RNA–Protein interactions for RNA: ENST00000514537.5

CLDND1-230, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 1,013 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-230ENST00000514537 FPGT-TNNI3KV9GXZ4 949 aa28.4■■■□□ 2.14
CLDND1-230ENST00000514537 MAP3K9P80192 1104 aa28.38■■■□□ 2.13
CLDND1-230ENST00000514537 SPATA5Q8NB90 893 aa28.38■■■□□ 2.13
CLDND1-230ENST00000514537 FAM163AQ96GL9 167 aaPredicted RBP28.38■■■□□ 2.13
CLDND1-230ENST00000514537 USP40Q9NVE5 1235 aa28.38■■■□□ 2.13
CLDND1-230ENST00000514537 GAKO14976 1311 aa28.38■■■□□ 2.13
CLDND1-230ENST00000514537 MANSC4A6NHS7 340 aaPredicted RBP28.37■■■□□ 2.13
CLDND1-230ENST00000514537 UQCRFS1P1P0C7P4 283 aa28.37■■■□□ 2.13
CLDND1-230ENST00000514537 INHBEP58166 350 aa28.37■■■□□ 2.13
CLDND1-230ENST00000514537 PPP1R3FQ6ZSY5 799 aaPredicted RBP28.37■■■□□ 2.13
CLDND1-230ENST00000514537 DZIP1Q86YF9 867 aaKnown RBP28.37■■■□□ 2.13
CLDND1-230ENST00000514537 DDX55Q8NHQ9 600 aaKnown RBP eCLIP28.37■■■□□ 2.13
CLDND1-230ENST00000514537 FAM151AQ8WW52 585 aa28.37■■■□□ 2.13
CLDND1-230ENST00000514537 RPAP1Q9BWH6 1393 aaPredicted RBP28.37■■■□□ 2.13
CLDND1-230ENST00000514537 GJA5P36382 358 aa28.36■■■□□ 2.13
CLDND1-230ENST00000514537 NFIAQ12857 509 aa28.36■■■□□ 2.13
CLDND1-230ENST00000514537 PI16Q6UXB8 463 aa28.36■■■□□ 2.13
CLDND1-230ENST00000514537 ERICH6Q7L0X2 663 aa28.36■■■□□ 2.13
CLDND1-230ENST00000514537 SLF2Q8IX21 1173 aa28.36■■■□□ 2.13
CLDND1-230ENST00000514537 HOOK2Q96ED9 719 aa28.36■■■□□ 2.13
CLDND1-230ENST00000514537 AKAP11Q9UKA4 1901 aa28.35■■■□□ 2.13
CLDND1-230ENST00000514537 CASP8AP2Q9UKL3 1982 aa28.35■■■□□ 2.13
CLDND1-230ENST00000514537 MCAMP43121 646 aa28.35■■■□□ 2.13
CLDND1-230ENST00000514537 DBNDD2Q9BQY9 259 aa28.35■■■□□ 2.13
CLDND1-230ENST00000514537 ELP3Q9H9T3 547 aa28.35■■■□□ 2.13
CLDND1-230ENST00000514537 COG6Q9Y2V7 657 aa28.35■■■□□ 2.13
CLDND1-230ENST00000514537 TBC1D8O95759 1140 aa28.34■■■□□ 2.13
CLDND1-230ENST00000514537 ABHD8Q96I13 439 aa28.34■■■□□ 2.13
CLDND1-230ENST00000514537 FAM198AQ9UFP1 575 aa28.34■■■□□ 2.13
CLDND1-230ENST00000514537 DDX19BQ9UMR2 479 aa28.34■■■□□ 2.13
CLDND1-230ENST00000514537 MECOMQ03112 1051 aa28.33■■■□□ 2.13
CLDND1-230ENST00000514537 TCP10Q12799 353 aa28.33■■■□□ 2.13
CLDND1-230ENST00000514537 VGLL4Q14135 290 aa28.33■■■□□ 2.13
CLDND1-230ENST00000514537 CCDC158Q5M9N0 1113 aa28.33■■■□□ 2.13
CLDND1-230ENST00000514537 TBC1D9Q6ZT07 1266 aa28.33■■■□□ 2.13
CLDND1-230ENST00000514537 CFHR5Q9BXR6 569 aa28.33■■■□□ 2.13
CLDND1-230ENST00000514537 ZBTB40Q9NUA8 1239 aa28.33■■■□□ 2.13
CLDND1-230ENST00000514537 DCAF15Q66K64 600 aa28.32■■■□□ 2.12
CLDND1-230ENST00000514537 IFNL1Q8IU54 200 aa28.32■■■□□ 2.12
CLDND1-230ENST00000514537 ZNF384Q8TF68 577 aa28.32■■■□□ 2.12
CLDND1-230ENST00000514537 OPTNQ96CV9 577 aa28.32■■■□□ 2.12
CLDND1-230ENST00000514537 IDI2Q9BXS1 227 aa28.32■■■□□ 2.12
CLDND1-230ENST00000514537 CSADQ9Y600 493 aa28.32■■■□□ 2.12
CLDND1-230ENST00000514537 ALDH1A1P00352 501 aa28.31■■■□□ 2.12
CLDND1-230ENST00000514537 TTC39AQ5SRH9 613 aa28.31■■■□□ 2.12
CLDND1-230ENST00000514537 NSUN4Q96CB9 384 aaKnown RBP28.31■■■□□ 2.12
CLDND1-230ENST00000514537 ZNF512BQ96KM6 892 aaPredicted RBP28.31■■■□□ 2.12
CLDND1-230ENST00000514537 MCOLN1Q9GZU1 580 aa28.31■■■□□ 2.12
CLDND1-230ENST00000514537 MROH7-TTC4A0A0A0MT08 1334 aa28.3■■■□□ 2.12
CLDND1-230ENST00000514537 GPR75-ASB3A0A0A6YYF3 556 aa28.3■■■□□ 2.12
CLDND1-230ENST00000514537 DGKZQ13574 1117 aa28.3■■■□□ 2.12
CLDND1-230ENST00000514537 NOM1Q5C9Z4 860 aaKnown RBP28.3■■■□□ 2.12
CLDND1-230ENST00000514537 MIGA2Q7L4E1 593 aa28.3■■■□□ 2.12
CLDND1-230ENST00000514537 RPAP2Q8IXW5 612 aaPredicted RBP28.3■■■□□ 2.12
CLDND1-230ENST00000514537 EAF2Q96CJ1 260 aaPredicted RBP28.3■■■□□ 2.12
CLDND1-230ENST00000514537 DBNLQ9UJU6 430 aaKnown RBP28.3■■■□□ 2.12
CLDND1-230ENST00000514537 TESPA1A2RU30 521 aaPredicted RBP28.29■■■□□ 2.12
CLDND1-230ENST00000514537 ENTPD3O75355 529 aa28.29■■■□□ 2.12
CLDND1-230ENST00000514537 BTDP43251 543 aa28.29■■■□□ 2.12
CLDND1-230ENST00000514537 ZFPM1Q8IX07 1006 aa28.29■■■□□ 2.12
CLDND1-230ENST00000514537 CNKSR2Q8WXI2 1034 aa28.29■■■□□ 2.12
CLDND1-230ENST00000514537 WRNIP1Q96S55 665 aa28.29■■■□□ 2.12
CLDND1-230ENST00000514537 ZNF341Q9BYN7 854 aa28.29■■■□□ 2.12
CLDND1-230ENST00000514537 EXOC6BQ9Y2D4 811 aa28.29■■■□□ 2.12
CLDND1-230ENST00000514537 IGF2BP3O00425 579 aaKnown RBP eCLIP28.28■■■□□ 2.12
CLDND1-230ENST00000514537 LDHCP07864 332 aa28.28■■■□□ 2.12
CLDND1-230ENST00000514537 RGS3P49796 1198 aa28.28■■■□□ 2.12
CLDND1-230ENST00000514537 GSTO1P78417 241 aa28.28■■■□□ 2.12
CLDND1-230ENST00000514537 ERC1Q8IUD2 1116 aa28.28■■■□□ 2.12
CLDND1-230ENST00000514537 MS4A4AQ96JQ5 239 aa28.28■■■□□ 2.12
CLDND1-230ENST00000514537 CCDC8Q9H0W5 538 aaPredicted RBP28.28■■■□□ 2.12
CLDND1-230ENST00000514537 CHMP4BQ9H444 224 aaKnown RBP28.28■■■□□ 2.12
CLDND1-230ENST00000514537 SNRKQ9NRH2 765 aa28.28■■■□□ 2.12
CLDND1-230ENST00000514537 RAI14Q9P0K7 980 aa28.28■■■□□ 2.12
CLDND1-230ENST00000514537 SNCAIPQ9Y6H5 919 aa28.28■■■□□ 2.12
CLDND1-230ENST00000514537 GPR25O00155 361 aa28.27■■■□□ 2.12
CLDND1-230ENST00000514537 WDHD1O75717 1129 aaPredicted RBP28.27■■■□□ 2.12
CLDND1-230ENST00000514537 PDE3AQ14432 1141 aa28.27■■■□□ 2.12
CLDND1-230ENST00000514537 ZNF296Q8WUU4 475 aaPredicted RBP28.27■■■□□ 2.12
CLDND1-230ENST00000514537 ZKSCAN4Q969J2 545 aaPredicted RBP28.27■■■□□ 2.12
CLDND1-230ENST00000514537 R3HDMLQ9H3Y0 253 aa28.27■■■□□ 2.12
CLDND1-230ENST00000514537 TLR7Q9NYK1 1049 aaKnown RBP28.27■■■□□ 2.12
CLDND1-230ENST00000514537 LRP2BPQ9P2M1 347 aa28.27■■■□□ 2.12
CLDND1-230ENST00000514537 RFX7Q2KHR2 1363 aa28.26■■■□□ 2.12
CLDND1-230ENST00000514537 SPDYE5A6NIY4 337 aa28.26■■■□□ 2.11
CLDND1-230ENST00000514537 RHBDL3P58872 404 aa28.26■■■□□ 2.11
CLDND1-230ENST00000514537 HSP90AB4PQ58FF6 505 aa28.26■■■□□ 2.11
CLDND1-230ENST00000514537 SIRT2Q8IXJ6 389 aa28.26■■■□□ 2.11
CLDND1-230ENST00000514537 PTPN18Q99952 460 aa28.26■■■□□ 2.11
CLDND1-230ENST00000514537 ZNF112Q9UJU3 913 aa28.26■■■□□ 2.11
CLDND1-230ENST00000514537 OTOFQ9HC10 1997 aa28.25■■■□□ 2.11
CLDND1-230ENST00000514537 C20orf194Q5TEA3 1177 aa28.25■■■□□ 2.11
CLDND1-230ENST00000514537 OTUD7BQ6GQQ9 843 aa28.25■■■□□ 2.11
CLDND1-230ENST00000514537 GOLGA6L2Q8N9W4 650 aaPredicted RBP28.25■■■□□ 2.11
CLDND1-230ENST00000514537 MYH2Q9UKX2 1941 aa28.25■■■□□ 2.11
CLDND1-230ENST00000514537 MAP4K4O95819 1239 aaPredicted RBP28.24■■■□□ 2.11
CLDND1-230ENST00000514537 CYP2E1P05181 493 aaPredicted RBP28.24■■■□□ 2.11
CLDND1-230ENST00000514537 ERO1BQ86YB8 467 aa28.24■■■□□ 2.11
CLDND1-230ENST00000514537 OTUD5Q96G74 571 aa28.24■■■□□ 2.11
CLDND1-230ENST00000514537 DDX4Q9NQI0 724 aaKnown RBP28.24■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms