RNA–Protein interactions for RNA: ENST00000511263.1

HMGB3P13-201, Transcript of high mobility group box 3 pseudogene 13, humanhuman

BASIC

Gene HMGB3P13, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P13-201ENST00000511263 FOXD4L4Q8WXT5 416 aaPredicted RBP7.05□□□□□ -1.28
HMGB3P13-201ENST00000511263 DUSP9Q99956 384 aaKnown RBP7.05□□□□□ -1.28
HMGB3P13-201ENST00000511263 BCL2L13Q9BXK5 485 aa7.05□□□□□ -1.28
HMGB3P13-201ENST00000511263 AK5Q9Y6K8 562 aa7.05□□□□□ -1.28
HMGB3P13-201ENST00000511263 PRR19A6NJB7 356 aa7.04□□□□□ -1.28
HMGB3P13-201ENST00000511263 ADAM11O75078 769 aa7.04□□□□□ -1.28
HMGB3P13-201ENST00000511263 TXKP42681 527 aa7.04□□□□□ -1.28
HMGB3P13-201ENST00000511263 ZNF423Q2M1K9 1284 aa7.04□□□□□ -1.28
HMGB3P13-201ENST00000511263 UBASH3BQ8TF42 649 aa7.04□□□□□ -1.28
HMGB3P13-201ENST00000511263 RAD18Q9NS91 495 aa7.04□□□□□ -1.28
HMGB3P13-201ENST00000511263 WWC3Q9ULE0 1092 aa7.04□□□□□ -1.28
HMGB3P13-201ENST00000511263 SORBS3O60504 671 aa7.03□□□□□ -1.28
HMGB3P13-201ENST00000511263 RLBP1P12271 317 aa7.03□□□□□ -1.28
HMGB3P13-201ENST00000511263 RNF43Q68DV7 783 aa7.03□□□□□ -1.28
HMGB3P13-201ENST00000511263 PI16Q6UXB8 463 aa7.03□□□□□ -1.28
HMGB3P13-201ENST00000511263 MYRFLQ96LU7 910 aa7.03□□□□□ -1.28
HMGB3P13-201ENST00000511263 YIPF2Q9BWQ6 316 aa7.03□□□□□ -1.28
HMGB3P13-201ENST00000511263 CCDC9Q9Y3X0 531 aaKnown RBP7.03□□□□□ -1.28
HMGB3P13-201ENST00000511263 GAS2O43903 313 aaKnown RBP7.02□□□□□ -1.29
HMGB3P13-201ENST00000511263 USP17L7P0C7H9 530 aa7.02□□□□□ -1.29
HMGB3P13-201ENST00000511263 LMNB1P20700 586 aa7.02□□□□□ -1.29
HMGB3P13-201ENST00000511263 DAB2P98082 770 aa7.02□□□□□ -1.29
HMGB3P13-201ENST00000511263 LRRC14Q15048 493 aa7.02□□□□□ -1.29
HMGB3P13-201ENST00000511263 SCARA3Q6AZY7 606 aa7.02□□□□□ -1.29
HMGB3P13-201ENST00000511263 TMC4Q7Z404 712 aa7.02□□□□□ -1.29
HMGB3P13-201ENST00000511263 PARP2Q9UGN5 583 aa7.02□□□□□ -1.29
HMGB3P13-201ENST00000511263 TTF2Q9UNY4 1162 aaKnown RBP7.02□□□□□ -1.29
HMGB3P13-201ENST00000511263 HIF3AQ9Y2N7 669 aa7.02□□□□□ -1.29
HMGB3P13-201ENST00000511263 LOC100289279A0A1B0GTE1 492 aa7.01□□□□□ -1.29
HMGB3P13-201ENST00000511263 CENPBP07199 599 aaPredicted RBP7.01□□□□□ -1.29
HMGB3P13-201ENST00000511263 SLFN14P0C7P3 912 aa7.01□□□□□ -1.29
HMGB3P13-201ENST00000511263 MAOBP27338 520 aa7.01□□□□□ -1.29
HMGB3P13-201ENST00000511263 PDE3AQ14432 1141 aa7.01□□□□□ -1.29
HMGB3P13-201ENST00000511263 FBXO33Q7Z6M2 555 aa7.01□□□□□ -1.29
HMGB3P13-201ENST00000511263 DTX1Q86Y01 620 aa7.01□□□□□ -1.29
HMGB3P13-201ENST00000511263 SMG8Q8ND04 991 aaKnown RBP7.01□□□□□ -1.29
HMGB3P13-201ENST00000511263 DBNDD2Q9BQY9 259 aa7.01□□□□□ -1.29
HMGB3P13-201ENST00000511263 OSBPL7Q9BZF2 842 aa7.01□□□□□ -1.29
HMGB3P13-201ENST00000511263 SUGCTQ9HAC7 445 aa7.01□□□□□ -1.29
HMGB3P13-201ENST00000511263 RNF114Q9Y508 228 aa7.01□□□□□ -1.29
HMGB3P13-201ENST00000511263 SYNGAP1Q96PV0 1343 aa7.01□□□□□ -1.29
HMGB3P13-201ENST00000511263 EIF5BO60841 1220 aaKnown RBP7□□□□□ -1.29
HMGB3P13-201ENST00000511263 NME2P22392 152 aa7□□□□□ -1.29
HMGB3P13-201ENST00000511263 SV2BQ7L1I2 683 aa7□□□□□ -1.29
HMGB3P13-201ENST00000511263 FAM20CQ8IXL6 584 aa7□□□□□ -1.29
HMGB3P13-201ENST00000511263 C12orf50Q8NA57 414 aaPredicted RBP7□□□□□ -1.29
HMGB3P13-201ENST00000511263 SHKBP1Q8TBC3 707 aa7□□□□□ -1.29
HMGB3P13-201ENST00000511263 KRT82Q9NSB4 513 aa7□□□□□ -1.29
HMGB3P13-201ENST00000511263 PREPP48147 710 aa6.99□□□□□ -1.29
HMGB3P13-201ENST00000511263 INTS5Q6P9B9 1019 aaKnown RBP6.99□□□□□ -1.29
HMGB3P13-201ENST00000511263 SULF2Q8IWU5 870 aa6.99□□□□□ -1.29
HMGB3P13-201ENST00000511263 C3orf58Q8NDZ4 430 aa6.99□□□□□ -1.29
HMGB3P13-201ENST00000511263 NECAB3Q96P71 396 aaPredicted RBP6.99□□□□□ -1.29
HMGB3P13-201ENST00000511263 TMPRSS13Q9BYE2 586 aa6.99□□□□□ -1.29
HMGB3P13-201ENST00000511263 VTI1BQ9UEU0 232 aa6.99□□□□□ -1.29
HMGB3P13-201ENST00000511263 GSTP1P09211 210 aaKnown RBP6.98□□□□□ -1.29
HMGB3P13-201ENST00000511263 BMP3P12645 472 aa6.98□□□□□ -1.29
HMGB3P13-201ENST00000511263 YBX3P16989 372 aaKnown RBP eCLIP6.98□□□□□ -1.29
HMGB3P13-201ENST00000511263 ARNTP27540 789 aa6.98□□□□□ -1.29
HMGB3P13-201ENST00000511263 GRIK1P39086 918 aa6.98□□□□□ -1.29
HMGB3P13-201ENST00000511263 ST13P50502 369 aaKnown RBP6.98□□□□□ -1.29
HMGB3P13-201ENST00000511263 USP11P51784 963 aa6.98□□□□□ -1.29
HMGB3P13-201ENST00000511263 TPTE2Q6XPS3 522 aa6.98□□□□□ -1.29
HMGB3P13-201ENST00000511263 BEND4Q6ZU67 534 aa6.98□□□□□ -1.29
HMGB3P13-201ENST00000511263 GIMAP7Q8NHV1 300 aa6.98□□□□□ -1.29
HMGB3P13-201ENST00000511263 GIPC2Q8TF65 315 aa6.98□□□□□ -1.29
