RNA–Protein interactions for RNA: ENST00000523685.5

CTNNA1-239, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-239ENST00000523685 CCDC27Q2M243 656 aa7.29□□□□□ -1.24
CTNNA1-239ENST00000523685 NOM1Q5C9Z4 860 aaKnown RBP7.29□□□□□ -1.24
CTNNA1-239ENST00000523685 ALKBH2Q6NS38 261 aa7.29□□□□□ -1.24
CTNNA1-239ENST00000523685 MPRIPQ6WCQ1 1025 aa7.29□□□□□ -1.24
CTNNA1-239ENST00000523685 RIPOR1Q6ZS17 1223 aa7.29□□□□□ -1.24
CTNNA1-239ENST00000523685 ZNF280CQ8ND82 737 aa7.29□□□□□ -1.24
CTNNA1-239ENST00000523685 TESK2Q96S53 571 aa7.29□□□□□ -1.24
CTNNA1-239ENST00000523685 RUBCNLQ9H714 662 aa7.29□□□□□ -1.24
CTNNA1-239ENST00000523685 GJA3Q9Y6H8 435 aa7.29□□□□□ -1.24
CTNNA1-239ENST00000523685 USP54Q70EL1 1684 aa7.28□□□□□ -1.24
CTNNA1-239ENST00000523685 SMG6Q86US8 1419 aaKnown RBP7.28□□□□□ -1.24
CTNNA1-239ENST00000523685 TGFBR3LH3BV60 316 aa7.28□□□□□ -1.24
CTNNA1-239ENST00000523685 ZBTB39O15060 712 aa7.28□□□□□ -1.24
CTNNA1-239ENST00000523685 GRIN3BO60391 1043 aa7.28□□□□□ -1.24
CTNNA1-239ENST00000523685 ARHGAP4P98171 946 aa7.28□□□□□ -1.24
CTNNA1-239ENST00000523685 AAMPQ13685 434 aa7.28□□□□□ -1.24
CTNNA1-239ENST00000523685 EFHC2Q5JST6 749 aa7.28□□□□□ -1.24
CTNNA1-239ENST00000523685 FAM26DQ5JW98 314 aa7.28□□□□□ -1.24
CTNNA1-239ENST00000523685 LRRC69Q6ZNQ3 347 aa7.28□□□□□ -1.24
CTNNA1-239ENST00000523685 NLRP8Q86W28 1048 aa7.28□□□□□ -1.24
CTNNA1-239ENST00000523685 ETFBKMTQ8IXQ9 262 aa7.28□□□□□ -1.24
CTNNA1-239ENST00000523685 CCDC155Q8N6L0 562 aa7.28□□□□□ -1.24
CTNNA1-239ENST00000523685 KLRG1Q96E93 195 aa7.28□□□□□ -1.24
CTNNA1-239ENST00000523685 HSH2DQ96JZ2 352 aa7.28□□□□□ -1.24
CTNNA1-239ENST00000523685 PUS7Q96PZ0 661 aaKnown RBP7.28□□□□□ -1.24
CTNNA1-239ENST00000523685 BCS1LQ9Y276 419 aa7.28□□□□□ -1.24
CTNNA1-239ENST00000523685 DOT1LQ8TEK3 1739 aa7.27□□□□□ -1.25
CTNNA1-239ENST00000523685 H7C1W4 665 aa7.27□□□□□ -1.25
CTNNA1-239ENST00000523685 FYB1O15117 783 aa7.27□□□□□ -1.25
CTNNA1-239ENST00000523685 PPM1GO15355 546 aaPredicted RBP7.27□□□□□ -1.25
CTNNA1-239ENST00000523685 MICAL2O94851 1124 aa7.27□□□□□ -1.25
CTNNA1-239ENST00000523685 EIF1AXP47813 144 aaKnown RBP7.27□□□□□ -1.25
CTNNA1-239ENST00000523685 MFAP1P55081 439 aaKnown RBP7.27□□□□□ -1.25
CTNNA1-239ENST00000523685 HSP90AB2PQ58FF8 381 aa7.27□□□□□ -1.25
CTNNA1-239ENST00000523685 IER5Q5VY09 327 aa7.27□□□□□ -1.25
CTNNA1-239ENST00000523685 SMIM5Q71RC9 77 aa7.27□□□□□ -1.25
CTNNA1-239ENST00000523685 TREML1Q86YW5 311 aa7.27□□□□□ -1.25
CTNNA1-239ENST00000523685 ZNF526Q8TF50 670 aaPredicted RBP7.27□□□□□ -1.25
CTNNA1-239ENST00000523685 PCDH11XQ9BZA7 1347 aa7.27□□□□□ -1.25
CTNNA1-239ENST00000523685 PCDH11YQ9BZA8 1340 aa7.27□□□□□ -1.25
CTNNA1-239ENST00000523685 RTL1A6NKG5 1358 aa7.26□□□□□ -1.25
CTNNA1-239ENST00000523685 PALLDQ8WX93 1383 aa7.26□□□□□ -1.25
CTNNA1-239ENST00000523685 POTECB2RU33 542 aa7.26□□□□□ -1.25
CTNNA1-239ENST00000523685 TMF1P82094 1093 aa7.26□□□□□ -1.25
CTNNA1-239ENST00000523685 LBRQ14739 615 aaKnown RBP7.26□□□□□ -1.25
CTNNA1-239ENST00000523685 DMGDHQ9UI17 866 aaKnown RBP7.26□□□□□ -1.25
CTNNA1-239ENST00000523685 CHD4Q14839 1912 aa7.26□□□□□ -1.25
CTNNA1-239ENST00000523685 CGNL1Q0VF96 1302 aa7.26□□□□□ -1.25
CTNNA1-239ENST00000523685 FAM208AQ9UK61 1670 aaKnown RBP7.25□□□□□ -1.25
CTNNA1-239ENST00000523685 CYP27B1O15528 508 aa7.25□□□□□ -1.25
CTNNA1-239ENST00000523685 ZAP70P43403 619 aa7.25□□□□□ -1.25
CTNNA1-239ENST00000523685 MARSP56192 900 aaKnown RBP7.25□□□□□ -1.25
CTNNA1-239ENST00000523685 BTLAQ7Z6A9 289 aa7.25□□□□□ -1.25
CTNNA1-239ENST00000523685 ATCAYQ86WG3 371 aa7.25□□□□□ -1.25
CTNNA1-239ENST00000523685 FLAD1Q8NFF5 587 aa7.25□□□□□ -1.25
CTNNA1-239ENST00000523685 GMCL1Q96IK5 515 aa7.25□□□□□ -1.25
CTNNA1-239ENST00000523685 NUCKS1Q9H1E3 243 aaKnown RBP7.25□□□□□ -1.25
CTNNA1-239ENST00000523685 FAM13BQ9NYF5 915 aa7.25□□□□□ -1.25
CTNNA1-239ENST00000523685 RGPD2P0DJD1 1756 aa7.25□□□□□ -1.25
CTNNA1-239ENST00000523685 ATP10DQ9P241 1426 aa7.25□□□□□ -1.25
CTNNA1-239ENST00000523685 TUBGCP6Q96RT7 1819 aa7.24□□□□□ -1.25
CTNNA1-239ENST00000523685 INSRP06213 1382 aa7.24□□□□□ -1.25
CTNNA1-239ENST00000523685 FLT4P35916 1363 aa7.24□□□□□ -1.25
CTNNA1-239ENST00000523685 OPLAHO14841 1288 aa7.24□□□□□ -1.25
CTNNA1-239ENST00000523685 ITGA6P23229 1130 aa7.24□□□□□ -1.25
CTNNA1-239ENST00000523685 IDH3AP50213 366 aa7.24□□□□□ -1.25
CTNNA1-239ENST00000523685 DBN1Q16643 649 aa7.24□□□□□ -1.25
CTNNA1-239ENST00000523685 SAMD5Q5TGI4 173 aa7.24□□□□□ -1.25
CTNNA1-239ENST00000523685 FIGNL1Q6PIW4 674 aa7.24□□□□□ -1.25
CTNNA1-239ENST00000523685 AMIGO3Q86WK7 504 aa7.24□□□□□ -1.25
CTNNA1-239ENST00000523685 TRIM22Q8IYM9 498 aa7.24□□□□□ -1.25
CTNNA1-239ENST00000523685 SMARCC1Q92922 1105 aaPredicted RBP7.24□□□□□ -1.25
CTNNA1-239ENST00000523685 POLR3GLQ9BT43 218 aa7.24□□□□□ -1.25
CTNNA1-239ENST00000523685 ZCCHC2Q9C0B9 1178 aaKnown RBP7.24□□□□□ -1.25
CTNNA1-239ENST00000523685 DCTN4Q9UJW0 460 aa7.24□□□□□ -1.25
CTNNA1-239ENST00000523685 BRPF3Q9ULD4 1205 aa7.24□□□□□ -1.25
CTNNA1-239ENST00000523685 CD2APQ9Y5K6 639 aa7.24□□□□□ -1.25
CTNNA1-239ENST00000523685 GOLGB1Q14789 3259 aaKnown RBP7.24□□□□□ -1.25
CTNNA1-239ENST00000523685 IGSF1Q8N6C5 1336 aa7.24□□□□□ -1.25
CTNNA1-239ENST00000523685 FZD6O60353 706 aa7.23□□□□□ -1.25
CTNNA1-239ENST00000523685 PPFIA3O75145 1194 aa7.23□□□□□ -1.25
CTNNA1-239ENST00000523685 MAPK1P28482 360 aa7.23□□□□□ -1.25
CTNNA1-239ENST00000523685 PIGBQ92521 554 aa7.23□□□□□ -1.25
CTNNA1-239ENST00000523685 CEP63Q96MT8 703 aa7.23□□□□□ -1.25
CTNNA1-239ENST00000523685 CCDC87Q9NVE4 849 aa7.23□□□□□ -1.25
CTNNA1-239ENST00000523685 CUEDC1Q9NWM3 386 aaPredicted RBP7.23□□□□□ -1.25
CTNNA1-239ENST00000523685 TMOD3Q9NYL9 352 aa7.23□□□□□ -1.25
CTNNA1-239ENST00000523685 SPG7Q9UQ90 795 aa7.23□□□□□ -1.25
CTNNA1-239ENST00000523685 LY75O60449 1722 aa7.23□□□□□ -1.25
CTNNA1-239ENST00000523685 QSER1Q2KHR3 1735 aa7.23□□□□□ -1.25
CTNNA1-239ENST00000523685 SHANK3Q9BYB0 1731 aa7.23□□□□□ -1.25
CTNNA1-239ENST00000523685 NSD3Q9BZ95 1437 aa7.22□□□□□ -1.25
CTNNA1-239ENST00000523685 LOC102724428A0A0B4J2F2 783 aa7.22□□□□□ -1.25
CTNNA1-239ENST00000523685 ATXN7O15265 892 aaPredicted RBP7.22□□□□□ -1.25
CTNNA1-239ENST00000523685 NDUFB5O43674 189 aa7.22□□□□□ -1.25
CTNNA1-239ENST00000523685 THBS1P07996 1170 aa7.22□□□□□ -1.25
CTNNA1-239ENST00000523685 PCSK2P16519 638 aa7.22□□□□□ -1.25
CTNNA1-239ENST00000523685 HMGB2P26583 209 aaKnown RBP7.22□□□□□ -1.25
CTNNA1-239ENST00000523685 MZF1P28698 734 aaPredicted RBP7.22□□□□□ -1.25
CTNNA1-239ENST00000523685 INPP5BP32019 993 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms