RNA–Protein interactions for RNA: ENST00000513284.5

RNF4-218, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 517 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-218ENST00000513284 WDR43Q15061 677 aaKnown RBP eCLIP14.29□□□□□ -0.12
RNF4-218ENST00000513284 LMBR1LQ6UX01 489 aa14.29□□□□□ -0.12
RNF4-218ENST00000513284 LDHAL6AQ6ZMR3 332 aa14.29□□□□□ -0.12
RNF4-218ENST00000513284 FAM83AQ86UY5 434 aa14.29□□□□□ -0.12
RNF4-218ENST00000513284 LINS1Q8NG48 757 aa14.29□□□□□ -0.12
RNF4-218ENST00000513284 PAWRQ96IZ0 340 aaKnown RBP14.29□□□□□ -0.12
RNF4-218ENST00000513284 DEFB118Q96PH6 123 aa14.29□□□□□ -0.12
RNF4-218ENST00000513284 ZNF112Q9UJU3 913 aa14.29□□□□□ -0.12
RNF4-218ENST00000513284 ADCY3O60266 1144 aa14.28□□□□□ -0.12
RNF4-218ENST00000513284 CYP2C8P10632 490 aa14.28□□□□□ -0.12
RNF4-218ENST00000513284 HDLBPQ00341 1268 aaKnown RBP14.28□□□□□ -0.12
RNF4-218ENST00000513284 FBXO33Q7Z6M2 555 aa14.28□□□□□ -0.12
RNF4-218ENST00000513284 SLAIN1Q8ND83 568 aa14.28□□□□□ -0.12
RNF4-218ENST00000513284 DIS3LQ8TF46 1054 aaKnown RBP14.28□□□□□ -0.12
RNF4-218ENST00000513284 TSR2Q969E8 191 aaKnown RBP14.28□□□□□ -0.12
RNF4-218ENST00000513284 CHMP4AQ9BY43 222 aa14.28□□□□□ -0.12
RNF4-218ENST00000513284 PAK6Q9NQU5 681 aaPredicted RBP14.28□□□□□ -0.12
RNF4-218ENST00000513284 MYBBP1AQ9BQG0 1328 aaKnown RBP14.27□□□□□ -0.12
RNF4-218ENST00000513284 INHAP05111 366 aa14.27□□□□□ -0.13
RNF4-218ENST00000513284 FLT3LGP49771 235 aa14.27□□□□□ -0.13
RNF4-218ENST00000513284 BCAMP50895 628 aa14.27□□□□□ -0.13
RNF4-218ENST00000513284 UBE4AQ14139 1066 aa14.27□□□□□ -0.13
RNF4-218ENST00000513284 LRIT3Q3SXY7 679 aa14.27□□□□□ -0.13
RNF4-218ENST00000513284 FKBP1CQ5VVH2 108 aa14.27□□□□□ -0.13
RNF4-218ENST00000513284 DNAAF4Q8WXU2 420 aa14.27□□□□□ -0.13
RNF4-218ENST00000513284 ZDHHC15Q96MV8 337 aa14.27□□□□□ -0.13
RNF4-218ENST00000513284 MRIQ9BWK5 157 aa14.27□□□□□ -0.13
RNF4-218ENST00000513284 PUS3Q9BZE2 481 aaKnown RBP14.27□□□□□ -0.13
RNF4-218ENST00000513284 IQSEC3Q9UPP2 1182 aaPredicted RBP14.27□□□□□ -0.13
RNF4-218ENST00000513284 CHMP3Q9Y3E7 222 aa14.27□□□□□ -0.13
RNF4-218ENST00000513284 EYSQ5T1H1 3165 aa14.27□□□□□ -0.13
RNF4-218ENST00000513284 FCGRTP55899 365 aa14.26□□□□□ -0.13
RNF4-218ENST00000513284 CALD1Q05682 793 aaKnown RBP14.26□□□□□ -0.13
RNF4-218ENST00000513284 FLIIQ13045 1269 aa14.26□□□□□ -0.13
RNF4-218ENST00000513284 PXYLP1Q8TE99 480 aa14.26□□□□□ -0.13
RNF4-218ENST00000513284 STK31Q9BXU1 1019 aa14.26□□□□□ -0.13
RNF4-218ENST00000513284 ZNF341Q9BYN7 854 aa14.26□□□□□ -0.13
RNF4-218ENST00000513284 MYH16Q9H6N6 1097 aa14.26□□□□□ -0.13
RNF4-218ENST00000513284 ZMYND8Q9ULU4 1186 aaPredicted RBP14.26□□□□□ -0.13
RNF4-218ENST00000513284 MGAMO43451 1857 aa14.26□□□□□ -0.13
RNF4-218ENST00000513284 CNNM1Q9NRU3 951 aa14.25□□□□□ -0.13
RNF4-218ENST00000513284 IRF5Q13568 498 aa14.24□□□□□ -0.13
RNF4-218ENST00000513284 TWISTNBQ3B726 338 aaPredicted RBP14.24□□□□□ -0.13
RNF4-218ENST00000513284 BEND3Q5T5X7 828 aa14.24□□□□□ -0.13
RNF4-218ENST00000513284 DCAF15Q66K64 600 aa14.24□□□□□ -0.13
RNF4-218ENST00000513284 TEKT1Q969V4 418 aa14.24□□□□□ -0.13
RNF4-218ENST00000513284 SPTBN5Q9NRC6 3674 aaKnown RBP14.24□□□□□ -0.13
RNF4-218ENST00000513284 F6X3S4 739 aa14.23□□□□□ -0.13
RNF4-218ENST00000513284 CXCL11O14625 94 aa14.23□□□□□ -0.13
RNF4-218ENST00000513284 SYN1P17600 705 aa14.23□□□□□ -0.13
RNF4-218ENST00000513284 CAPN2P17655 700 aa14.23□□□□□ -0.13
RNF4-218ENST00000513284 MAGEA10P43363 369 aaPredicted RBP14.23□□□□□ -0.13
RNF4-218ENST00000513284 CHAF1AQ13111 956 aaPredicted RBP14.23□□□□□ -0.13
RNF4-218ENST00000513284 FKBP5Q13451 457 aaPredicted RBP14.23□□□□□ -0.13
RNF4-218ENST00000513284 CCDC57Q2TAC2 916 aa14.23□□□□□ -0.13
RNF4-218ENST00000513284 NECAB2Q7Z6G3 386 aa14.23□□□□□ -0.13
RNF4-218ENST00000513284 C7orf61Q8IZ16 206 aa14.23□□□□□ -0.13
RNF4-218ENST00000513284 DOCK3Q8IZD9 2030 aa14.23□□□□□ -0.13
RNF4-218ENST00000513284 PRUNE2Q8WUY3 3088 aa14.22□□□□□ -0.13
RNF4-218ENST00000513284 NOL9Q5SY16 702 aaKnown RBP14.22□□□□□ -0.13
RNF4-218ENST00000513284 ZFPM1Q8IX07 1006 aa14.22□□□□□ -0.13
RNF4-218ENST00000513284 FAM151AQ8WW52 585 aa14.22□□□□□ -0.13
RNF4-218ENST00000513284 HOOK2Q96ED9 719 aa14.22□□□□□ -0.13
RNF4-218ENST00000513284 KAZALD1Q96I82 304 aa14.22□□□□□ -0.13
RNF4-218ENST00000513284 PARK7Q99497 189 aaKnown RBP14.22□□□□□ -0.13
RNF4-218ENST00000513284 PHF20L1A8MW92 1017 aa14.21□□□□□ -0.13
RNF4-218ENST00000513284 POTEB2H3BUK9 544 aa14.21□□□□□ -0.13
RNF4-218ENST00000513284 TCP10Q12799 353 aa14.21□□□□□ -0.13
RNF4-218ENST00000513284 NFIAQ12857 509 aa14.21□□□□□ -0.13
RNF4-218ENST00000513284 HHIPL2Q6UWX4 724 aa14.21□□□□□ -0.13
RNF4-218ENST00000513284 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.21□□□□□ -0.13
RNF4-218ENST00000513284 TDHQ8IZJ6 230 aa14.21□□□□□ -0.13
RNF4-218ENST00000513284 RPAP1Q9BWH6 1393 aaPredicted RBP14.21□□□□□ -0.14
RNF4-218ENST00000513284 A0A0G2JLL6 359 aaPredicted RBP14.2□□□□□ -0.14
RNF4-218ENST00000513284 SLURP2P0DP57 97 aa14.2□□□□□ -0.14
RNF4-218ENST00000513284 TRIM32Q13049 653 aa14.2□□□□□ -0.14
RNF4-218ENST00000513284 TAF7LQ5H9L4 462 aa14.2□□□□□ -0.14
RNF4-218ENST00000513284 PRRT2Q7Z6L0 340 aaPredicted RBP14.2□□□□□ -0.14
RNF4-218ENST00000513284 TBC1D22AQ8WUA7 517 aa14.2□□□□□ -0.14
RNF4-218ENST00000513284 GUCD1Q96NT3 240 aa14.2□□□□□ -0.14
RNF4-218ENST00000513284 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.2□□□□□ -0.14
RNF4-218ENST00000513284 FAM198AQ9UFP1 575 aa14.2□□□□□ -0.14
RNF4-218ENST00000513284 AFG3L2Q9Y4W6 797 aa14.2□□□□□ -0.14
RNF4-218ENST00000513284 GRM8O00222 908 aa14.19□□□□□ -0.14
RNF4-218ENST00000513284 LRRC24Q50LG9 513 aa14.19□□□□□ -0.14
RNF4-218ENST00000513284 CDC42EP5Q6NZY7 148 aa14.19□□□□□ -0.14
RNF4-218ENST00000513284 TMOD2Q9NZR1 351 aa14.19□□□□□ -0.14
RNF4-218ENST00000513284 ZHX2Q9Y6X8 837 aa14.19□□□□□ -0.14
RNF4-218ENST00000513284 DNAH12Q6ZR08 3092 aa14.19□□□□□ -0.14
RNF4-218ENST00000513284 TNPO2O14787 897 aaKnown RBP14.18□□□□□ -0.14
RNF4-218ENST00000513284 VAMP4O75379 141 aa14.18□□□□□ -0.14
RNF4-218ENST00000513284 FASTKD5Q7L8L6 764 aaKnown RBP14.18□□□□□ -0.14
RNF4-218ENST00000513284 VGLL2Q8N8G2 317 aa14.18□□□□□ -0.14
RNF4-218ENST00000513284 ANKLE1Q8NAG6 615 aa14.18□□□□□ -0.14
RNF4-218ENST00000513284 NBPF3Q9H094 633 aa14.18□□□□□ -0.14
RNF4-218ENST00000513284 GJD2Q9UKL4 321 aa14.18□□□□□ -0.14
RNF4-218ENST00000513284 SUGT1Q9Y2Z0 365 aa14.18□□□□□ -0.14
RNF4-218ENST00000513284 ATRNL1Q5VV63 1379 aa14.18□□□□□ -0.14
RNF4-218ENST00000513284 PTPRAP18433 802 aa14.17□□□□□ -0.14
RNF4-218ENST00000513284 DDX10Q13206 875 aaKnown RBP14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 183.2 ms