RNA–Protein interactions for RNA: ENST00000522720.1

PABPC1-221, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 4

Gene PABPC1, Length 593 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-221ENST00000522720 CDC42EP5Q6NZY7 148 aa20.09■□□□□ 0.81
PABPC1-221ENST00000522720 TBC1D9Q6ZT07 1266 aa20.09■□□□□ 0.81
PABPC1-221ENST00000522720 AACSQ86V21 672 aa20.09■□□□□ 0.81
PABPC1-221ENST00000522720 AIDAQ96BJ3 306 aa20.09■□□□□ 0.81
PABPC1-221ENST00000522720 ZIC5Q96T25 663 aa20.09■□□□□ 0.81
PABPC1-221ENST00000522720 TMEM39BQ9GZU3 492 aa20.09■□□□□ 0.81
PABPC1-221ENST00000522720 IL1RAPL2Q9NP60 686 aa20.09■□□□□ 0.81
PABPC1-221ENST00000522720 APBB1O00213 710 aa20.08■□□□□ 0.81
PABPC1-221ENST00000522720 MECOMQ03112 1051 aa20.08■□□□□ 0.81
PABPC1-221ENST00000522720 RASAL3Q86YV0 1011 aa20.08■□□□□ 0.81
PABPC1-221ENST00000522720 CLASRPQ8N2M8 674 aaKnown RBP20.08■□□□□ 0.81
PABPC1-221ENST00000522720 SNRKQ9NRH2 765 aa20.08■□□□□ 0.81
PABPC1-221ENST00000522720 FZD1Q9UP38 647 aa20.08■□□□□ 0.81
PABPC1-221ENST00000522720 FOXN1O15353 648 aa20.07■□□□□ 0.8
PABPC1-221ENST00000522720 CDAN1Q8IWY9 1227 aa20.07■□□□□ 0.8
PABPC1-221ENST00000522720 ZNF384Q8TF68 577 aa20.07■□□□□ 0.8
PABPC1-221ENST00000522720 USP40Q9NVE5 1235 aa20.07■□□□□ 0.8
PABPC1-221ENST00000522720 UNCXA6NJT0 531 aa20.06■□□□□ 0.8
PABPC1-221ENST00000522720 USP2O75604 605 aaPredicted RBP20.06■□□□□ 0.8
PABPC1-221ENST00000522720 GSTO1P78417 241 aa20.06■□□□□ 0.8
PABPC1-221ENST00000522720 KIF23Q02241 960 aaPredicted RBP20.06■□□□□ 0.8
PABPC1-221ENST00000522720 FAM151AQ8WW52 585 aa20.06■□□□□ 0.8
PABPC1-221ENST00000522720 NSUN4Q96CB9 384 aaKnown RBP20.06■□□□□ 0.8
PABPC1-221ENST00000522720 BEGAINQ9BUH8 593 aa20.06■□□□□ 0.8
PABPC1-221ENST00000522720 RAI14Q9P0K7 980 aa20.06■□□□□ 0.8
PABPC1-221ENST00000522720 LRP2BPQ9P2M1 347 aa20.06■□□□□ 0.8
PABPC1-221ENST00000522720 MROH7-TTC4A0A0A0MT08 1334 aa20.05■□□□□ 0.8
PABPC1-221ENST00000522720 GPR75-ASB3A0A0A6YYF3 556 aa20.05■□□□□ 0.8
PABPC1-221ENST00000522720 CYP2E1P05181 493 aaPredicted RBP20.05■□□□□ 0.8
PABPC1-221ENST00000522720 LDHCP07864 332 aa20.05■□□□□ 0.8
PABPC1-221ENST00000522720 ZAP70P43403 619 aa20.05■□□□□ 0.8
PABPC1-221ENST00000522720 IGSF3O75054 1194 aa20.04■□□□□ 0.8
PABPC1-221ENST00000522720 IREB2P48200 963 aaKnown RBP20.04■□□□□ 0.8
PABPC1-221ENST00000522720 CTCFP49711 727 aaPredicted RBP20.04■□□□□ 0.8
PABPC1-221ENST00000522720 NFIAQ12857 509 aa20.04■□□□□ 0.8
PABPC1-221ENST00000522720 IFIT2P09913 472 aaKnown RBP20.03■□□□□ 0.8
PABPC1-221ENST00000522720 BTDP43251 543 aa20.03■□□□□ 0.8
PABPC1-221ENST00000522720 REM2Q8IYK8 340 aaPredicted RBP20.03■□□□□ 0.8
PABPC1-221ENST00000522720 HOOK2Q96ED9 719 aa20.03■□□□□ 0.8
PABPC1-221ENST00000522720 SLC10A4Q96EP9 437 aa20.03■□□□□ 0.8
PABPC1-221ENST00000522720 CSRNP1Q96S65 589 aa20.03■□□□□ 0.8
PABPC1-221ENST00000522720 CRBNQ96SW2 442 aa20.03■□□□□ 0.8
PABPC1-221ENST00000522720 IDI2Q9BXS1 227 aa20.03■□□□□ 0.8
PABPC1-221ENST00000522720 FAM198AQ9UFP1 575 aa20.03■□□□□ 0.8
PABPC1-221ENST00000522720 PCDHB15Q9Y5E8 787 aa20.03■□□□□ 0.8
PABPC1-221ENST00000522720 RPAP1Q9BWH6 1393 aaPredicted RBP20.03■□□□□ 0.8
PABPC1-221ENST00000522720 MYO5AQ9Y4I1 1855 aaKnown RBP20.03■□□□□ 0.8
PABPC1-221ENST00000522720 AK9Q5TCS8 1911 aa20.02■□□□□ 0.8
PABPC1-221ENST00000522720 CA12O43570 354 aa20.02■□□□□ 0.8
PABPC1-221ENST00000522720 TCP10Q12799 353 aa20.02■□□□□ 0.8
PABPC1-221ENST00000522720 CLMNQ96JQ2 1002 aa20.02■□□□□ 0.8
PABPC1-221ENST00000522720 DCTPP1Q9H773 170 aa20.02■□□□□ 0.8
PABPC1-221ENST00000522720 RHBDL3P58872 404 aa20.01■□□□□ 0.79
PABPC1-221ENST00000522720 ANKRD13AQ8IZ07 590 aa20.01■□□□□ 0.79
PABPC1-221ENST00000522720 LRRCC1Q9C099 1032 aa20.01■□□□□ 0.79
PABPC1-221ENST00000522720 PIH1D3Q9NQM4 214 aaKnown RBP20.01■□□□□ 0.79
PABPC1-221ENST00000522720 ENTPD3O75355 529 aa20■□□□□ 0.79
PABPC1-221ENST00000522720 WDHD1O75717 1129 aaPredicted RBP20■□□□□ 0.79
PABPC1-221ENST00000522720 MAP4K4O95819 1239 aaPredicted RBP20■□□□□ 0.79
PABPC1-221ENST00000522720 HSPA8P11142 646 aaKnown RBP20■□□□□ 0.79
PABPC1-221ENST00000522720 SPRYD7Q5W111 196 aa20■□□□□ 0.79
PABPC1-221ENST00000522720 NAA16Q6N069 864 aaPredicted RBP20■□□□□ 0.79
PABPC1-221ENST00000522720 ZFPM1Q8IX07 1006 aa20■□□□□ 0.79
PABPC1-221ENST00000522720 BCL11AQ9H165 835 aa20■□□□□ 0.79
PABPC1-221ENST00000522720 PRDM10Q9NQV6 1147 aa20■□□□□ 0.79
PABPC1-221ENST00000522720 RFX7Q2KHR2 1363 aa19.99■□□□□ 0.79
PABPC1-221ENST00000522720 RGS3P49796 1198 aa19.99■□□□□ 0.79
PABPC1-221ENST00000522720 LBX1P52954 281 aa19.99■□□□□ 0.79
PABPC1-221ENST00000522720 MAP3K9P80192 1104 aa19.99■□□□□ 0.79
PABPC1-221ENST00000522720 COL13A1Q5TAT6 717 aaPredicted RBP19.99■□□□□ 0.79
PABPC1-221ENST00000522720 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.99■□□□□ 0.79
PABPC1-221ENST00000522720 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.99■□□□□ 0.791e-323■■■□□ 15.3
PABPC1-221ENST00000522720 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.99■□□□□ 0.79
PABPC1-221ENST00000522720 SMARCA5O60264 1052 aaPredicted RBP19.98■□□□□ 0.79
PABPC1-221ENST00000522720 NPM3O75607 178 aaKnown RBP19.98■□□□□ 0.79
PABPC1-221ENST00000522720 DCAF15Q66K64 600 aa19.98■□□□□ 0.79
PABPC1-221ENST00000522720 ANTXR1Q9H6X2 564 aa19.98■□□□□ 0.79
PABPC1-221ENST00000522720 NDUFB9Q9Y6M9 179 aa19.98■□□□□ 0.79
PABPC1-221ENST00000522720 OTOFQ9HC10 1997 aa19.97■□□□□ 0.79
PABPC1-221ENST00000522720 IDH1O75874 414 aaKnown RBP19.97■□□□□ 0.79
PABPC1-221ENST00000522720 ZBTB48P10074 688 aaPredicted RBP19.97■□□□□ 0.79
PABPC1-221ENST00000522720 TM4SF4P48230 202 aa19.97■□□□□ 0.79
PABPC1-221ENST00000522720 PPP4CP60510 307 aa19.97■□□□□ 0.79
PABPC1-221ENST00000522720 MKRN3Q13064 507 aaKnown RBP19.97■□□□□ 0.79
PABPC1-221ENST00000522720 MIGA2Q7L4E1 593 aa19.97■□□□□ 0.79
PABPC1-221ENST00000522720 WNK4Q96J92 1243 aa19.97■□□□□ 0.79
PABPC1-221ENST00000522720 NOL10Q9BSC4 688 aaKnown RBP19.97■□□□□ 0.79
PABPC1-221ENST00000522720 DDX4Q9NQI0 724 aaKnown RBP19.97■□□□□ 0.79
PABPC1-221ENST00000522720 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.97■□□□□ 0.79
PABPC1-221ENST00000522720 MAST2Q6P0Q8 1798 aa19.97■□□□□ 0.79
PABPC1-221ENST00000522720 BAG3O95817 575 aa19.96■□□□□ 0.79
PABPC1-221ENST00000522720 ATP5JP18859 108 aa19.96■□□□□ 0.79
PABPC1-221ENST00000522720 AAMPQ13685 434 aa19.96■□□□□ 0.79
PABPC1-221ENST00000522720 VGLL4Q14135 290 aa19.96■□□□□ 0.79
PABPC1-221ENST00000522720 SH3BP5LQ7L8J4 393 aa19.96■□□□□ 0.79
PABPC1-221ENST00000522720 ZNF341Q9BYN7 854 aa19.96■□□□□ 0.79
PABPC1-221ENST00000522720 RNF186Q9NXI6 227 aa19.96■□□□□ 0.79
PABPC1-221ENST00000522720 SAGE1Q9NXZ1 904 aa19.96■□□□□ 0.79
PABPC1-221ENST00000522720 TSKSQ9UJT2 592 aa19.96■□□□□ 0.79
PABPC1-221ENST00000522720 CSADQ9Y600 493 aa19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms