RNA–Protein interactions for RNA: ENST00000523488.5

CSMD1-213, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 1 (best)

Gene CSMD1, Length 3,714 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-213ENST00000523488 HNRNPH1P31943 449 aaKnown RBP9.62□□□□□ -0.87
CSMD1-213ENST00000523488 SARSP49591 514 aaKnown RBP9.62□□□□□ -0.87
CSMD1-213ENST00000523488 C6orf89Q6UWU4 347 aa9.62□□□□□ -0.87
CSMD1-213ENST00000523488 FMNL2Q96PY5 1086 aa9.62□□□□□ -0.87
CSMD1-213ENST00000523488 SUFUQ9UMX1 484 aa9.62□□□□□ -0.87
CSMD1-213ENST00000523488 MAP4K4O95819 1239 aaPredicted RBP9.61□□□□□ -0.87
CSMD1-213ENST00000523488 BRAPQ7Z569 592 aa9.61□□□□□ -0.87
CSMD1-213ENST00000523488 NSUN7Q8NE18 718 aaKnown RBP9.61□□□□□ -0.87
CSMD1-213ENST00000523488 RUFY2Q8WXA3 655 aa9.61□□□□□ -0.87
CSMD1-213ENST00000523488 PSMD1Q99460 953 aa9.61□□□□□ -0.87
CSMD1-213ENST00000523488 AKAP11Q9UKA4 1901 aa9.61□□□□□ -0.87
CSMD1-213ENST00000523488 KINO60870 393 aaKnown RBP9.61□□□□□ -0.87
CSMD1-213ENST00000523488 CPA1P15085 419 aa9.61□□□□□ -0.87
CSMD1-213ENST00000523488 CALRP27797 417 aaKnown RBP9.61□□□□□ -0.87
CSMD1-213ENST00000523488 CEBPZQ03701 1054 aaKnown RBP9.61□□□□□ -0.87
CSMD1-213ENST00000523488 CEP112Q8N8E3 955 aa9.61□□□□□ -0.87
CSMD1-213ENST00000523488 NECAB1Q8N987 351 aa9.61□□□□□ -0.87
CSMD1-213ENST00000523488 JAKMIP1Q96N16 626 aaKnown RBP9.61□□□□□ -0.87
CSMD1-213ENST00000523488 CDC23Q9UJX2 597 aa9.61□□□□□ -0.87
CSMD1-213ENST00000523488 MINK1Q8N4C8 1332 aaPredicted RBP9.61□□□□□ -0.87
CSMD1-213ENST00000523488 SH3TC1Q8TE82 1336 aa9.61□□□□□ -0.87
CSMD1-213ENST00000523488 H3BQV1 296 aa9.61□□□□□ -0.87
CSMD1-213ENST00000523488 IDI1Q13907 227 aa9.61□□□□□ -0.87
CSMD1-213ENST00000523488 EIF4A2Q14240 407 aaKnown RBP9.61□□□□□ -0.87
CSMD1-213ENST00000523488 IFFO2Q5TF58 517 aa9.61□□□□□ -0.87
CSMD1-213ENST00000523488 GBP6Q6ZN66 633 aa9.61□□□□□ -0.87
CSMD1-213ENST00000523488 TATDN2Q93075 761 aa9.61□□□□□ -0.87
CSMD1-213ENST00000523488 EPC1Q9H2F5 836 aa9.61□□□□□ -0.87
CSMD1-213ENST00000523488 WHAMMP3Q1A5X7 153 aa9.6□□□□□ -0.87
CSMD1-213ENST00000523488 POTEDQ86YR6 584 aa9.6□□□□□ -0.87
CSMD1-213ENST00000523488 GIMAP7Q8NHV1 300 aa9.6□□□□□ -0.87
CSMD1-213ENST00000523488 MIEF2Q96C03 454 aa9.6□□□□□ -0.87
CSMD1-213ENST00000523488 MYH1P12882 1939 aa9.6□□□□□ -0.87
CSMD1-213ENST00000523488 ERLIN1O75477 346 aa9.6□□□□□ -0.87
CSMD1-213ENST00000523488 FAM69CQ0P6D2 419 aa9.6□□□□□ -0.87
CSMD1-213ENST00000523488 HSP90AB4PQ58FF6 505 aa9.6□□□□□ -0.87
CSMD1-213ENST00000523488 NBPF10Q6P3W6 841 aaKnown RBP9.6□□□□□ -0.87
CSMD1-213ENST00000523488 DDX54Q8TDD1 881 aaKnown RBP9.6□□□□□ -0.87
CSMD1-213ENST00000523488 CDK19Q9BWU1 502 aa9.6□□□□□ -0.87
CSMD1-213ENST00000523488 ACBD3Q9H3P7 528 aa9.6□□□□□ -0.87
CSMD1-213ENST00000523488 ATRNO75882 1429 aa9.6□□□□□ -0.87
CSMD1-213ENST00000523488 ZKSCAN1P17029 563 aaPredicted RBP9.6□□□□□ -0.87
CSMD1-213ENST00000523488 AOPEPQ8N6M6 819 aa9.6□□□□□ -0.87
CSMD1-213ENST00000523488 LINC00301Q8NCQ3 95 aa9.6□□□□□ -0.87
CSMD1-213ENST00000523488 SDF4Q9BRK5 362 aa9.6□□□□□ -0.87
CSMD1-213ENST00000523488 SENP2Q9HC62 589 aa9.6□□□□□ -0.87
CSMD1-213ENST00000523488 HPCAL4Q9UM19 191 aa9.6□□□□□ -0.87
CSMD1-213ENST00000523488 SEMA3EO15041 775 aa9.59□□□□□ -0.87
CSMD1-213ENST00000523488 PHACTR2O75167 634 aa9.59□□□□□ -0.87
CSMD1-213ENST00000523488 KRT32Q14532 448 aa9.59□□□□□ -0.87
CSMD1-213ENST00000523488 HSP90AB3PQ58FF7 597 aa9.59□□□□□ -0.87
CSMD1-213ENST00000523488 ZSWIM4Q9H7M6 989 aa9.59□□□□□ -0.87
CSMD1-213ENST00000523488 RBM8AQ9Y5S9 174 aaKnown RBP9.59□□□□□ -0.87
CSMD1-213ENST00000523488 ZNF609O15014 1411 aa9.59□□□□□ -0.87
CSMD1-213ENST00000523488 A0A1B0GUL6 1792 aa9.59□□□□□ -0.87
CSMD1-213ENST00000523488 FAM83GA6ND36 823 aa9.59□□□□□ -0.87
CSMD1-213ENST00000523488 LRRIQ3A6PVS8 624 aaPredicted RBP9.59□□□□□ -0.87
CSMD1-213ENST00000523488 CBFA2T2O43439 604 aa9.59□□□□□ -0.87
CSMD1-213ENST00000523488 FLIIQ13045 1269 aa9.59□□□□□ -0.87
CSMD1-213ENST00000523488 CASP8Q14790 479 aa9.59□□□□□ -0.87
CSMD1-213ENST00000523488 DPCR1Q3MIW9 517 aa9.59□□□□□ -0.87
CSMD1-213ENST00000523488 BEND3Q5T5X7 828 aa9.59□□□□□ -0.87
CSMD1-213ENST00000523488 PURBQ96QR8 312 aaKnown RBP9.59□□□□□ -0.87
CSMD1-213ENST00000523488 C19orf44Q9H6X5 657 aa9.59□□□□□ -0.87
CSMD1-213ENST00000523488 GNG11P61952 73 aa9.59□□□□□ -0.87
CSMD1-213ENST00000523488 FANCCQ00597 558 aa9.59□□□□□ -0.87
CSMD1-213ENST00000523488 CRYMQ14894 314 aa9.59□□□□□ -0.87
CSMD1-213ENST00000523488 NR1I3Q14994 352 aa9.59□□□□□ -0.87
CSMD1-213ENST00000523488 KIF4BQ2VIQ3 1234 aa9.59□□□□□ -0.87
CSMD1-213ENST00000523488 DNAJC21Q5F1R6 531 aaKnown RBP9.59□□□□□ -0.87
CSMD1-213ENST00000523488 GBP3Q9H0R5 595 aa9.59□□□□□ -0.87
CSMD1-213ENST00000523488 PDE11AQ9HCR9 933 aa9.59□□□□□ -0.87
CSMD1-213ENST00000523488 A0A1B0GTH6 734 aa9.58□□□□□ -0.88
CSMD1-213ENST00000523488 H0YHG0 523 aa9.58□□□□□ -0.88
CSMD1-213ENST00000523488 CMA1P23946 247 aa9.58□□□□□ -0.88
CSMD1-213ENST00000523488 RDXP35241 583 aaKnown RBP9.58□□□□□ -0.88
CSMD1-213ENST00000523488 PLEKHO1Q53GL0 409 aaPredicted RBP9.58□□□□□ -0.88
CSMD1-213ENST00000523488 CDCA2Q69YH5 1023 aaPredicted RBP9.58□□□□□ -0.88
CSMD1-213ENST00000523488 CWC27Q6UX04 472 aaKnown RBP9.58□□□□□ -0.88
CSMD1-213ENST00000523488 CD302Q8IX05 232 aa9.58□□□□□ -0.88
CSMD1-213ENST00000523488 AENQ8WTP8 325 aaKnown RBP9.58□□□□□ -0.88
CSMD1-213ENST00000523488 FAM212AQ96EL1 285 aa9.58□□□□□ -0.88
CSMD1-213ENST00000523488 ZNF274Q96GC6 653 aaPredicted RBP9.58□□□□□ -0.88
CSMD1-213ENST00000523488 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.58□□□□□ -0.88
CSMD1-213ENST00000523488 RBM28Q9NW13 759 aaKnown RBP9.58□□□□□ -0.88
CSMD1-213ENST00000523488 TAF5LO75529 589 aa9.58□□□□□ -0.88
CSMD1-213ENST00000523488 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.58□□□□□ -0.88
CSMD1-213ENST00000523488 GNL3LQ9NVN8 582 aaKnown RBP9.58□□□□□ -0.88
CSMD1-213ENST00000523488 PPP6R2O75170 966 aa9.58□□□□□ -0.88
CSMD1-213ENST00000523488 ARHGAP25P42331 645 aa9.58□□□□□ -0.88
CSMD1-213ENST00000523488 TRAPPC11Q7Z392 1133 aa9.58□□□□□ -0.88
CSMD1-213ENST00000523488 MRPS27Q92552 414 aaKnown RBP9.58□□□□□ -0.88
CSMD1-213ENST00000523488 DHX58Q96C10 678 aa9.58□□□□□ -0.88
CSMD1-213ENST00000523488 IL1RAPL2Q9NP60 686 aa9.58□□□□□ -0.88
CSMD1-213ENST00000523488 SPG7Q9UQ90 795 aa9.58□□□□□ -0.88
CSMD1-213ENST00000523488 FAN1Q9Y2M0 1017 aa9.58□□□□□ -0.88
CSMD1-213ENST00000523488 PLEKHG3A1L390 1219 aa9.57□□□□□ -0.88
CSMD1-213ENST00000523488 ERLIN2O94905 339 aa9.57□□□□□ -0.88
CSMD1-213ENST00000523488 PAPD7Q5XG87 772 aaKnown RBP9.57□□□□□ -0.88
CSMD1-213ENST00000523488 CLIC6Q96NY7 704 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms