RNA–Protein interactions for RNA: ENST00000508500.1

LMNA-222, Transcript of lamin A/C, humanhuman

TSL 1 (best)

Gene LMNA, Length 848 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-222ENST00000508500 GNAI2P04899 355 aa20.13■□□□□ 0.81
LMNA-222ENST00000508500 INHBEP58166 350 aa20.13■□□□□ 0.81
LMNA-222ENST00000508500 ZKSCAN2Q63HK3 967 aa20.13■□□□□ 0.81
LMNA-222ENST00000508500 OPTNQ96CV9 577 aa20.13■□□□□ 0.81
LMNA-222ENST00000508500 DENND2AQ9ULE3 1009 aa20.13■□□□□ 0.81
LMNA-222ENST00000508500 DOCK2Q92608 1830 aa20.13■□□□□ 0.81
LMNA-222ENST00000508500 MAP3K9P80192 1104 aa20.12■□□□□ 0.81
LMNA-222ENST00000508500 RASGRF1Q13972 1273 aa20.12■□□□□ 0.81
LMNA-222ENST00000508500 VGLL4Q14135 290 aa20.12■□□□□ 0.81
LMNA-222ENST00000508500 CDC42EP5Q6NZY7 148 aa20.12■□□□□ 0.81
LMNA-222ENST00000508500 XAGE2Q96GT9 111 aa20.12■□□□□ 0.81
LMNA-222ENST00000508500 MS4A4AQ96JQ5 239 aa20.12■□□□□ 0.81
LMNA-222ENST00000508500 GNL3LQ9NVN8 582 aaKnown RBP20.12■□□□□ 0.81
LMNA-222ENST00000508500 RPAP1Q9BWH6 1393 aaPredicted RBP20.11■□□□□ 0.81
LMNA-222ENST00000508500 LDHBP07195 334 aaKnown RBP20.11■□□□□ 0.81
LMNA-222ENST00000508500 NFIAQ12857 509 aa20.11■□□□□ 0.81
LMNA-222ENST00000508500 ALDH1A1P00352 501 aa20.1■□□□□ 0.81
LMNA-222ENST00000508500 RLBP1P12271 317 aa20.1■□□□□ 0.81
LMNA-222ENST00000508500 FBXO46Q6PJ61 603 aaPredicted RBP20.1■□□□□ 0.81
LMNA-222ENST00000508500 TMOD2Q9NZR1 351 aa20.1■□□□□ 0.81
LMNA-222ENST00000508500 SNCAIPQ9Y6H5 919 aa20.1■□□□□ 0.81
LMNA-222ENST00000508500 CENPFP49454 3210 aa20.1■□□□□ 0.81
LMNA-222ENST00000508500 FKTNO75072 461 aa20.09■□□□□ 0.81
LMNA-222ENST00000508500 POLA2Q14181 598 aa20.09■□□□□ 0.81
LMNA-222ENST00000508500 FAM151AQ8WW52 585 aa20.09■□□□□ 0.81
LMNA-222ENST00000508500 FAM198AQ9UFP1 575 aa20.09■□□□□ 0.81
LMNA-222ENST00000508500 MKI67P46013 3256 aaKnown RBP20.08■□□□□ 0.81
LMNA-222ENST00000508500 PDS5AQ29RF7 1337 aaKnown RBP20.08■□□□□ 0.81
LMNA-222ENST00000508500 CDK5RAP2Q96SN8 1893 aa20.08■□□□□ 0.81
LMNA-222ENST00000508500 TCP10Q12799 353 aa20.08■□□□□ 0.81
LMNA-222ENST00000508500 MIGA2Q7L4E1 593 aa20.08■□□□□ 0.81
LMNA-222ENST00000508500 ZFPM1Q8IX07 1006 aa20.08■□□□□ 0.81
LMNA-222ENST00000508500 ZNF384Q8TF68 577 aa20.08■□□□□ 0.81
LMNA-222ENST00000508500 BRI3BPQ8WY22 251 aa20.08■□□□□ 0.81
LMNA-222ENST00000508500 ZKSCAN4Q969J2 545 aaPredicted RBP20.08■□□□□ 0.81
LMNA-222ENST00000508500 AKAP2Q9Y2D5 859 aa20.08■□□□□ 0.81
LMNA-222ENST00000508500 GAKO14976 1311 aa20.07■□□□□ 0.8
LMNA-222ENST00000508500 ZBED9Q6R2W3 1325 aa20.07■□□□□ 0.8
LMNA-222ENST00000508500 ZSWIM8A7E2V4 1837 aa20.07■□□□□ 0.8
LMNA-222ENST00000508500 CAP1Q01518 475 aa20.07■□□□□ 0.8
LMNA-222ENST00000508500 CRHR2Q13324 411 aa20.07■□□□□ 0.8
LMNA-222ENST00000508500 PI16Q6UXB8 463 aa20.07■□□□□ 0.8
LMNA-222ENST00000508500 NEUROD6Q96NK8 337 aa20.07■□□□□ 0.8
LMNA-222ENST00000508500 WRNIP1Q96S55 665 aa20.07■□□□□ 0.8
LMNA-222ENST00000508500 C1orf115Q9H7X2 142 aa20.07■□□□□ 0.8
LMNA-222ENST00000508500 USP40Q9NVE5 1235 aa20.07■□□□□ 0.8
LMNA-222ENST00000508500 RFX7Q2KHR2 1363 aa20.07■□□□□ 0.8
LMNA-222ENST00000508500 SPDYE5A6NIY4 337 aa20.06■□□□□ 0.8
LMNA-222ENST00000508500 ZBTB7BO15156 539 aaPredicted RBP20.06■□□□□ 0.8
LMNA-222ENST00000508500 ATP8B2P98198 1209 aa20.06■□□□□ 0.8
LMNA-222ENST00000508500 SSH3Q8TE77 659 aa20.06■□□□□ 0.8
LMNA-222ENST00000508500 OTUD5Q96G74 571 aa20.06■□□□□ 0.8
LMNA-222ENST00000508500 HMG20BQ9P0W2 317 aa20.06■□□□□ 0.8
LMNA-222ENST00000508500 ABCF2Q9UG63 623 aa20.06■□□□□ 0.8
LMNA-222ENST00000508500 CSADQ9Y600 493 aa20.06■□□□□ 0.8
LMNA-222ENST00000508500 PHIPQ8WWQ0 1821 aa20.06■□□□□ 0.8
LMNA-222ENST00000508500 PTPRFP10586 1907 aa20.06■□□□□ 0.8
LMNA-222ENST00000508500 INPP5BP32019 993 aa20.05■□□□□ 0.8
LMNA-222ENST00000508500 G3BP1Q13283 466 aaKnown RBP eCLIP20.05■□□□□ 0.87e-9■■□□□ 11.5
LMNA-222ENST00000508500 MVPQ14764 893 aaKnown RBP20.05■□□□□ 0.8
LMNA-222ENST00000508500 ZNF112Q9UJU3 913 aa20.05■□□□□ 0.8
LMNA-222ENST00000508500 CCL15-CCL14A0A0B4J2E2 113 aa20.04■□□□□ 0.8
LMNA-222ENST00000508500 CCL15Q16663 113 aa20.04■□□□□ 0.8
LMNA-222ENST00000508500 PRPF38BQ5VTL8 546 aaKnown RBP20.04■□□□□ 0.8
LMNA-222ENST00000508500 SH3BP5LQ7L8J4 393 aa20.04■□□□□ 0.8
LMNA-222ENST00000508500 FAM43AQ8N2R8 423 aa20.04■□□□□ 0.8
LMNA-222ENST00000508500 ZGPATQ8N5A5 531 aaKnown RBP20.04■□□□□ 0.8
LMNA-222ENST00000508500 FAM163AQ96GL9 167 aaPredicted RBP20.04■□□□□ 0.8
LMNA-222ENST00000508500 ZNF341Q9BYN7 854 aa20.04■□□□□ 0.8
LMNA-222ENST00000508500 ATRNL1Q5VV63 1379 aa20.04■□□□□ 0.8
LMNA-222ENST00000508500 BRCA2P51587 3418 aa20.04■□□□□ 0.8
LMNA-222ENST00000508500 IRF6O14896 467 aa20.03■□□□□ 0.8
LMNA-222ENST00000508500 SLURP2P0DP57 97 aa20.03■□□□□ 0.8
LMNA-222ENST00000508500 ARID4AP29374 1257 aaPredicted RBP20.03■□□□□ 0.8
LMNA-222ENST00000508500 RGS3P49796 1198 aa20.03■□□□□ 0.8
LMNA-222ENST00000508500 DCAF15Q66K64 600 aa20.03■□□□□ 0.8
LMNA-222ENST00000508500 TBC1D9Q6ZT07 1266 aa20.03■□□□□ 0.8
LMNA-222ENST00000508500 ERO1BQ86YB8 467 aa20.03■□□□□ 0.8
LMNA-222ENST00000508500 IDI2Q9BXS1 227 aa20.03■□□□□ 0.8
LMNA-222ENST00000508500 WDHD1O75717 1129 aaPredicted RBP20.02■□□□□ 0.8
LMNA-222ENST00000508500 MCAMP43121 646 aa20.02■□□□□ 0.8
LMNA-222ENST00000508500 GTF2A2P52657 109 aa20.02■□□□□ 0.8
LMNA-222ENST00000508500 MECOMQ03112 1051 aa20.02■□□□□ 0.8
LMNA-222ENST00000508500 OTUD7BQ6GQQ9 843 aa20.02■□□□□ 0.8
LMNA-222ENST00000508500 OTOP1Q7RTM1 612 aa20.02■□□□□ 0.8
LMNA-222ENST00000508500 SPATA5Q8NB90 893 aa20.02■□□□□ 0.8
LMNA-222ENST00000508500 HOOK2Q96ED9 719 aa20.02■□□□□ 0.8
LMNA-222ENST00000508500 DDX4Q9NQI0 724 aaKnown RBP20.02■□□□□ 0.8
LMNA-222ENST00000508500 DOCK1Q14185 1865 aa20.02■□□□□ 0.8
LMNA-222ENST00000508500 FOCADQ5VW36 1801 aa20.02■□□□□ 0.79
LMNA-222ENST00000508500 MAST2Q6P0Q8 1798 aa20.01■□□□□ 0.79
LMNA-222ENST00000508500 BTDP43251 543 aa20.01■□□□□ 0.79
LMNA-222ENST00000508500 DZIP1Q86YF9 867 aaKnown RBP20.01■□□□□ 0.79
LMNA-222ENST00000508500 ITPRIPQ8IWB1 547 aa20.01■□□□□ 0.79
LMNA-222ENST00000508500 CD99L2Q8TCZ2 262 aa20.01■□□□□ 0.79
LMNA-222ENST00000508500 ATAD5Q96QE3 1844 aa20.01■□□□□ 0.79
LMNA-222ENST00000508500 MROH7-TTC4A0A0A0MT08 1334 aa20.01■□□□□ 0.79
LMNA-222ENST00000508500 SIPA1L1O43166 1804 aa20■□□□□ 0.79
LMNA-222ENST00000508500 GPR75-ASB3A0A0A6YYF3 556 aa20■□□□□ 0.79
LMNA-222ENST00000508500 ENTPD3O75355 529 aa20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 131 ms