HMGB3P13-201ENST00000511263 CRELD1Q96HD1 420 aa6.98□□□□□ -1.29
HMGB3P13-201ENST00000511263 SETDB2Q96T68 719 aa6.98□□□□□ -1.29
HMGB3P13-201ENST00000511263 FAM83CQ9BQN1 747 aa6.98□□□□□ -1.29
HMGB3P13-201ENST00000511263 CBX8Q9HC52 389 aa6.98□□□□□ -1.29
HMGB3P13-201ENST00000511263 CYP8B1Q9UNU6 501 aa6.98□□□□□ -1.29
HMGB3P13-201ENST00000511263 HOXA10P31260 410 aaPredicted RBP6.97□□□□□ -1.29
HMGB3P13-201ENST00000511263 ZNF157P51786 506 aaPredicted RBP6.97□□□□□ -1.29
HMGB3P13-201ENST00000511263 FAAP100Q0VG06 881 aa6.97□□□□□ -1.29
HMGB3P13-201ENST00000511263 TAF1CQ15572 869 aaPredicted RBP6.97□□□□□ -1.29
HMGB3P13-201ENST00000511263 CLEC10AQ8IUN9 316 aa6.97□□□□□ -1.29
HMGB3P13-201ENST00000511263 KCNF1Q9H3M0 494 aa6.97□□□□□ -1.29
HMGB3P13-201ENST00000511263 MYO15BQ96JP2 1530 aa6.96□□□□□ -1.29
HMGB3P13-201ENST00000511263 WNT11O96014 354 aa6.96□□□□□ -1.3
HMGB3P13-201ENST00000511263 PWP1Q13610 501 aa6.96□□□□□ -1.3
HMGB3P13-201ENST00000511263 CCDC85BQ15834 202 aaPredicted RBP6.96□□□□□ -1.3
HMGB3P13-201ENST00000511263 HGSNATQ68CP4 663 aa6.96□□□□□ -1.3
HMGB3P13-201ENST00000511263 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.96□□□□□ -1.3
HMGB3P13-201ENST00000511263 KCNB2Q92953 911 aa6.96□□□□□ -1.3
HMGB3P13-201ENST00000511263 ACSBG1Q96GR2 724 aa6.96□□□□□ -1.3
HMGB3P13-201ENST00000511263 TRIM56Q9BRZ2 755 aaKnown RBP6.96□□□□□ -1.3
HMGB3P13-201ENST00000511263 NOC4LQ9BVI4 516 aaKnown RBP6.96□□□□□ -1.3
HMGB3P13-201ENST00000511263 NRSN2Q9GZP1 204 aa6.96□□□□□ -1.3
HMGB3P13-201ENST00000511263 ADGRE2Q9UHX3 823 aa6.96□□□□□ -1.3
HMGB3P13-201ENST00000511263 DCAF1Q9Y4B6 1507 aa6.96□□□□□ -1.3
HMGB3P13-201ENST00000511263 WDR64B1ANS9 1081 aa6.95□□□□□ -1.3
HMGB3P13-201ENST00000511263 RPS26P62854 115 aaKnown RBP6.95□□□□□ -1.3
HMGB3P13-201ENST00000511263 SOX4Q06945 474 aaPredicted RBP6.95□□□□□ -1.3
HMGB3P13-201ENST00000511263 LLGL2Q6P1M3 1020 aa6.95□□□□□ -1.3
HMGB3P13-201ENST00000511263 MFSD14AQ96MC6 490 aa6.95□□□□□ -1.3
HMGB3P13-201ENST00000511263 ATXN3LQ9H3M9 355 aa6.95□□□□□ -1.3
HMGB3P13-201ENST00000511263 AOC2O75106 756 aa6.94□□□□□ -1.3
HMGB3P13-201ENST00000511263 TRIM37O94972 964 aa6.94□□□□□ -1.3
HMGB3P13-201ENST00000511263 RXRBP28702 533 aa6.94□□□□□ -1.3
HMGB3P13-201ENST00000511263 AKAP4Q5JQC9 854 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms