RNA–Protein interactions for RNA: ENST00000510099.5

PDLIM5-214, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-214ENST00000510099 ANKRD18AQ8IVF6 992 aa5.62□□□□□ -1.51
PDLIM5-214ENST00000510099 CHMP4CQ96CF2 233 aa5.62□□□□□ -1.51
PDLIM5-214ENST00000510099 ZNF274Q96GC6 653 aaPredicted RBP5.62□□□□□ -1.51
PDLIM5-214ENST00000510099 GJD4Q96KN9 370 aaPredicted RBP5.62□□□□□ -1.51
PDLIM5-214ENST00000510099 STRBPQ96SI9 672 aaKnown RBP5.62□□□□□ -1.51
PDLIM5-214ENST00000510099 NYXQ9GZU5 481 aa5.62□□□□□ -1.51
PDLIM5-214ENST00000510099 EPB41L4AQ9HCS5 686 aaPredicted RBP5.62□□□□□ -1.51
PDLIM5-214ENST00000510099 BSDC1Q9NW68 430 aaPredicted RBP5.62□□□□□ -1.51
PDLIM5-214ENST00000510099 SRP68Q9UHB9 627 aaKnown RBP5.62□□□□□ -1.51
PDLIM5-214ENST00000510099 LHX6Q9UPM6 363 aa5.62□□□□□ -1.51
PDLIM5-214ENST00000510099 AFF2P51816 1311 aa5.62□□□□□ -1.51
PDLIM5-214ENST00000510099 PDS5AQ29RF7 1337 aaKnown RBP5.62□□□□□ -1.51
PDLIM5-214ENST00000510099 PNPLA7Q6ZV29 1317 aa5.62□□□□□ -1.51
PDLIM5-214ENST00000510099 C4BP0C0L5 1744 aa5.62□□□□□ -1.51
PDLIM5-214ENST00000510099 SYCE3A1L190 88 aa5.61□□□□□ -1.51
PDLIM5-214ENST00000510099 GOLGA8BA8MQT2 603 aa5.61□□□□□ -1.51
PDLIM5-214ENST00000510099 SNAP23O00161 211 aa5.61□□□□□ -1.51
PDLIM5-214ENST00000510099 SH2B2O14492 632 aaPredicted RBP5.61□□□□□ -1.51
PDLIM5-214ENST00000510099 DTNBO60941 627 aa5.61□□□□□ -1.51
PDLIM5-214ENST00000510099 MBD4O95243 580 aa5.61□□□□□ -1.51
PDLIM5-214ENST00000510099 C4AP0C0L4 1744 aa5.61□□□□□ -1.51
PDLIM5-214ENST00000510099 PDIA3P30101 505 aaKnown RBP5.61□□□□□ -1.51
PDLIM5-214ENST00000510099 MCM5P33992 734 aa5.61□□□□□ -1.51
PDLIM5-214ENST00000510099 NEDD4P46934 1319 aa5.61□□□□□ -1.51
PDLIM5-214ENST00000510099 BCAMP50895 628 aa5.61□□□□□ -1.51
PDLIM5-214ENST00000510099 KCNQ4P56696 695 aa5.61□□□□□ -1.51
PDLIM5-214ENST00000510099 HAND2P61296 217 aa5.61□□□□□ -1.51
PDLIM5-214ENST00000510099 KRT85P78386 507 aa5.61□□□□□ -1.51
PDLIM5-214ENST00000510099 MAP3K12Q12852 859 aa5.61□□□□□ -1.51
PDLIM5-214ENST00000510099 NID2Q14112 1375 aa5.61□□□□□ -1.51
PDLIM5-214ENST00000510099 FOXD4L6Q3SYB3 417 aaPredicted RBP5.61□□□□□ -1.51
PDLIM5-214ENST00000510099 FOXD4L3Q6VB84 417 aaPredicted RBP5.61□□□□□ -1.51
PDLIM5-214ENST00000510099 RALYLQ86SE5 291 aaKnown RBP5.61□□□□□ -1.51
PDLIM5-214ENST00000510099 AMIGO3Q86WK7 504 aa5.61□□□□□ -1.51
PDLIM5-214ENST00000510099 MAGEB6Q8N7X4 407 aa5.61□□□□□ -1.51
PDLIM5-214ENST00000510099 CARMIL3Q8ND23 1372 aa5.61□□□□□ -1.51
PDLIM5-214ENST00000510099 NCOA7Q8NI08 942 aa5.61□□□□□ -1.51
PDLIM5-214ENST00000510099 CERKQ8TCT0 537 aa5.61□□□□□ -1.51
PDLIM5-214ENST00000510099 KAT6BQ8WYB5 2073 aa5.61□□□□□ -1.51
PDLIM5-214ENST00000510099 AIDAQ96BJ3 306 aa5.61□□□□□ -1.51
PDLIM5-214ENST00000510099 TNRC6CQ9HCJ0 1690 aaKnown RBP5.61□□□□□ -1.51
PDLIM5-214ENST00000510099 RTCBQ9Y3I0 505 aaKnown RBP5.61□□□□□ -1.51
PDLIM5-214ENST00000510099 KIF3AQ9Y496 699 aa5.61□□□□□ -1.51
PDLIM5-214ENST00000510099 IRS2Q9Y4H2 1338 aa5.6□□□□□ -1.51
PDLIM5-214ENST00000510099 KLF18A0A0U1RQI7 1052 aa5.6□□□□□ -1.51
PDLIM5-214ENST00000510099 ZNF213O14771 459 aa5.6□□□□□ -1.51
PDLIM5-214ENST00000510099 SEMA3EO15041 775 aa5.6□□□□□ -1.51
PDLIM5-214ENST00000510099 ZPR1O75312 459 aa5.6□□□□□ -1.51
PDLIM5-214ENST00000510099 GNAT2P19087 354 aa5.6□□□□□ -1.51
PDLIM5-214ENST00000510099 HSPA1LP34931 641 aa5.6□□□□□ -1.51
PDLIM5-214ENST00000510099 CCDC173Q0VFZ6 552 aa5.6□□□□□ -1.51
PDLIM5-214ENST00000510099 MEX3CQ5U5Q3 659 aaKnown RBP5.6□□□□□ -1.51
PDLIM5-214ENST00000510099 POTEEQ6S8J3 1075 aa5.6□□□□□ -1.51
PDLIM5-214ENST00000510099 BICDL1Q6ZP65 573 aa5.6□□□□□ -1.51
PDLIM5-214ENST00000510099 TTC6Q86TZ1 520 aa5.6□□□□□ -1.51
PDLIM5-214ENST00000510099 FERMT3Q86UX7 667 aa5.6□□□□□ -1.51
PDLIM5-214ENST00000510099 NBPF5PQ86XG9 351 aaPredicted RBP5.6□□□□□ -1.51
PDLIM5-214ENST00000510099 SEPT12Q8IYM1 358 aa5.6□□□□□ -1.51
PDLIM5-214ENST00000510099 FAM43AQ8N2R8 423 aa5.6□□□□□ -1.51
PDLIM5-214ENST00000510099 RGS22Q8NE09 1264 aa5.6□□□□□ -1.51
PDLIM5-214ENST00000510099 CELF1Q92879 486 aaKnown RBP5.6□□□□□ -1.51
PDLIM5-214ENST00000510099 RNF25Q96BH1 459 aaPredicted RBP5.6□□□□□ -1.51
PDLIM5-214ENST00000510099 PPP1R9BQ96SB3 815 aa5.6□□□□□ -1.51
PDLIM5-214ENST00000510099 SETDB2Q96T68 719 aa5.6□□□□□ -1.51
PDLIM5-214ENST00000510099 BCL11BQ9C0K0 894 aaPredicted RBP5.6□□□□□ -1.51
PDLIM5-214ENST00000510099 SCAND2PQ9GZW5 306 aaPredicted RBP5.6□□□□□ -1.51
PDLIM5-214ENST00000510099 RBSNQ9H1K0 784 aa5.6□□□□□ -1.51
PDLIM5-214ENST00000510099 TSPY26PQ9H489 355 aa5.6□□□□□ -1.51
PDLIM5-214ENST00000510099 ZSCAN16Q9H4T2 348 aaPredicted RBP5.6□□□□□ -1.51
PDLIM5-214ENST00000510099 NCOA5Q9HCD5 579 aaKnown RBP5.6□□□□□ -1.51
PDLIM5-214ENST00000510099 GPHNQ9NQX3 736 aaPredicted RBP5.6□□□□□ -1.51
PDLIM5-214ENST00000510099 GNL3LQ9NVN8 582 aaKnown RBP5.6□□□□□ -1.51
PDLIM5-214ENST00000510099 TRPC5Q9UL62 973 aaPredicted RBP5.6□□□□□ -1.51
PDLIM5-214ENST00000510099 MINPP1Q9UNW1 487 aa5.6□□□□□ -1.51
PDLIM5-214ENST00000510099 HPS5Q9UPZ3 1129 aa5.6□□□□□ -1.51
PDLIM5-214ENST00000510099 TAF1LQ8IZX4 1826 aa5.6□□□□□ -1.51
PDLIM5-214ENST00000510099 MAST2Q6P0Q8 1798 aa5.6□□□□□ -1.51
PDLIM5-214ENST00000510099 DUOX1Q9NRD9 1551 aa5.59□□□□□ -1.51
PDLIM5-214ENST00000510099 C2orf72A6NCS6 295 aa5.59□□□□□ -1.51
PDLIM5-214ENST00000510099 GSG1L2A8MUP6 293 aa5.59□□□□□ -1.51
PDLIM5-214ENST00000510099 PATL2C9JE40 543 aaKnown RBP5.59□□□□□ -1.51
PDLIM5-214ENST00000510099 H3BQV1 296 aa5.59□□□□□ -1.51
PDLIM5-214ENST00000510099 DHX16O60231 1041 aaKnown RBP5.59□□□□□ -1.51
PDLIM5-214ENST00000510099 LETM1O95202 739 aaPredicted RBP5.59□□□□□ -1.51
PDLIM5-214ENST00000510099 FDPSP14324 419 aaKnown RBP5.59□□□□□ -1.51
PDLIM5-214ENST00000510099 GYG1P46976 350 aa5.59□□□□□ -1.51
PDLIM5-214ENST00000510099 CCT2P78371 535 aaKnown RBP5.59□□□□□ -1.51
PDLIM5-214ENST00000510099 TRDNQ13061 729 aa5.59□□□□□ -1.51
PDLIM5-214ENST00000510099 FAM182BQ5T319 152 aa5.59□□□□□ -1.51
PDLIM5-214ENST00000510099 IFFO2Q5TF58 517 aa5.59□□□□□ -1.51
PDLIM5-214ENST00000510099 TMED8Q6PL24 325 aaPredicted RBP5.59□□□□□ -1.51
PDLIM5-214ENST00000510099 SMIM5Q71RC9 77 aa5.59□□□□□ -1.51
PDLIM5-214ENST00000510099 CYB5R4Q7L1T6 521 aa5.59□□□□□ -1.51
PDLIM5-214ENST00000510099 CHST3Q7LGC8 479 aa5.59□□□□□ -1.51
PDLIM5-214ENST00000510099 FBXO33Q7Z6M2 555 aa5.59□□□□□ -1.51
PDLIM5-214ENST00000510099 SGMS1Q86VZ5 419 aa5.59□□□□□ -1.51
PDLIM5-214ENST00000510099 IFNL3Q8IZI9 196 aa5.59□□□□□ -1.51
PDLIM5-214ENST00000510099 LCORLQ8N3X6 602 aa5.59□□□□□ -1.51
PDLIM5-214ENST00000510099 FAM184AQ8NB25 1140 aa5.59□□□□□ -1.51
PDLIM5-214ENST00000510099 NKX2-3Q8TAU0 364 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 105.3 ms