RNA–Protein interactions for RNA: ENST00000523125.5

VEGFA-223, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 541 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-223ENST00000523125 NEUROD6Q96NK8 337 aa15.31■□□□□ 0.04
VEGFA-223ENST00000523125 C1orf115Q9H7X2 142 aa15.31■□□□□ 0.04
VEGFA-223ENST00000523125 ELP3Q9H9T3 547 aa15.31■□□□□ 0.04
VEGFA-223ENST00000523125 TMOD2Q9NZR1 351 aa15.31■□□□□ 0.04
VEGFA-223ENST00000523125 DOCK2Q92608 1830 aa15.31■□□□□ 0.04
VEGFA-223ENST00000523125 IGF2BP3O00425 579 aaKnown RBP eCLIP15.3■□□□□ 0.04
VEGFA-223ENST00000523125 MAP3K9P80192 1104 aa15.3■□□□□ 0.04
VEGFA-223ENST00000523125 G3BP1Q13283 466 aaKnown RBP eCLIP15.3■□□□□ 0.04
VEGFA-223ENST00000523125 VGLL4Q14135 290 aa15.3■□□□□ 0.04
VEGFA-223ENST00000523125 ITPRIPQ8IWB1 547 aa15.3■□□□□ 0.04
VEGFA-223ENST00000523125 ZNF296Q8WUU4 475 aaPredicted RBP15.3■□□□□ 0.04
VEGFA-223ENST00000523125 CNKSR2Q8WXI2 1034 aa15.3■□□□□ 0.04
VEGFA-223ENST00000523125 RPAP1Q9BWH6 1393 aaPredicted RBP15.3■□□□□ 0.04
VEGFA-223ENST00000523125 GAKO14976 1311 aa15.29■□□□□ 0.04
VEGFA-223ENST00000523125 TESPA1A2RU30 521 aaPredicted RBP15.29■□□□□ 0.04
VEGFA-223ENST00000523125 GPR25O00155 361 aa15.29■□□□□ 0.04
VEGFA-223ENST00000523125 NFIAQ12857 509 aa15.29■□□□□ 0.04
VEGFA-223ENST00000523125 PI16Q6UXB8 463 aa15.29■□□□□ 0.04
VEGFA-223ENST00000523125 ZGPATQ8N5A5 531 aaKnown RBP15.29■□□□□ 0.04
VEGFA-223ENST00000523125 PANK1Q8TE04 598 aa15.29■□□□□ 0.04
VEGFA-223ENST00000523125 ZNF384Q8TF68 577 aa15.29■□□□□ 0.04
VEGFA-223ENST00000523125 FAM151AQ8WW52 585 aa15.29■□□□□ 0.04
VEGFA-223ENST00000523125 OPTNQ96CV9 577 aa15.29■□□□□ 0.04
VEGFA-223ENST00000523125 MS4A4AQ96JQ5 239 aa15.29■□□□□ 0.04
VEGFA-223ENST00000523125 PTPN18Q99952 460 aa15.29■□□□□ 0.04
VEGFA-223ENST00000523125 HMG20BQ9P0W2 317 aa15.29■□□□□ 0.04
VEGFA-223ENST00000523125 FAM198AQ9UFP1 575 aa15.29■□□□□ 0.04
VEGFA-223ENST00000523125 HTTP42858 3142 aa15.29■□□□□ 0.04
VEGFA-223ENST00000523125 TNRC18O15417 2968 aaPredicted RBP15.28■□□□□ 0.04
VEGFA-223ENST00000523125 CCDC85CA6NKD9 419 aa15.28■□□□□ 0.04
VEGFA-223ENST00000523125 ARID4AP29374 1257 aaPredicted RBP15.28■□□□□ 0.04
VEGFA-223ENST00000523125 TCP10Q12799 353 aa15.28■□□□□ 0.04
VEGFA-223ENST00000523125 FAM163AQ96GL9 167 aaPredicted RBP15.28■□□□□ 0.04
VEGFA-223ENST00000523125 USP40Q9NVE5 1235 aa15.28■□□□□ 0.04
VEGFA-223ENST00000523125 ABCF2Q9UG63 623 aa15.28■□□□□ 0.04
VEGFA-223ENST00000523125 NOP58Q9Y2X3 529 aaKnown RBP15.28■□□□□ 0.04
VEGFA-223ENST00000523125 CDK5RAP2Q96SN8 1893 aa15.28■□□□□ 0.04
VEGFA-223ENST00000523125 ALDH1A1P00352 501 aa15.27■□□□□ 0.04
VEGFA-223ENST00000523125 CTU1Q7Z7A3 348 aaKnown RBP15.27■□□□□ 0.04
VEGFA-223ENST00000523125 ZFPM1Q8IX07 1006 aa15.27■□□□□ 0.04
VEGFA-223ENST00000523125 SPATA5Q8NB90 893 aa15.27■□□□□ 0.04
VEGFA-223ENST00000523125 ZKSCAN4Q969J2 545 aaPredicted RBP15.27■□□□□ 0.04
VEGFA-223ENST00000523125 GPR108Q9NPR9 543 aa15.27■□□□□ 0.04
VEGFA-223ENST00000523125 SNCAIPQ9Y6H5 919 aa15.27■□□□□ 0.04
VEGFA-223ENST00000523125 RFX7Q2KHR2 1363 aa15.26■□□□□ 0.03
VEGFA-223ENST00000523125 SPDYE5A6NIY4 337 aa15.26■□□□□ 0.03
VEGFA-223ENST00000523125 SURF6O75683 361 aaKnown RBP15.26■□□□□ 0.03
VEGFA-223ENST00000523125 MCAMP43121 646 aa15.26■□□□□ 0.03
VEGFA-223ENST00000523125 MECOMQ03112 1051 aa15.26■□□□□ 0.03
VEGFA-223ENST00000523125 TNNI3KQ59H18 835 aa15.26■□□□□ 0.03
VEGFA-223ENST00000523125 GORABQ5T7V8 394 aa15.26■□□□□ 0.03
VEGFA-223ENST00000523125 SPTY2D1Q68D10 685 aaPredicted RBP15.26■□□□□ 0.03
VEGFA-223ENST00000523125 TBC1D9Q6ZT07 1266 aa15.26■□□□□ 0.03
VEGFA-223ENST00000523125 MIGA2Q7L4E1 593 aa15.26■□□□□ 0.03
VEGFA-223ENST00000523125 DZIP1Q86YF9 867 aaKnown RBP15.26■□□□□ 0.03
VEGFA-223ENST00000523125 HOOK2Q96ED9 719 aa15.26■□□□□ 0.03
VEGFA-223ENST00000523125 WRNIP1Q96S55 665 aa15.26■□□□□ 0.03
VEGFA-223ENST00000523125 IDI2Q9BXS1 227 aa15.26■□□□□ 0.03
VEGFA-223ENST00000523125 CSADQ9Y600 493 aa15.26■□□□□ 0.03
VEGFA-223ENST00000523125 FPGT-TNNI3KV9GXZ4 949 aa15.26■□□□□ 0.03
VEGFA-223ENST00000523125 MAST2Q6P0Q8 1798 aa15.26■□□□□ 0.03
VEGFA-223ENST00000523125 DCAF15Q66K64 600 aa15.25■□□□□ 0.03
VEGFA-223ENST00000523125 CEP85Q6P2H3 762 aa15.25■□□□□ 0.03
VEGFA-223ENST00000523125 ERICH6Q7L0X2 663 aa15.25■□□□□ 0.03
VEGFA-223ENST00000523125 BRI3BPQ8WY22 251 aa15.25■□□□□ 0.03
VEGFA-223ENST00000523125 OTUD5Q96G74 571 aa15.25■□□□□ 0.03
VEGFA-223ENST00000523125 DBNDD2Q9BQY9 259 aa15.25■□□□□ 0.03
VEGFA-223ENST00000523125 ZNF112Q9UJU3 913 aa15.25■□□□□ 0.03
VEGFA-223ENST00000523125 CENPFP49454 3210 aa15.25■□□□□ 0.03
VEGFA-223ENST00000523125 ATRNL1Q5VV63 1379 aa15.24■□□□□ 0.03
VEGFA-223ENST00000523125 FOCADQ5VW36 1801 aa15.24■□□□□ 0.03
VEGFA-223ENST00000523125 PHIPQ8WWQ0 1821 aa15.24■□□□□ 0.03
VEGFA-223ENST00000523125 MROH7-TTC4A0A0A0MT08 1334 aa15.24■□□□□ 0.03
VEGFA-223ENST00000523125 GPR75-ASB3A0A0A6YYF3 556 aa15.24■□□□□ 0.03
VEGFA-223ENST00000523125 FKTNO75072 461 aa15.24■□□□□ 0.03
VEGFA-223ENST00000523125 ENTPD3O75355 529 aa15.24■□□□□ 0.03
VEGFA-223ENST00000523125 WDHD1O75717 1129 aaPredicted RBP15.24■□□□□ 0.03
VEGFA-223ENST00000523125 UQCRFS1P1P0C7P4 283 aa15.24■□□□□ 0.03
VEGFA-223ENST00000523125 INPP5BP32019 993 aa15.24■□□□□ 0.03
VEGFA-223ENST00000523125 RGS3P49796 1198 aa15.24■□□□□ 0.03
VEGFA-223ENST00000523125 CRHR2Q13324 411 aa15.24■□□□□ 0.03
VEGFA-223ENST00000523125 ERO1BQ86YB8 467 aa15.24■□□□□ 0.03
VEGFA-223ENST00000523125 SLF2Q8IX21 1173 aa15.24■□□□□ 0.03
VEGFA-223ENST00000523125 NSUN4Q96CB9 384 aaKnown RBP15.24■□□□□ 0.03
VEGFA-223ENST00000523125 ZNF341Q9BYN7 854 aa15.24■□□□□ 0.03
VEGFA-223ENST00000523125 DDX4Q9NQI0 724 aaKnown RBP15.24■□□□□ 0.03
VEGFA-223ENST00000523125 PTPRFP10586 1907 aa15.23■□□□□ 0.03
VEGFA-223ENST00000523125 BTDP43251 543 aa15.23■□□□□ 0.03
VEGFA-223ENST00000523125 RGS19P49795 217 aa15.23■□□□□ 0.03
VEGFA-223ENST00000523125 GTF2A2P52657 109 aa15.23■□□□□ 0.03
VEGFA-223ENST00000523125 RHBDL3P58872 404 aa15.23■□□□□ 0.03
VEGFA-223ENST00000523125 OS9Q13438 667 aaPredicted RBP15.23■□□□□ 0.03
VEGFA-223ENST00000523125 SH3BP5LQ7L8J4 393 aa15.23■□□□□ 0.03
VEGFA-223ENST00000523125 DOCK1Q14185 1865 aa15.23■□□□□ 0.03
VEGFA-223ENST00000523125 CCL15-CCL14A0A0B4J2E2 113 aa15.22■□□□□ 0.03
VEGFA-223ENST00000523125 IRF6O14896 467 aa15.22■□□□□ 0.03
VEGFA-223ENST00000523125 MAP3K10Q02779 954 aa15.22■□□□□ 0.03
VEGFA-223ENST00000523125 PKN2Q16513 984 aaKnown RBP15.22■□□□□ 0.03
VEGFA-223ENST00000523125 CCL15Q16663 113 aa15.22■□□□□ 0.03
VEGFA-223ENST00000523125 OTUD7BQ6GQQ9 843 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms