQ9P0W0 207 aa10.05□□□□□ -0.8
SREK1-215ENST00000524111 CCNL1Q9UK58 526 aaPredicted RBP10.05□□□□□ -0.8
SREK1-215ENST00000524111 CAMTA1Q9Y6Y1 1673 aa10.05□□□□□ -0.8
SREK1-215ENST00000524111 USP17L12C9JPN9 530 aa10.05□□□□□ -0.8
SREK1-215ENST00000524111 USP17L21D6R901 530 aa10.05□□□□□ -0.8
SREK1-215ENST00000524111 ZNF202O95125 648 aa10.05□□□□□ -0.8
SREK1-215ENST00000524111 ARID5BQ14865 1188 aa10.05□□□□□ -0.8
SREK1-215ENST00000524111 CATIPQ7Z7H3 387 aa10.05□□□□□ -0.8
SREK1-215ENST00000524111 MARCH10Q8NA82 808 aaPredicted RBP10.05□□□□□ -0.8
SREK1-215ENST00000524111 RNF41Q9H4P4 317 aaPredicted RBP10.05□□□□□ -0.8
SREK1-215ENST00000524111 VPS54Q9P1Q0 977 aa10.05□□□□□ -0.8
SREK1-215ENST00000524111 V9GY48 417 aaPredicted RBP10.05□□□□□ -0.8
SREK1-215ENST00000524111 MROH5Q6ZUA9 1318 aa10.05□□□□□ -0.8
SREK1-215ENST00000524111 CTAGE5O15320 804 aa10.05□□□□□ -0.8
SREK1-215ENST00000524111 TNNT1P13805 278 aa10.05□□□□□ -0.8
SREK1-215ENST00000524111 ZNF827Q17R98 1081 aa10.05□□□□□ -0.8
SREK1-215ENST00000524111 HS1BP3Q53T59 392 aa10.05□□□□□ -0.8
SREK1-215ENST00000524111 CTCFLQ8NI51 663 aaPredicted RBP10.05□□□□□ -0.8
SREK1-215ENST00000524111 CPLX3Q8WVH0 158 aa10.05□□□□□ -0.8
SREK1-215ENST00000524111 ZBTB9Q96C00 473 aa10.05□□□□□ -0.8
SREK1-215ENST00000524111 CCDC34Q96HJ3 373 aa10.05□□□□□ -0.8
SREK1-215ENST00000524111 STRBPQ96SI9 672 aaKnown RBP10.05□□□□□ -0.8
SREK1-215ENST00000524111 KRT23Q9C075 422 aa10.05□□□□□ -0.8
SREK1-215ENST00000524111 BRMS1Q9HCU9 246 aa10.05□□□□□ -0.8
SREK1-215ENST00000524111 TCHHQ07283 1943 aa10.04□□□□□ -0.8
SREK1-215ENST00000524111 CPDO75976 1380 aa10.04□□□□□ -0.8
SREK1-215ENST00000524111 SKILP12757 684 aa10.04□□□□□ -0.8
SREK1-215ENST00000524111 EXOSC10Q01780 885 aaKnown RBP10.04□□□□□ -0.8
SREK1-215ENST00000524111 AK7Q96M32 723 aa10.04□□□□□ -0.8
SREK1-215ENST00000524111 SAP30BPQ9UHR5 308 aaKnown RBP10.04□□□□□ -0.8
SREK1-215ENST00000524111 KDM4FA0A1W2PPD8 638 aa10.04□□□□□ -0.8
SREK1-215ENST00000524111 PATL2C9JE40 543 aaKnown RBP10.04□□□□□ -0.8
SREK1-215ENST00000524111 MARCH6O60337 910 aa10.04□□□□□ -0.8
SREK1-215ENST00000524111 CDC27P30260 824 aa10.04□□□□□ -0.8
SREK1-215ENST00000524111 STX17P56962 302 aa10.04□□□□□ -0.8
SREK1-215ENST00000524111 NR5A1Q13285 461 aa10.04□□□□□ -0.8
SREK1-215ENST00000524111 NKX1-1Q15270 411 aaPredicted RBP10.04□□□□□ -0.8
SREK1-215ENST00000524111 PARP10Q53GL7 1025 aa10.04□□□□□ -0.8
SREK1-215ENST00000524111 RTCBQ9Y3I0 505 aaKnown RBP10.04□□□□□ -0.8
SREK1-215ENST00000524111 CCDC196A0A1B0GTZ2 297 aa10.04□□□□□ -0.8
SREK1-215ENST00000524111 SMIM22K7EJ46 135 aa10.04□□□□□ -0.8
SREK1-215ENST00000524111 ZNF75DP51815 510 aa10.04□□□□□ -0.8
SREK1-215ENST00000524111 ANTXR2P58335 489 aa10.04□□□□□ -0.8
SREK1-215ENST00000524111 NLRP5P59047 1200 aa10.04□□□□□ -0.8
SREK1-215ENST00000524111 TRIM28Q13263 835 aaKnown RBP10.04□□□□□ -0.8
SREK1-215ENST00000524111 CELF1Q92879 486 aaKnown RBP10.04□□□□□ -0.8
SREK1-215ENST00000524111 SMARCC1Q92922 1105 aaPredicted RBP10.04□□□□□ -0.8
SREK1-215ENST00000524111 TOM1O60784 492 aa10.03□□□□□ -0.8
SREK1-215ENST00000524111 PFKFB1P16118 471 aa10.03□□□□□ -0.8
SREK1-215ENST00000524111 PNOCQ13519 176 aa10.03□□□□□ -0.8
SREK1-215ENST00000524111 DPCR1Q3MIW9 517 aa10.03□□□□□ -0.8
SREK1-215ENST00000524111 TSGA10IPQ3SY00 556 aa10.03□□□□□ -0.8
SREK1-215ENST00000524111 KCNB2Q92953 911 aa10.03□□□□□ -0.8
SREK1-215ENST00000524111 DHX58Q96C10 678 aa10.03□□□□□ -0.8
SREK1-215ENST00000524111 PLIN2Q99541 437 aa10.03□□□□□ -0.8
SREK1-215ENST00000524111 HOOK1Q9UJC3 728 aaKnown RBP10.03□□□□□ -0.8
SREK1-215ENST00000524111 COL5A2P05997 1499 aaPredicted RBP10.03□□□□□ -0.8
SREK1-215ENST00000524111 KIF28PB7ZC32 967 aa10.03□□□□□ -0.8
SREK1-215ENST00000524111 CSF1RP07333 972 aa10.03□□□□□ -0.8
SREK1-215ENST00000524111 FDPSP14324 419 aaKnown RBP10.03□□□□□ -0.8
SREK1-215ENST00000524111 SFPQP23246 707 aaKnown RBP eCLIP10.03□□□□□ -0.8
SREK1-215ENST00000524111 RPS8P62241 208 aaKnown RBP10.03□□□□□ -0.8
SREK1-215ENST00000524111 UBE3CQ15386 1083 aa10.03□□□□□ -0.8
SREK1-215ENST00000524111 TPTE2Q6XPS3 522 aa10.03□□□□□ -0.8
SREK1-215ENST00000524111 MB21D2Q8IYB1 491 aaPredicted RBP10.03□□□□□ -0.8
SREK1-215ENST00000524111 CNNM2Q9H8M5 875 aa10.03□□□□□ -0.8
SREK1-215ENST00000524111 PALLDQ8WX93 1383 aa10.03□□□□□ -0.8
SREK1-215ENST00000524111 AP5Z1O43299 807 aa10.03□□□□□ -0.8
SREK1-215ENST00000524111 TPM3P06753 285 aa10.03□□□□□ -0.8
SREK1-215ENST00000524111 WASF1Q92558 559 aa10.03□□□□□ -0.8
SREK1-215ENST00000524111 RCOR1Q9UKL0 485 aa10.03□□□□□ -0.8
SREK1-215ENST00000524111 MED1Q15648 1581 aaPredicted RBP10.03□□□□□ -0.8
SREK1-215ENST00000524111 FAM208AQ9UK61 1670 aaKnown RBP10.03□□□□□ -0.8
SREK1-215ENST00000524111 PPARAQ07869 468 aa10.02□□□□□ -0.8
SREK1-215ENST00000524111 ZNF174Q15697 407 aa10.02□□□□□ -0.8
SREK1-215ENST00000524111 PTF1AQ7RTS3 328 aa10.02□□□□□ -0.8
SREK1-215ENST00000524111 CCDC112Q8NEF3 446 aa10.02□□□□□ -0.8
SREK1-215ENST00000524111 RPGRQ92834 1020 aaKnown RBP10.02□□□□□ -0.8
SREK1-215ENST00000524111 PRDM10Q9NQV6 1147 aa10.02□□□□□ -0.8
SREK1-215ENST00000524111 ELP1O95163 1332 aa10.02□□□□□ -0.8
SREK1-215ENST00000524111 HIBADHP31937 336 aaKnown RBP10.02□□□□□ -0.81
SREK1-215ENST00000524111 BRAPQ7Z569 592 aa10.02□□□□□ -0.81
SREK1-215ENST00000524111 TRMT44Q8IYL2 757 aaKnown RBP10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms