RNA–Protein interactions for RNA: ENST00000510626.5

HTT-208, Transcript of huntingtin, humanhuman

TSL 1 (best)

Gene HTT, Length 14,438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-208ENST00000510626 LMNB1P20700 586 aa9.35□□□□□ -0.91
HTT-208ENST00000510626 HVCN1Q96D96 273 aa9.35□□□□□ -0.91
HTT-208ENST00000510626 ZBTB40Q9NUA8 1239 aa9.35□□□□□ -0.91
HTT-208ENST00000510626 ATP8B2P98198 1209 aa9.35□□□□□ -0.91
HTT-208ENST00000510626 DBN1Q16643 649 aa9.35□□□□□ -0.91
HTT-208ENST00000510626 TRIML1Q8N9V2 468 aa9.35□□□□□ -0.91
HTT-208ENST00000510626 WWC3Q9ULE0 1092 aa9.35□□□□□ -0.91
HTT-208ENST00000510626 LRRD1A4D1F6 860 aa9.35□□□□□ -0.91
HTT-208ENST00000510626 MAN1A1P33908 653 aa9.35□□□□□ -0.91
HTT-208ENST00000510626 TXNDC16Q9P2K2 825 aa9.35□□□□□ -0.91
HTT-208ENST00000510626 VIMP08670 466 aaKnown RBP9.35□□□□□ -0.91
HTT-208ENST00000510626 TBC1D31Q96DN5 1066 aa9.35□□□□□ -0.91
HTT-208ENST00000510626 ACTR5Q9H9F9 607 aaPredicted RBP9.35□□□□□ -0.91
HTT-208ENST00000510626 EPB41P11171 864 aaKnown RBP9.35□□□□□ -0.91
HTT-208ENST00000510626 LIN9Q5TKA1 542 aa9.35□□□□□ -0.91
HTT-208ENST00000510626 ARHGAP18Q8N392 663 aa9.35□□□□□ -0.91
HTT-208ENST00000510626 ATP6V0A2Q9Y487 856 aa9.35□□□□□ -0.91
HTT-208ENST00000510626 UBA5Q9GZZ9 404 aa9.35□□□□□ -0.91
HTT-208ENST00000510626 VEZTQ9HBM0 779 aa9.35□□□□□ -0.91
HTT-208ENST00000510626 KCNG1Q9UIX4 513 aa9.35□□□□□ -0.91
HTT-208ENST00000510626 POLR1AO95602 1720 aaPredicted RBP9.34□□□□□ -0.91
HTT-208ENST00000510626 IDEP14735 1019 aa9.34□□□□□ -0.91
HTT-208ENST00000510626 TSPYL2Q9H2G4 693 aaPredicted RBP9.34□□□□□ -0.91
HTT-208ENST00000510626 KAT14Q9H8E8 782 aa9.34□□□□□ -0.91
HTT-208ENST00000510626 BATF3Q9NR55 127 aa9.34□□□□□ -0.91
HTT-208ENST00000510626 IGHDP01880 384 aa9.34□□□□□ -0.91
HTT-208ENST00000510626 MAGI1Q96QZ7 1491 aaPredicted RBP9.34□□□□□ -0.91
HTT-208ENST00000510626 KRT2P35908 639 aa9.34□□□□□ -0.91
HTT-208ENST00000510626 TPD52P55327 224 aaPredicted RBP9.34□□□□□ -0.91
HTT-208ENST00000510626 MGEA5O60502 916 aa9.34□□□□□ -0.91
HTT-208ENST00000510626 ATP2A3Q93084 1043 aa9.34□□□□□ -0.91
HTT-208ENST00000510626 MOV10L1Q9BXT6 1211 aaKnown RBP9.34□□□□□ -0.91
HTT-208ENST00000510626 MMRN2Q9H8L6 949 aa9.34□□□□□ -0.91
HTT-208ENST00000510626 SECISBP2LQ93073 1101 aaKnown RBP9.34□□□□□ -0.91
HTT-208ENST00000510626 THEMISQ8N1K5 641 aaPredicted RBP9.34□□□□□ -0.91
HTT-208ENST00000510626 TCP11Q8WWU5 503 aa9.34□□□□□ -0.91
HTT-208ENST00000510626 HOMER3Q9NSC5 361 aa9.34□□□□□ -0.91
HTT-208ENST00000510626 HAUS2Q9NVX0 235 aa9.34□□□□□ -0.91
HTT-208ENST00000510626 RHOXF2BP0C7M4 288 aa9.34□□□□□ -0.91
HTT-208ENST00000510626 OAS2P29728 719 aaKnown RBP9.34□□□□□ -0.91
HTT-208ENST00000510626 MAML3Q96JK9 1138 aa9.34□□□□□ -0.91
HTT-208ENST00000510626 RMDN2Q96LZ7 410 aa9.34□□□□□ -0.91
HTT-208ENST00000510626 RHOXF2Q9BQY4 288 aa9.34□□□□□ -0.91
HTT-208ENST00000510626 MBIPQ9NS73 344 aa9.34□□□□□ -0.91
HTT-208ENST00000510626 RNF40O75150 1001 aa9.34□□□□□ -0.91
HTT-208ENST00000510626 ATP2C2O75185 946 aa9.34□□□□□ -0.91
HTT-208ENST00000510626 LMOD1P29536 600 aaPredicted RBP9.34□□□□□ -0.91
HTT-208ENST00000510626 CCDC184Q52MB2 194 aa9.34□□□□□ -0.91
HTT-208ENST00000510626 IFIT1BQ5T764 474 aaKnown RBP9.34□□□□□ -0.91
HTT-208ENST00000510626 LEO1Q8WVC0 666 aaPredicted RBP9.34□□□□□ -0.91
HTT-208ENST00000510626 CAPS2Q9BXY5 557 aa9.34□□□□□ -0.91
HTT-208ENST00000510626 MAGEF1Q9HAY2 307 aa9.34□□□□□ -0.91
HTT-208ENST00000510626 MTMR7Q9Y216 660 aa9.34□□□□□ -0.91
HTT-208ENST00000510626 DAAM1Q9Y4D1 1078 aa9.34□□□□□ -0.91
HTT-208ENST00000510626 RBM8AQ9Y5S9 174 aaKnown RBP9.34□□□□□ -0.91
HTT-208ENST00000510626 SMARCA5O60264 1052 aaPredicted RBP9.33□□□□□ -0.92
HTT-208ENST00000510626 ALS2CLQ60I27 953 aa9.33□□□□□ -0.92
HTT-208ENST00000510626 KCNK9Q9NPC2 374 aa9.33□□□□□ -0.92
HTT-208ENST00000510626 IBSPP21815 317 aaPredicted RBP9.33□□□□□ -0.92
HTT-208ENST00000510626 NLRP12P59046 1061 aa9.33□□□□□ -0.92
HTT-208ENST00000510626 UBLCP1Q8WVY7 318 aaPredicted RBP9.33□□□□□ -0.92
HTT-208ENST00000510626 CAPZA3Q96KX2 299 aa9.33□□□□□ -0.92
HTT-208ENST00000510626 LZTS2Q9BRK4 669 aa9.33□□□□□ -0.92
HTT-208ENST00000510626 CACNA1FO60840 1977 aa9.33□□□□□ -0.92
HTT-208ENST00000510626 CTTNBP2Q8WZ74 1663 aa9.33□□□□□ -0.92
HTT-208ENST00000510626 ZNF830Q96NB3 372 aaPredicted RBP9.33□□□□□ -0.92
HTT-208ENST00000510626 MAK16Q9BXY0 300 aaKnown RBP9.33□□□□□ -0.92
HTT-208ENST00000510626 CCT2P78371 535 aaKnown RBP9.33□□□□□ -0.92
HTT-208ENST00000510626 IQGAP2Q13576 1575 aa9.33□□□□□ -0.92
HTT-208ENST00000510626 KDM2BQ8NHM5 1336 aa9.33□□□□□ -0.92
HTT-208ENST00000510626 GCKP35557 465 aa9.33□□□□□ -0.92
HTT-208ENST00000510626 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.33□□□□□ -0.92
HTT-208ENST00000510626 GDPD2Q9HCC8 539 aa9.33□□□□□ -0.92
HTT-208ENST00000510626 TMEM132EQ6IEE7 984 aa9.33□□□□□ -0.92
HTT-208ENST00000510626 MICU3Q86XE3 530 aa9.33□□□□□ -0.92
HTT-208ENST00000510626 RHPN1Q8TCX5 695 aa9.33□□□□□ -0.92
HTT-208ENST00000510626 C6orf50Q9HD87 102 aa9.33□□□□□ -0.92
HTT-208ENST00000510626 STX10O60499 249 aa9.33□□□□□ -0.92
HTT-208ENST00000510626 Q6ZUG5 572 aa9.33□□□□□ -0.92
HTT-208ENST00000510626 TROVE2P10155 538 aaKnown RBP eCLIP9.33□□□□□ -0.92
HTT-208ENST00000510626 BRF1Q92994 677 aa9.33□□□□□ -0.92
HTT-208ENST00000510626 DRC1Q96MC2 740 aa9.33□□□□□ -0.92
HTT-208ENST00000510626 MUM1Q2TAK8 710 aa9.33□□□□□ -0.92
HTT-208ENST00000510626 RBSNQ9H1K0 784 aa9.33□□□□□ -0.92
HTT-208ENST00000510626 IL15P40933 162 aaPredicted RBP9.33□□□□□ -0.92
HTT-208ENST00000510626 IRX1P78414 480 aaPredicted RBP9.33□□□□□ -0.92
HTT-208ENST00000510626 HSPA8P11142 646 aaKnown RBP9.32□□□□□ -0.92
HTT-208ENST00000510626 INF2Q27J81 1249 aa9.32□□□□□ -0.92
HTT-208ENST00000510626 SLC9C1Q4G0N8 1177 aa9.32□□□□□ -0.92
HTT-208ENST00000510626 CREB3L3Q68CJ9 461 aa9.32□□□□□ -0.92
HTT-208ENST00000510626 TM6SF1Q9BZW5 370 aa9.32□□□□□ -0.92
HTT-208ENST00000510626 ZRANB1Q9UGI0 708 aa9.32□□□□□ -0.92
HTT-208ENST00000510626 SATB2Q9UPW6 733 aa9.32□□□□□ -0.92
HTT-208ENST00000510626 CCDC169A6NNP5 214 aa9.32□□□□□ -0.92
HTT-208ENST00000510626 LMNAP02545 664 aaKnown RBP9.32□□□□□ -0.92
HTT-208ENST00000510626 DNA2P51530 1060 aa9.32□□□□□ -0.92
HTT-208ENST00000510626 MIER3Q7Z3K6 550 aa9.32□□□□□ -0.92
HTT-208ENST00000510626 IFT81Q8WYA0 676 aa9.32□□□□□ -0.92
HTT-208ENST00000510626 ZFP91Q96JP5 570 aaPredicted RBP9.32□□□□□ -0.92
HTT-208ENST00000510626 SAR1BQ9Y6B6 198 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 152.5 ms