RNA–Protein interactions for RNA: ENST00000513819.1

NIPBL-207, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 3

Gene NIPBL, Length 452 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-207ENST00000513819 MAOBP27338 520 aa6.76□□□□□ -1.33
NIPBL-207ENST00000513819 DGKGP49619 791 aa6.76□□□□□ -1.33
NIPBL-207ENST00000513819 NLRP12P59046 1061 aa6.76□□□□□ -1.33
NIPBL-207ENST00000513819 POU4F3Q15319 338 aa6.76□□□□□ -1.33
NIPBL-207ENST00000513819 SEZ6Q53EL9 994 aa6.76□□□□□ -1.33
NIPBL-207ENST00000513819 LCE2AQ5TA79 106 aaPredicted RBP6.76□□□□□ -1.33
NIPBL-207ENST00000513819 ZNF385CQ66K41 422 aaPredicted RBP6.76□□□□□ -1.33
NIPBL-207ENST00000513819 GATAD2BQ8WXI9 593 aa6.76□□□□□ -1.33
NIPBL-207ENST00000513819 DNAJC2Q99543 621 aaKnown RBP6.76□□□□□ -1.33
NIPBL-207ENST00000513819 CORO1BQ9BR76 489 aa6.76□□□□□ -1.33
NIPBL-207ENST00000513819 FAM221AA4D161 298 aa6.75□□□□□ -1.33
NIPBL-207ENST00000513819 CYP11A1P05108 521 aa6.75□□□□□ -1.33
NIPBL-207ENST00000513819 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.75□□□□□ -1.33
NIPBL-207ENST00000513819 ILDR2Q71H61 639 aa6.75□□□□□ -1.33
NIPBL-207ENST00000513819 CCDC84Q86UT8 332 aaPredicted RBP6.75□□□□□ -1.33
NIPBL-207ENST00000513819 KLHL23Q8NBE8 558 aa6.75□□□□□ -1.33
NIPBL-207ENST00000513819 NEDD1Q8NHV4 660 aa6.75□□□□□ -1.33
NIPBL-207ENST00000513819 SEC16BQ96JE7 1060 aa6.75□□□□□ -1.33
NIPBL-207ENST00000513819 SPATA32Q96LK8 384 aa6.75□□□□□ -1.33
NIPBL-207ENST00000513819 USP26Q9BXU7 913 aa6.75□□□□□ -1.33
NIPBL-207ENST00000513819 CCDC86Q9H6F5 360 aaKnown RBP6.75□□□□□ -1.33
NIPBL-207ENST00000513819 ADAM11O75078 769 aa6.74□□□□□ -1.33
NIPBL-207ENST00000513819 CILPO75339 1184 aa6.74□□□□□ -1.33
NIPBL-207ENST00000513819 DEAF1O75398 565 aaPredicted RBP6.74□□□□□ -1.33
NIPBL-207ENST00000513819 TRIM37O94972 964 aa6.74□□□□□ -1.33
NIPBL-207ENST00000513819 CDK8P49336 464 aa6.74□□□□□ -1.33
NIPBL-207ENST00000513819 PDE3AQ14432 1141 aa6.74□□□□□ -1.33
NIPBL-207ENST00000513819 SUZ12Q15022 739 aaKnown RBP6.74□□□□□ -1.33
NIPBL-207ENST00000513819 FOXD4L6Q3SYB3 417 aaPredicted RBP6.74□□□□□ -1.33
NIPBL-207ENST00000513819 TRAPPC3LQ5T215 181 aa6.74□□□□□ -1.33
NIPBL-207ENST00000513819 FOXD4L3Q6VB84 417 aaPredicted RBP6.74□□□□□ -1.33
NIPBL-207ENST00000513819 SLITRK4Q8IW52 837 aa6.74□□□□□ -1.33
NIPBL-207ENST00000513819 SVOPQ8N4V2 548 aa6.74□□□□□ -1.33
NIPBL-207ENST00000513819 GPBAR1Q8TDU6 330 aa6.74□□□□□ -1.33
NIPBL-207ENST00000513819 KCNK4Q9NYG8 393 aa6.74□□□□□ -1.33
NIPBL-207ENST00000513819 ROBO2Q9HCK4 1378 aa6.73□□□□□ -1.33
NIPBL-207ENST00000513819 BPNT1O95861 308 aa6.73□□□□□ -1.33
NIPBL-207ENST00000513819 SSBP05455 408 aaKnown RBP eCLIP6.73□□□□□ -1.33
NIPBL-207ENST00000513819 SELPP16109 830 aa6.73□□□□□ -1.33
NIPBL-207ENST00000513819 LIG1P18858 919 aa6.73□□□□□ -1.33
NIPBL-207ENST00000513819 MCM4P33991 863 aa6.73□□□□□ -1.33
NIPBL-207ENST00000513819 SOX9P48436 509 aa6.73□□□□□ -1.33
NIPBL-207ENST00000513819 MPP2Q14168 576 aa6.73□□□□□ -1.33
NIPBL-207ENST00000513819 WDR89Q96FK6 387 aaPredicted RBP6.73□□□□□ -1.33
NIPBL-207ENST00000513819 ACSBG1Q96GR2 724 aa6.73□□□□□ -1.33
NIPBL-207ENST00000513819 LRRC3Q9BY71 257 aa6.73□□□□□ -1.33
NIPBL-207ENST00000513819 PCDHA4Q9UN74 947 aa6.73□□□□□ -1.33
NIPBL-207ENST00000513819 MRVI1Q9Y6F6 885 aa6.73□□□□□ -1.33
NIPBL-207ENST00000513819 LOC100289279A0A1B0GTE1 492 aa6.72□□□□□ -1.33
NIPBL-207ENST00000513819 ZNF862O60290 1169 aa6.72□□□□□ -1.33
NIPBL-207ENST00000513819 STK10O94804 968 aaKnown RBP6.72□□□□□ -1.33
NIPBL-207ENST00000513819 CD68P34810 354 aaPredicted RBP6.72□□□□□ -1.33
NIPBL-207ENST00000513819 SNRPNP63162 240 aaKnown RBP6.72□□□□□ -1.33
NIPBL-207ENST00000513819 RPL6Q02878 288 aaKnown RBP6.72□□□□□ -1.33
NIPBL-207ENST00000513819 CWF19L2Q2TBE0 894 aaKnown RBP6.72□□□□□ -1.33
NIPBL-207ENST00000513819 CCDC81Q6ZN84 652 aa6.72□□□□□ -1.33
NIPBL-207ENST00000513819 REC114Q7Z4M0 266 aa6.72□□□□□ -1.33
NIPBL-207ENST00000513819 MAP4K3Q8IVH8 894 aa6.72□□□□□ -1.33
NIPBL-207ENST00000513819 TRIM11Q96F44 468 aa6.72□□□□□ -1.33
NIPBL-207ENST00000513819 BRMS1Q9HCU9 246 aa6.72□□□□□ -1.33
NIPBL-207ENST00000513819 CACNA2D2Q9NY47 1150 aa6.72□□□□□ -1.33
NIPBL-207ENST00000513819 STK17AQ9UEE5 414 aa6.72□□□□□ -1.33
NIPBL-207ENST00000513819 PPT2Q9UMR5 302 aa6.72□□□□□ -1.33
NIPBL-207ENST00000513819 EIF4EBP3O60516 100 aaPredicted RBP6.71□□□□□ -1.34
NIPBL-207ENST00000513819 DLGAP3O95886 979 aa6.71□□□□□ -1.34
NIPBL-207ENST00000513819 COL9A2Q14055 689 aaPredicted RBP6.71□□□□□ -1.34
NIPBL-207ENST00000513819 INPP5AQ14642 412 aa6.71□□□□□ -1.34
NIPBL-207ENST00000513819 DIEXFQ68CQ4 756 aaKnown RBP6.71□□□□□ -1.34
NIPBL-207ENST00000513819 SCARA3Q6AZY7 606 aa6.71□□□□□ -1.34
NIPBL-207ENST00000513819 GK5Q6ZS86 529 aa6.71□□□□□ -1.34
NIPBL-207ENST00000513819 PMFBP1Q8TBY8 1022 aa6.71□□□□□ -1.34
NIPBL-207ENST00000513819 UBASH3BQ8TF42 649 aa6.71□□□□□ -1.34
NIPBL-207ENST00000513819 CPLX3Q8WVH0 158 aa6.71□□□□□ -1.34
NIPBL-207ENST00000513819 ARMC5Q96C12 935 aa6.71□□□□□ -1.34
NIPBL-207ENST00000513819 ENAMQ9NRM1 1142 aa6.71□□□□□ -1.34
NIPBL-207ENST00000513819 KRT82Q9NSB4 513 aa6.71□□□□□ -1.34
NIPBL-207ENST00000513819 A0A0A0MRY4 1105 aa6.7□□□□□ -1.34
NIPBL-207ENST00000513819 FAM229AH3BQW9 127 aa6.7□□□□□ -1.34
NIPBL-207ENST00000513819 GRIN3BO60391 1043 aa6.7□□□□□ -1.34
NIPBL-207ENST00000513819 ARHGEF15O94989 841 aa6.7□□□□□ -1.34
NIPBL-207ENST00000513819 ETFBP38117 255 aa6.7□□□□□ -1.34
NIPBL-207ENST00000513819 CLCQ05315 142 aa6.7□□□□□ -1.34
NIPBL-207ENST00000513819 WIPI1Q5MNZ9 446 aaPredicted RBP6.7□□□□□ -1.34
NIPBL-207ENST00000513819 FBXW10Q5XX13 1052 aa6.7□□□□□ -1.34
NIPBL-207ENST00000513819 LRFN4Q6PJG9 635 aa6.7□□□□□ -1.34
NIPBL-207ENST00000513819 LINC00114Q6XXX2 140 aa6.7□□□□□ -1.34
NIPBL-207ENST00000513819 FMR1NBQ8N0W7 255 aaPredicted RBP6.7□□□□□ -1.34
NIPBL-207ENST00000513819 DTWD1Q8N5C7 304 aa6.7□□□□□ -1.34
NIPBL-207ENST00000513819 PLVAPQ9BX97 442 aa6.7□□□□□ -1.34
NIPBL-207ENST00000513819 SRRTQ9BXP5 876 aaKnown RBP6.7□□□□□ -1.34
NIPBL-207ENST00000513819 ZNF408Q9H9D4 720 aa6.7□□□□□ -1.34
NIPBL-207ENST00000513819 POLR3KQ9Y2Y1 108 aaPredicted RBP6.7□□□□□ -1.34
NIPBL-207ENST00000513819 DCDC2CA8MYV0 355 aa6.69□□□□□ -1.34
NIPBL-207ENST00000513819 WISP1O95388 367 aa6.69□□□□□ -1.34
NIPBL-207ENST00000513819 ZNF165P49910 485 aa6.69□□□□□ -1.34
NIPBL-207ENST00000513819 RBL2Q08999 1139 aa6.69□□□□□ -1.34
NIPBL-207ENST00000513819 DPH6Q7L8W6 267 aa6.69□□□□□ -1.34
NIPBL-207ENST00000513819 FBXO11Q86XK2 927 aa6.69□□□□□ -1.34
NIPBL-207ENST00000513819 ANAPC16Q96DE5 110 aa6.69□□□□□ -1.34
NIPBL-207ENST00000513819 PLPPR2Q96GM1 343 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms