RNA–Protein interactions for RNA: ENST00000522552.5

SKP1-209, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SKP1, Length 1,683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-209ENST00000522552 IL2RAP01589 272 aa5.09□□□□□ -1.59
SKP1-209ENST00000522552 IFIT2P09913 472 aaKnown RBP5.09□□□□□ -1.59
SKP1-209ENST00000522552 GOLGA6DP0CG33 693 aa5.09□□□□□ -1.59
SKP1-209ENST00000522552 ZEB1P37275 1124 aaPredicted RBP5.09□□□□□ -1.59
SKP1-209ENST00000522552 TRAPPC10P48553 1259 aa5.09□□□□□ -1.59
SKP1-209ENST00000522552 PDE12Q6L8Q7 609 aaKnown RBP5.09□□□□□ -1.59
SKP1-209ENST00000522552 SV2BQ7L1I2 683 aa5.09□□□□□ -1.59
SKP1-209ENST00000522552 VASH1Q7L8A9 365 aaPredicted RBP5.09□□□□□ -1.59
SKP1-209ENST00000522552 STRA8Q7Z7C7 330 aa5.09□□□□□ -1.59
SKP1-209ENST00000522552 CACTIN-AS1Q8N1I8 211 aa5.09□□□□□ -1.59
SKP1-209ENST00000522552 MAGEB6Q8N7X4 407 aa5.09□□□□□ -1.59
SKP1-209ENST00000522552 ZNF784Q8NCA9 323 aaPredicted RBP5.09□□□□□ -1.59
SKP1-209ENST00000522552 FBXO27Q8NI29 283 aa5.09□□□□□ -1.59
SKP1-209ENST00000522552 CHRDQ9H2X0 955 aa5.09□□□□□ -1.59
SKP1-209ENST00000522552 ARHGEF10LQ9HCE6 1279 aa5.09□□□□□ -1.59
SKP1-209ENST00000522552 GOLGA6AQ9NYA3 693 aa5.09□□□□□ -1.59
SKP1-209ENST00000522552 TMEM63CQ9P1W3 806 aa5.09□□□□□ -1.59
SKP1-209ENST00000522552 PPM1HQ9ULR3 514 aa5.09□□□□□ -1.59
SKP1-209ENST00000522552 MAPRE3Q9UPY8 281 aa5.09□□□□□ -1.59
SKP1-209ENST00000522552 DAAM1Q9Y4D1 1078 aa5.09□□□□□ -1.59
SKP1-209ENST00000522552 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.08□□□□□ -1.6
SKP1-209ENST00000522552 EREGO14944 169 aa5.08□□□□□ -1.6
SKP1-209ENST00000522552 TLR3O15455 904 aaKnown RBP5.08□□□□□ -1.6
SKP1-209ENST00000522552 RFPL3O75679 317 aa5.08□□□□□ -1.6
SKP1-209ENST00000522552 DGAT1O75907 488 aa5.08□□□□□ -1.6
SKP1-209ENST00000522552 MCM4P33991 863 aa5.08□□□□□ -1.6
SKP1-209ENST00000522552 CASP7P55210 303 aa5.08□□□□□ -1.6
SKP1-209ENST00000522552 FCGRTP55899 365 aa5.08□□□□□ -1.6
SKP1-209ENST00000522552 TRIP4Q15650 581 aaPredicted RBP5.08□□□□□ -1.6
SKP1-209ENST00000522552 GFOD2Q3B7J2 385 aa5.08□□□□□ -1.6
SKP1-209ENST00000522552 FAM83BQ5T0W9 1011 aa5.08□□□□□ -1.6
SKP1-209ENST00000522552 IL31Q6EBC2 164 aa5.08□□□□□ -1.6
SKP1-209ENST00000522552 MRM1Q6IN84 353 aaKnown RBP5.08□□□□□ -1.6
SKP1-209ENST00000522552 KANK3Q6NY19 840 aa5.08□□□□□ -1.6
SKP1-209ENST00000522552 C6orf15Q6UXA7 325 aaPredicted RBP5.08□□□□□ -1.6
SKP1-209ENST00000522552 NBPF15Q8N660 670 aa5.08□□□□□ -1.6
SKP1-209ENST00000522552 ZNF669Q96BR6 464 aaPredicted RBP5.08□□□□□ -1.6
SKP1-209ENST00000522552 MTMR8Q96EF0 704 aa5.08□□□□□ -1.6
SKP1-209ENST00000522552 XAGE2Q96GT9 111 aa5.08□□□□□ -1.6
SKP1-209ENST00000522552 TARS2Q9BW92 718 aaKnown RBP5.08□□□□□ -1.6
SKP1-209ENST00000522552 ELP3Q9H9T3 547 aa5.08□□□□□ -1.6
SKP1-209ENST00000522552 AS3MTQ9HBK9 375 aa5.08□□□□□ -1.6
SKP1-209ENST00000522552 AASDHPPTQ9NRN7 309 aa5.08□□□□□ -1.6
SKP1-209ENST00000522552 CABP1Q9NZU7 370 aa5.08□□□□□ -1.6
SKP1-209ENST00000522552 ANKIB1Q9P2G1 1089 aa5.08□□□□□ -1.6
SKP1-209ENST00000522552 USP20Q9Y2K6 914 aa5.08□□□□□ -1.6
SKP1-209ENST00000522552 MAP4K5Q9Y4K4 846 aa5.08□□□□□ -1.6
SKP1-209ENST00000522552 E2F8A0AVK6 867 aa5.08□□□□□ -1.6
SKP1-209ENST00000522552 LILRA1O75019 489 aa5.08□□□□□ -1.6
SKP1-209ENST00000522552 LDHCP07864 332 aa5.08□□□□□ -1.6
SKP1-209ENST00000522552 CELA3AP09093 270 aa5.08□□□□□ -1.6
SKP1-209ENST00000522552 TFE3P19532 575 aaPredicted RBP5.08□□□□□ -1.6
SKP1-209ENST00000522552 PURAQ00577 322 aaKnown RBP5.08□□□□□ -1.6
SKP1-209ENST00000522552 ITKQ08881 620 aa5.08□□□□□ -1.6
SKP1-209ENST00000522552 PPP2R5EQ16537 467 aa5.08□□□□□ -1.6
SKP1-209ENST00000522552 NECAB2Q7Z6G3 386 aa5.08□□□□□ -1.6
SKP1-209ENST00000522552 LSRQ86X29 649 aaPredicted RBP5.08□□□□□ -1.6
SKP1-209ENST00000522552 PDILTQ8N807 584 aa5.08□□□□□ -1.6
SKP1-209ENST00000522552 LRRC3Q9BY71 257 aa5.08□□□□□ -1.6
SKP1-209ENST00000522552 CCDC8Q9H0W5 538 aaPredicted RBP5.08□□□□□ -1.6
SKP1-209ENST00000522552 PPP4R2Q9NY27 417 aa5.08□□□□□ -1.6
SKP1-209ENST00000522552 ZNF180Q9UJW8 692 aa5.08□□□□□ -1.6
SKP1-209ENST00000522552 ZNRF3Q9ULT6 936 aa5.08□□□□□ -1.6
SKP1-209ENST00000522552 TRAK1Q9UPV9 953 aa5.08□□□□□ -1.6
SKP1-209ENST00000522552 PHLDB1Q86UU1 1377 aa5.07□□□□□ -1.6
SKP1-209ENST00000522552 ADCY3O60266 1144 aa5.07□□□□□ -1.6
SKP1-209ENST00000522552 MYL3P08590 195 aa5.07□□□□□ -1.6
SKP1-209ENST00000522552 MCCP23508 829 aa5.07□□□□□ -1.6
SKP1-209ENST00000522552 FSHRP23945 695 aa5.07□□□□□ -1.6
SKP1-209ENST00000522552 NEK3P51956 506 aa5.07□□□□□ -1.6
SKP1-209ENST00000522552 NNTQ13423 1086 aa5.07□□□□□ -1.6
SKP1-209ENST00000522552 SIM2Q14190 667 aaPredicted RBP5.07□□□□□ -1.6
SKP1-209ENST00000522552 MYBPC2Q14324 1141 aa5.07□□□□□ -1.6
SKP1-209ENST00000522552 LHFPL2Q6ZUX7 228 aa5.07□□□□□ -1.6
SKP1-209ENST00000522552 PASD1Q8IV76 773 aa5.07□□□□□ -1.6
SKP1-209ENST00000522552 C1orf131Q8NDD1 294 aaKnown RBP5.07□□□□□ -1.6
SKP1-209ENST00000522552 CHMP4CQ96CF2 233 aa5.07□□□□□ -1.6
SKP1-209ENST00000522552 NEUROD6Q96NK8 337 aa5.07□□□□□ -1.6
SKP1-209ENST00000522552 CAMKK2Q96RR4 588 aa5.07□□□□□ -1.6
SKP1-209ENST00000522552 YIPF4Q9BSR8 244 aa5.07□□□□□ -1.6
SKP1-209ENST00000522552 OXCT2Q9BYC2 517 aaPredicted RBP5.07□□□□□ -1.6
SKP1-209ENST00000522552 EHD4Q9H223 541 aa5.07□□□□□ -1.6
SKP1-209ENST00000522552 SLC5A4Q9NY91 659 aa5.07□□□□□ -1.6
SKP1-209ENST00000522552 AKAP2Q9Y2D5 859 aa5.07□□□□□ -1.6
SKP1-209ENST00000522552 FNDC3AQ9Y2H6 1198 aaKnown RBP5.07□□□□□ -1.6
SKP1-209ENST00000522552 HRH3Q9Y5N1 445 aa5.07□□□□□ -1.6
SKP1-209ENST00000522552 PPP2R3BQ9Y5P8 575 aa5.07□□□□□ -1.6
SKP1-209ENST00000522552 ROBO2Q9HCK4 1378 aa5.07□□□□□ -1.6
SKP1-209ENST00000522552 VSTM5A8MXK1 200 aa5.06□□□□□ -1.6
SKP1-209ENST00000522552 UBAP1LF5GYI3 381 aa5.06□□□□□ -1.6
SKP1-209ENST00000522552 TCEA3O75764 348 aa5.06□□□□□ -1.6
SKP1-209ENST00000522552 ADH1CP00326 375 aa5.06□□□□□ -1.6
SKP1-209ENST00000522552 F13A1P00488 732 aa5.06□□□□□ -1.6
SKP1-209ENST00000522552 NR3C2P08235 984 aa5.06□□□□□ -1.6
SKP1-209ENST00000522552 TRIM27P14373 513 aa5.06□□□□□ -1.6
SKP1-209ENST00000522552 RASSF7Q02833 373 aa5.06□□□□□ -1.6
SKP1-209ENST00000522552 SETDB1Q15047 1291 aa5.06□□□□□ -1.6
SKP1-209ENST00000522552 LONRF2Q1L5Z9 754 aa5.06□□□□□ -1.6
SKP1-209ENST00000522552 KIAA0319Q5VV43 1072 aa5.06□□□□□ -1.6
SKP1-209ENST00000522552 TPTE2Q6XPS3 522 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms