RNA–Protein interactions for RNA: ENST00000518385.5

SDC2-202, Transcript of syndecan 2, humanhuman

TSL 5 BASIC

Gene SDC2, Length 1,583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-202ENST00000518385 ZMYM6O95789 1325 aa21.39■■□□□ 1.01
SDC2-202ENST00000518385 DOCK2Q92608 1830 aa21.39■■□□□ 1.01
SDC2-202ENST00000518385 IDH1O75874 414 aaKnown RBP21.39■■□□□ 1.01
SDC2-202ENST00000518385 RASGRF1Q13972 1273 aa21.39■■□□□ 1.01
SDC2-202ENST00000518385 ALX1Q15699 326 aa21.39■■□□□ 1.01
SDC2-202ENST00000518385 SLFNL1Q499Z3 407 aa21.39■■□□□ 1.01
SDC2-202ENST00000518385 RBM43Q6ZSC3 357 aaKnown RBP21.39■■□□□ 1.01
SDC2-202ENST00000518385 TMC4Q7Z404 712 aa21.39■■□□□ 1.01
SDC2-202ENST00000518385 WDR19Q8NEZ3 1342 aa21.38■■□□□ 1.01
SDC2-202ENST00000518385 TCRBV5S4A2TA0A5A2 114 aa21.38■■□□□ 1.01
SDC2-202ENST00000518385 WTIPA6NIX2 430 aaPredicted RBP21.38■■□□□ 1.01
SDC2-202ENST00000518385 FGAP02671 866 aa21.38■■□□□ 1.01
SDC2-202ENST00000518385 Q6ZUG5 572 aa21.38■■□□□ 1.01
SDC2-202ENST00000518385 STOX1Q6ZVD7 989 aa21.38■■□□□ 1.01
SDC2-202ENST00000518385 MASTLQ96GX5 879 aa21.38■■□□□ 1.01
SDC2-202ENST00000518385 SEMA3EO15041 775 aa21.37■■□□□ 1.01
SDC2-202ENST00000518385 CDC25BP30305 580 aa21.37■■□□□ 1.01
SDC2-202ENST00000518385 ALDH1B1P30837 517 aa21.37■■□□□ 1.01
SDC2-202ENST00000518385 BCAMP50895 628 aa21.37■■□□□ 1.01
SDC2-202ENST00000518385 TMED8Q6PL24 325 aaPredicted RBP21.37■■□□□ 1.01
SDC2-202ENST00000518385 LARP6Q9BRS8 491 aaKnown RBP21.37■■□□□ 1.01
SDC2-202ENST00000518385 LLPHQ9BRT6 129 aaKnown RBP21.37■■□□□ 1.01
SDC2-202ENST00000518385 PRDM4Q9UKN5 801 aa21.37■■□□□ 1.01
SDC2-202ENST00000518385 LEMD3Q9Y2U8 911 aa21.37■■□□□ 1.01
SDC2-202ENST00000518385 ZNF532Q9HCE3 1301 aa21.37■■□□□ 1.01
SDC2-202ENST00000518385 CTIFO43310 598 aaKnown RBP21.36■■□□□ 1.01
SDC2-202ENST00000518385 NEMFO60524 1076 aa21.36■■□□□ 1.01
SDC2-202ENST00000518385 IGSF3O75054 1194 aa21.36■■□□□ 1.01
SDC2-202ENST00000518385 FGD1P98174 961 aa21.36■■□□□ 1.01
SDC2-202ENST00000518385 CAVIN4Q5BKX8 364 aa21.36■■□□□ 1.01
SDC2-202ENST00000518385 PDCL2Q8N4E4 241 aa21.36■■□□□ 1.01
SDC2-202ENST00000518385 FEZ1Q99689 392 aa21.36■■□□□ 1.01
SDC2-202ENST00000518385 TTC12Q9H892 705 aaPredicted RBP21.36■■□□□ 1.01
SDC2-202ENST00000518385 ZNF213O14771 459 aa21.36■■□□□ 1.01
SDC2-202ENST00000518385 FOXP2O15409 715 aa21.36■■□□□ 1.01
SDC2-202ENST00000518385 GNAT2P19087 354 aa21.36■■□□□ 1.01
SDC2-202ENST00000518385 DNM1Q05193 864 aaKnown RBP21.36■■□□□ 1.01
SDC2-202ENST00000518385 ST3GAL1Q11201 340 aa21.36■■□□□ 1.01
SDC2-202ENST00000518385 C2CD5Q86YS7 1000 aa21.36■■□□□ 1.01
SDC2-202ENST00000518385 SP8Q8IXZ3 490 aa21.36■■□□□ 1.01
SDC2-202ENST00000518385 GTF3C6Q969F1 213 aa21.36■■□□□ 1.01
SDC2-202ENST00000518385 ANKIB1Q9P2G1 1089 aa21.36■■□□□ 1.01
SDC2-202ENST00000518385 XDHP47989 1333 aa21.35■■□□□ 1.01
SDC2-202ENST00000518385 PDS5AQ29RF7 1337 aaKnown RBP21.35■■□□□ 1.01
SDC2-202ENST00000518385 LAMA4Q16363 1823 aa21.35■■□□□ 1.01
SDC2-202ENST00000518385 H0YIN7 160 aa21.35■■□□□ 1.01
SDC2-202ENST00000518385 DMTNQ08495 405 aa21.35■■□□□ 1.01
SDC2-202ENST00000518385 STYK1Q6J9G0 422 aa21.35■■□□□ 1.01
SDC2-202ENST00000518385 ZNF274Q96GC6 653 aaPredicted RBP21.35■■□□□ 1.01
SDC2-202ENST00000518385 FAM84BQ96KN1 310 aaPredicted RBP21.35■■□□□ 1.01
SDC2-202ENST00000518385 PFKFB2O60825 505 aa21.34■■□□□ 1.01
SDC2-202ENST00000518385 EVCP57679 992 aa21.34■■□□□ 1.01
SDC2-202ENST00000518385 GPSM2P81274 684 aa21.34■■□□□ 1.01
SDC2-202ENST00000518385 LARP1BQ659C4 914 aaKnown RBP21.34■■□□□ 1.01
SDC2-202ENST00000518385 GIMAP6Q6P9H5 292 aa21.34■■□□□ 1.01
SDC2-202ENST00000518385 FBXO33Q7Z6M2 555 aa21.34■■□□□ 1.01
SDC2-202ENST00000518385 NECAB1Q8N987 351 aa21.34■■□□□ 1.01
SDC2-202ENST00000518385 ANKRD7Q92527 254 aa21.34■■□□□ 1.01
SDC2-202ENST00000518385 AIDAQ96BJ3 306 aa21.34■■□□□ 1.01
SDC2-202ENST00000518385 STRBPQ96SI9 672 aaKnown RBP21.34■■□□□ 1.01
SDC2-202ENST00000518385 DENND2AQ9ULE3 1009 aa21.34■■□□□ 1.01
SDC2-202ENST00000518385 PATL2C9JE40 543 aaKnown RBP21.33■■□□□ 1.01
SDC2-202ENST00000518385 PPEF1O14829 653 aaPredicted RBP21.33■■□□□ 1.01
SDC2-202ENST00000518385 GYG1P46976 350 aa21.33■■□□□ 1.01
SDC2-202ENST00000518385 SLC51AQ86UW1 340 aa21.33■■□□□ 1.01
SDC2-202ENST00000518385 TDRD7Q8NHU6 1098 aaKnown RBP21.33■■□□□ 1.01
SDC2-202ENST00000518385 NCOA7Q8NI08 942 aa21.33■■□□□ 1.01
SDC2-202ENST00000518385 TCEANC2Q96MN5 208 aa21.33■■□□□ 1.01
SDC2-202ENST00000518385 PODXL2Q9NZ53 605 aa21.33■■□□□ 1.01
SDC2-202ENST00000518385 WWC3Q9ULE0 1092 aa21.33■■□□□ 1.01
SDC2-202ENST00000518385 ATP6V0A2Q9Y487 856 aa21.33■■□□□ 1.01
SDC2-202ENST00000518385 PAXBP1Q9Y5B6 917 aa21.33■■□□□ 1.01
SDC2-202ENST00000518385 IRS2Q9Y4H2 1338 aa21.33■■□□□ 1
SDC2-202ENST00000518385 COL11A2P13942 1736 aaPredicted RBP21.33■■□□□ 1
SDC2-202ENST00000518385 CTAGE5O15320 804 aa21.32■■□□□ 1
SDC2-202ENST00000518385 ATP2B4P23634 1241 aa21.32■■□□□ 1
SDC2-202ENST00000518385 TYRO3Q06418 890 aa21.32■■□□□ 1
SDC2-202ENST00000518385 DHX8Q14562 1220 aaKnown RBP21.32■■□□□ 1
SDC2-202ENST00000518385 BRF1Q92994 677 aa21.32■■□□□ 1
SDC2-202ENST00000518385 GOLGA6L4A6NEF3 574 aa21.31■■□□□ 1
SDC2-202ENST00000518385 COL9A3Q14050 684 aaPredicted RBP21.31■■□□□ 1
SDC2-202ENST00000518385 R3HDM1Q15032 1099 aaKnown RBP21.31■■□□□ 1
SDC2-202ENST00000518385 ATL3Q6DD88 541 aa21.31■■□□□ 1
SDC2-202ENST00000518385 TTLL5Q6EMB2 1281 aa21.31■■□□□ 1
SDC2-202ENST00000518385 C15orf52Q6ZUT6 534 aaKnown RBP21.31■■□□□ 1
SDC2-202ENST00000518385 ZNF710Q8N1W2 664 aa21.31■■□□□ 1
SDC2-202ENST00000518385 MAGEB6Q8N7X4 407 aa21.31■■□□□ 1
SDC2-202ENST00000518385 ZNF622Q969S3 477 aaKnown RBP eCLIP21.31■■□□□ 1
SDC2-202ENST00000518385 CLSTN2Q9H4D0 955 aa21.31■■□□□ 1
SDC2-202ENST00000518385 VPS37CA5D8V6 355 aaPredicted RBP21.31■■□□□ 1
SDC2-202ENST00000518385 SMTNL1A8MU46 457 aa21.31■■□□□ 1
SDC2-202ENST00000518385 KLRK1P26718 216 aa21.31■■□□□ 1
SDC2-202ENST00000518385 TRDNQ13061 729 aa21.31■■□□□ 1
SDC2-202ENST00000518385 FOXD4L6Q3SYB3 417 aaPredicted RBP21.31■■□□□ 1
SDC2-202ENST00000518385 FOXD4L3Q6VB84 417 aaPredicted RBP21.31■■□□□ 1
SDC2-202ENST00000518385 RALYLQ86SE5 291 aaKnown RBP21.31■■□□□ 1
SDC2-202ENST00000518385 MTFR1LQ9H019 292 aa21.31■■□□□ 1
SDC2-202ENST00000518385 TNMDQ9H2S6 317 aa21.31■■□□□ 1
SDC2-202ENST00000518385 ZSCAN16Q9H4T2 348 aaPredicted RBP21.31■■□□□ 1
SDC2-202ENST00000518385 C10orf71Q711Q0 1435 aa21.3■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms