RNA–Protein interactions for RNA: ENST00000517525.1

PVT1-204, Transcript of Pvt1 oncogene, humanhuman

TSL 3

Gene PVT1, Length 392 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-204ENST00000517525 HMMRO75330 724 aa30.27■■■□□ 2.44
PVT1-204ENST00000517525 MCAMP43121 646 aa30.27■■■□□ 2.44
PVT1-204ENST00000517525 CCDC158Q5M9N0 1113 aa30.27■■■□□ 2.44
PVT1-204ENST00000517525 C20orf194Q5TEA3 1177 aa30.27■■■□□ 2.44
PVT1-204ENST00000517525 SIRT2Q8IXJ6 389 aa30.27■■■□□ 2.44
PVT1-204ENST00000517525 ABCF2Q9UG63 623 aa30.27■■■□□ 2.44
PVT1-204ENST00000517525 CACNB3P54284 484 aa30.26■■■□□ 2.43
PVT1-204ENST00000517525 ERICH6Q7L0X2 663 aa30.26■■■□□ 2.43
PVT1-204ENST00000517525 HOOK2Q96ED9 719 aa30.26■■■□□ 2.43
PVT1-204ENST00000517525 TM4SF4P48230 202 aa30.25■■■□□ 2.43
PVT1-204ENST00000517525 SPRYD7Q5W111 196 aa30.25■■■□□ 2.43
PVT1-204ENST00000517525 DZIP1Q86YF9 867 aaKnown RBP30.25■■■□□ 2.43
PVT1-204ENST00000517525 CDAN1Q8IWY9 1227 aa30.25■■■□□ 2.43
PVT1-204ENST00000517525 ANKRD13AQ8IZ07 590 aa30.25■■■□□ 2.43
PVT1-204ENST00000517525 FAM151AQ8WW52 585 aa30.25■■■□□ 2.43
PVT1-204ENST00000517525 EAF2Q96CJ1 260 aaPredicted RBP30.25■■■□□ 2.43
PVT1-204ENST00000517525 SLC10A4Q96EP9 437 aa30.25■■■□□ 2.43
PVT1-204ENST00000517525 DBNLQ9UJU6 430 aaKnown RBP30.25■■■□□ 2.43
PVT1-204ENST00000517525 FZD1Q9UP38 647 aa30.25■■■□□ 2.43
PVT1-204ENST00000517525 EXOC6BQ9Y2D4 811 aa30.24■■■□□ 2.43
PVT1-204ENST00000517525 CAPN15O75808 1086 aa30.23■■■□□ 2.43
PVT1-204ENST00000517525 ZBTB48P10074 688 aaPredicted RBP30.23■■■□□ 2.43
PVT1-204ENST00000517525 TTC39AQ5SRH9 613 aa30.23■■■□□ 2.43
PVT1-204ENST00000517525 PI16Q6UXB8 463 aa30.23■■■□□ 2.43
PVT1-204ENST00000517525 TNS4Q8IZW8 715 aa30.23■■■□□ 2.43
PVT1-204ENST00000517525 IDI2Q9BXS1 227 aa30.23■■■□□ 2.43
PVT1-204ENST00000517525 USP40Q9NVE5 1235 aa30.23■■■□□ 2.43
PVT1-204ENST00000517525 MAP4K4O95819 1239 aaPredicted RBP30.22■■■□□ 2.43
PVT1-204ENST00000517525 MECOMQ03112 1051 aa30.22■■■□□ 2.43
PVT1-204ENST00000517525 ZNF384Q8TF68 577 aa30.22■■■□□ 2.43
PVT1-204ENST00000517525 RNF186Q9NXI6 227 aa30.22■■■□□ 2.43
PVT1-204ENST00000517525 MROH7-TTC4A0A0A0MT08 1334 aa30.22■■■□□ 2.43
PVT1-204ENST00000517525 GPR75-ASB3A0A0A6YYF3 556 aa30.21■■■□□ 2.43
PVT1-204ENST00000517525 GSTO1P78417 241 aa30.21■■■□□ 2.43
PVT1-204ENST00000517525 RHPN1Q8TCX5 695 aa30.21■■■□□ 2.43
PVT1-204ENST00000517525 NSUN4Q96CB9 384 aaKnown RBP30.21■■■□□ 2.43
PVT1-204ENST00000517525 CLMNQ96JQ2 1002 aa30.21■■■□□ 2.43
PVT1-204ENST00000517525 RAB11FIP3O75154 756 aa30.2■■■□□ 2.43
PVT1-204ENST00000517525 LDHCP07864 332 aa30.2■■■□□ 2.43
PVT1-204ENST00000517525 MAP3K9P80192 1104 aa30.2■■■□□ 2.43
PVT1-204ENST00000517525 DDX55Q8NHQ9 600 aaKnown RBP eCLIP30.2■■■□□ 2.43
PVT1-204ENST00000517525 FAM198AQ9UFP1 575 aa30.2■■■□□ 2.43
PVT1-204ENST00000517525 RFX7Q2KHR2 1363 aa30.19■■■□□ 2.42
PVT1-204ENST00000517525 ENTPD3O75355 529 aa30.19■■■□□ 2.42
PVT1-204ENST00000517525 NPM3O75607 178 aaKnown RBP30.19■■■□□ 2.42
PVT1-204ENST00000517525 INHBEP58166 350 aa30.19■■■□□ 2.42
PVT1-204ENST00000517525 SREBF2Q12772 1141 aa30.19■■■□□ 2.42
PVT1-204ENST00000517525 NFIAQ12857 509 aa30.19■■■□□ 2.42
PVT1-204ENST00000517525 PPP1R3FQ6ZSY5 799 aaPredicted RBP30.19■■■□□ 2.42
PVT1-204ENST00000517525 TBC1D9Q6ZT07 1266 aa30.19■■■□□ 2.42
PVT1-204ENST00000517525 KIF1BPQ96EK5 621 aa30.19■■■□□ 2.42
PVT1-204ENST00000517525 WNK4Q96J92 1243 aa30.19■■■□□ 2.42
PVT1-204ENST00000517525 DCAF15Q66K64 600 aa30.18■■■□□ 2.42
PVT1-204ENST00000517525 CCDC8Q9H0W5 538 aaPredicted RBP30.18■■■□□ 2.42
PVT1-204ENST00000517525 TLR7Q9NYK1 1049 aaKnown RBP30.18■■■□□ 2.42
PVT1-204ENST00000517525 MANSC4A6NHS7 340 aaPredicted RBP30.17■■■□□ 2.42
PVT1-204ENST00000517525 TSKSQ9UJT2 592 aa30.17■■■□□ 2.42
PVT1-204ENST00000517525 MYH2Q9UKX2 1941 aa30.16■■■□□ 2.42
PVT1-204ENST00000517525 TRPA1O75762 1119 aa30.16■■■□□ 2.42
PVT1-204ENST00000517525 CYP2E1P05181 493 aaPredicted RBP30.16■■■□□ 2.42
PVT1-204ENST00000517525 BTDP43251 543 aa30.16■■■□□ 2.42
PVT1-204ENST00000517525 CFHR5Q9BXR6 569 aa30.16■■■□□ 2.42
PVT1-204ENST00000517525 LRP2BPQ9P2M1 347 aa30.16■■■□□ 2.42
PVT1-204ENST00000517525 WDHD1O75717 1129 aaPredicted RBP30.15■■■□□ 2.42
PVT1-204ENST00000517525 RHBDL3P58872 404 aa30.15■■■□□ 2.42
PVT1-204ENST00000517525 AACSQ86V21 672 aa30.15■■■□□ 2.42
PVT1-204ENST00000517525 RAI14Q9P0K7 980 aa30.15■■■□□ 2.42
PVT1-204ENST00000517525 AKAP11Q9UKA4 1901 aa30.15■■■□□ 2.42
PVT1-204ENST00000517525 CLASRPQ8N2M8 674 aaKnown RBP30.14■■■□□ 2.42
PVT1-204ENST00000517525 SNRKQ9NRH2 765 aa30.14■■■□□ 2.42
PVT1-204ENST00000517525 ZNF112Q9UJU3 913 aa30.14■■■□□ 2.42
PVT1-204ENST00000517525 TCP10Q12799 353 aa30.13■■■□□ 2.41
PVT1-204ENST00000517525 VGLL4Q14135 290 aa30.13■■■□□ 2.41
PVT1-204ENST00000517525 NOM1Q5C9Z4 860 aaKnown RBP30.13■■■□□ 2.41
PVT1-204ENST00000517525 TMED8Q6PL24 325 aaPredicted RBP30.13■■■□□ 2.41
PVT1-204ENST00000517525 ZNF341Q9BYN7 854 aa30.13■■■□□ 2.41
PVT1-204ENST00000517525 TESPA1A2RU30 521 aaPredicted RBP30.12■■■□□ 2.41
PVT1-204ENST00000517525 GJA5P36382 358 aa30.12■■■□□ 2.41
PVT1-204ENST00000517525 ZAP70P43403 619 aa30.12■■■□□ 2.41
PVT1-204ENST00000517525 RGS3P49796 1198 aa30.12■■■□□ 2.41
PVT1-204ENST00000517525 MAP3K10Q02779 954 aa30.12■■■□□ 2.41
PVT1-204ENST00000517525 MKRN3Q13064 507 aaKnown RBP30.12■■■□□ 2.41
PVT1-204ENST00000517525 IL1RAPL2Q9NP60 686 aa30.12■■■□□ 2.41
PVT1-204ENST00000517525 CSADQ9Y600 493 aa30.12■■■□□ 2.41
PVT1-204ENST00000517525 ALDH1A1P00352 501 aa30.11■■■□□ 2.41
PVT1-204ENST00000517525 ZFPM1Q8IX07 1006 aa30.11■■■□□ 2.41
PVT1-204ENST00000517525 RRP1P56182 461 aaKnown RBP30.1■■■□□ 2.41
PVT1-204ENST00000517525 PPP4CP60510 307 aa30.1■■■□□ 2.41
PVT1-204ENST00000517525 PPIL4Q8WUA2 492 aaKnown RBP eCLIP30.1■■■□□ 2.41
PVT1-204ENST00000517525 OPTNQ96CV9 577 aa30.1■■■□□ 2.41
PVT1-204ENST00000517525 WRNIP1Q96S55 665 aa30.1■■■□□ 2.41
PVT1-204ENST00000517525 ELP3Q9H9T3 547 aa30.1■■■□□ 2.41
PVT1-204ENST00000517525 ATRNL1Q5VV63 1379 aa30.1■■■□□ 2.41
PVT1-204ENST00000517525 LAMB1P07942 1786 aa30.1■■■□□ 2.41
PVT1-204ENST00000517525 SPDYE5A6NIY4 337 aa30.09■■■□□ 2.41
PVT1-204ENST00000517525 NAA16Q6N069 864 aaPredicted RBP30.09■■■□□ 2.41
PVT1-204ENST00000517525 PIH1D3Q9NQM4 214 aaKnown RBP30.09■■■□□ 2.41
PVT1-204ENST00000517525 OTOFQ9HC10 1997 aa30.08■■■□□ 2.41
PVT1-204ENST00000517525 SH3BP5LQ7L8J4 393 aa30.08■■■□□ 2.41
PVT1-204ENST00000517525 DDX4Q9NQI0 724 aaKnown RBP30.08■■■□□ 2.41
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms