RNA–Protein interactions for RNA: ENST00000508473.5

SRPK1-210, Transcript of SRSF protein kinase 1, humanhuman

TSL 2

Gene SRPK1, Length 858 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-210ENST00000508473 LBX1P52954 281 aa29.64■■■□□ 2.34
SRPK1-210ENST00000508473 CDC42EP5Q6NZY7 148 aa29.64■■■□□ 2.34
SRPK1-210ENST00000508473 ERICH6Q7L0X2 663 aa29.64■■■□□ 2.34
SRPK1-210ENST00000508473 TSKSQ9UJT2 592 aa29.64■■■□□ 2.34
SRPK1-210ENST00000508473 HSPA8P11142 646 aaKnown RBP29.63■■■□□ 2.33
SRPK1-210ENST00000508473 MKRN3Q13064 507 aaKnown RBP29.63■■■□□ 2.33
SRPK1-210ENST00000508473 HSP90AB4PQ58FF6 505 aa29.63■■■□□ 2.33
SRPK1-210ENST00000508473 LDLRAD1Q5T700 205 aa29.63■■■□□ 2.33
SRPK1-210ENST00000508473 IL1RAPL2Q9NP60 686 aa29.63■■■□□ 2.33
SRPK1-210ENST00000508473 USP2O75604 605 aaPredicted RBP29.62■■■□□ 2.33
SRPK1-210ENST00000508473 RHPN1Q8TCX5 695 aa29.62■■■□□ 2.33
SRPK1-210ENST00000508473 BCL11AQ9H165 835 aa29.62■■■□□ 2.33
SRPK1-210ENST00000508473 USP40Q9NVE5 1235 aa29.62■■■□□ 2.33
SRPK1-210ENST00000508473 MECOMQ03112 1051 aa29.61■■■□□ 2.33
SRPK1-210ENST00000508473 MAP3K11Q16584 847 aa29.61■■■□□ 2.33
SRPK1-210ENST00000508473 AACSQ86V21 672 aa29.61■■■□□ 2.33
SRPK1-210ENST00000508473 CLMNQ96JQ2 1002 aa29.61■■■□□ 2.33
SRPK1-210ENST00000508473 IREB2P48200 963 aaKnown RBP29.6■■■□□ 2.33
SRPK1-210ENST00000508473 FKBP1CQ5VVH2 108 aa29.6■■■□□ 2.33
SRPK1-210ENST00000508473 RAI14Q9P0K7 980 aa29.6■■■□□ 2.33
SRPK1-210ENST00000508473 RRP1P56182 461 aaKnown RBP29.59■■■□□ 2.33
SRPK1-210ENST00000508473 TCP10Q12799 353 aa29.59■■■□□ 2.33
SRPK1-210ENST00000508473 NFIAQ12857 509 aa29.59■■■□□ 2.33
SRPK1-210ENST00000508473 FAM83AQ86UY5 434 aa29.59■■■□□ 2.33
SRPK1-210ENST00000508473 CSRNP1Q96S65 589 aa29.59■■■□□ 2.33
SRPK1-210ENST00000508473 GAKO14976 1311 aa29.59■■■□□ 2.33
SRPK1-210ENST00000508473 SLF2Q8IX21 1173 aa29.58■■■□□ 2.33
SRPK1-210ENST00000508473 ZNF384Q8TF68 577 aa29.58■■■□□ 2.33
SRPK1-210ENST00000508473 SLC10A4Q96EP9 437 aa29.58■■■□□ 2.33
SRPK1-210ENST00000508473 LRP2BPQ9P2M1 347 aa29.58■■■□□ 2.33
SRPK1-210ENST00000508473 MROH7-TTC4A0A0A0MT08 1334 aa29.56■■■□□ 2.32
SRPK1-210ENST00000508473 BTDP43251 543 aa29.56■■■□□ 2.32
SRPK1-210ENST00000508473 ZAP70P43403 619 aa29.56■■■□□ 2.32
SRPK1-210ENST00000508473 NSUN4Q96CB9 384 aaKnown RBP29.56■■■□□ 2.32
SRPK1-210ENST00000508473 KIF1BPQ96EK5 621 aa29.56■■■□□ 2.32
SRPK1-210ENST00000508473 FAM163AQ96GL9 167 aaPredicted RBP29.56■■■□□ 2.32
SRPK1-210ENST00000508473 ZNF512BQ96KM6 892 aaPredicted RBP29.56■■■□□ 2.32
SRPK1-210ENST00000508473 PRDM10Q9NQV6 1147 aa29.56■■■□□ 2.32
SRPK1-210ENST00000508473 CA12O43570 354 aa29.55■■■□□ 2.32
SRPK1-210ENST00000508473 CYP2E1P05181 493 aaPredicted RBP29.55■■■□□ 2.32
SRPK1-210ENST00000508473 FAM151AQ8WW52 585 aa29.55■■■□□ 2.32
SRPK1-210ENST00000508473 FAM198AQ9UFP1 575 aa29.55■■■□□ 2.32
SRPK1-210ENST00000508473 MYH2Q9UKX2 1941 aa29.54■■■□□ 2.32
SRPK1-210ENST00000508473 SPRYD7Q5W111 196 aa29.54■■■□□ 2.32
SRPK1-210ENST00000508473 ANKRD13AQ8IZ07 590 aa29.54■■■□□ 2.32
SRPK1-210ENST00000508473 CLASRPQ8N2M8 674 aaKnown RBP29.54■■■□□ 2.32
SRPK1-210ENST00000508473 RAB11FIP3O75154 756 aa29.53■■■□□ 2.32
SRPK1-210ENST00000508473 GSTO1P78417 241 aa29.53■■■□□ 2.32
SRPK1-210ENST00000508473 ZFPM1Q8IX07 1006 aa29.53■■■□□ 2.32
SRPK1-210ENST00000508473 NDUFB9Q9Y6M9 179 aa29.53■■■□□ 2.32
SRPK1-210ENST00000508473 GPR75-ASB3A0A0A6YYF3 556 aa29.52■■■□□ 2.32
SRPK1-210ENST00000508473 LDHCP07864 332 aa29.52■■■□□ 2.32
SRPK1-210ENST00000508473 PIH1D3Q9NQM4 214 aaKnown RBP29.52■■■□□ 2.32
SRPK1-210ENST00000508473 RNF186Q9NXI6 227 aa29.52■■■□□ 2.32
SRPK1-210ENST00000508473 TRPA1O75762 1119 aa29.51■■■□□ 2.31
SRPK1-210ENST00000508473 RGS3P49796 1198 aa29.51■■■□□ 2.31
SRPK1-210ENST00000508473 MIGA2Q7L4E1 593 aa29.51■■■□□ 2.31
SRPK1-210ENST00000508473 REM2Q8IYK8 340 aaPredicted RBP29.51■■■□□ 2.31
SRPK1-210ENST00000508473 WNK4Q96J92 1243 aa29.51■■■□□ 2.31
SRPK1-210ENST00000508473 ELP3Q9H9T3 547 aa29.51■■■□□ 2.31
SRPK1-210ENST00000508473 RPAP1Q9BWH6 1393 aaPredicted RBP29.51■■■□□ 2.31
SRPK1-210ENST00000508473 UNCXA6NJT0 531 aa29.5■■■□□ 2.31
SRPK1-210ENST00000508473 IFIT2P09913 472 aaKnown RBP29.5■■■□□ 2.31
SRPK1-210ENST00000508473 MAP3K9P80192 1104 aa29.5■■■□□ 2.31
SRPK1-210ENST00000508473 PPP1R3FQ6ZSY5 799 aaPredicted RBP29.5■■■□□ 2.31
SRPK1-210ENST00000508473 TNS4Q8IZW8 715 aa29.5■■■□□ 2.31
SRPK1-210ENST00000508473 WDHD1O75717 1129 aaPredicted RBP29.49■■■□□ 2.31
SRPK1-210ENST00000508473 PICALMQ13492 652 aa29.49■■■□□ 2.31
SRPK1-210ENST00000508473 NAA16Q6N069 864 aaPredicted RBP29.49■■■□□ 2.31
SRPK1-210ENST00000508473 DDX55Q8NHQ9 600 aaKnown RBP eCLIP29.49■■■□□ 2.31
SRPK1-210ENST00000508473 HOOK2Q96ED9 719 aa29.49■■■□□ 2.31
SRPK1-210ENST00000508473 IDI2Q9BXS1 227 aa29.49■■■□□ 2.31
SRPK1-210ENST00000508473 AKAP11Q9UKA4 1901 aa29.49■■■□□ 2.31
SRPK1-210ENST00000508473 RHBDL3P58872 404 aa29.48■■■□□ 2.31
SRPK1-210ENST00000508473 VGLL4Q14135 290 aa29.48■■■□□ 2.31
SRPK1-210ENST00000508473 DCAF15Q66K64 600 aa29.48■■■□□ 2.31
SRPK1-210ENST00000508473 DDX4Q9NQI0 724 aaKnown RBP29.48■■■□□ 2.31
SRPK1-210ENST00000508473 GJA5P36382 358 aa29.47■■■□□ 2.31
SRPK1-210ENST00000508473 WRNIP1Q96S55 665 aa29.47■■■□□ 2.31
SRPK1-210ENST00000508473 CRBNQ96SW2 442 aa29.47■■■□□ 2.31
SRPK1-210ENST00000508473 SAGE1Q9NXZ1 904 aa29.47■■■□□ 2.31
SRPK1-210ENST00000508473 CSADQ9Y600 493 aa29.47■■■□□ 2.31
SRPK1-210ENST00000508473 ENTPD3O75355 529 aa29.46■■■□□ 2.31
SRPK1-210ENST00000508473 SREBF2Q12772 1141 aa29.46■■■□□ 2.31
SRPK1-210ENST00000508473 ZSCAN29Q8IWY8 852 aaPredicted RBP29.46■■■□□ 2.31
SRPK1-210ENST00000508473 CNKSR2Q8WXI2 1034 aa29.46■■■□□ 2.31
SRPK1-210ENST00000508473 ZNF341Q9BYN7 854 aa29.46■■■□□ 2.31
SRPK1-210ENST00000508473 ANTXR1Q9H6X2 564 aa29.46■■■□□ 2.31
SRPK1-210ENST00000508473 RFX7Q2KHR2 1363 aa29.46■■■□□ 2.31
SRPK1-210ENST00000508473 SMARCA5O60264 1052 aaPredicted RBP29.45■■■□□ 2.31
SRPK1-210ENST00000508473 IDH1O75874 414 aaKnown RBP29.45■■■□□ 2.31
SRPK1-210ENST00000508473 ZBTB48P10074 688 aaPredicted RBP29.45■■■□□ 2.31
SRPK1-210ENST00000508473 TM4SF4P48230 202 aa29.45■■■□□ 2.31
SRPK1-210ENST00000508473 SH3BP5LQ7L8J4 393 aa29.45■■■□□ 2.31
SRPK1-210ENST00000508473 ZKSCAN4Q969J2 545 aaPredicted RBP29.45■■■□□ 2.31
SRPK1-210ENST00000508473 OPTNQ96CV9 577 aa29.45■■■□□ 2.31
SRPK1-210ENST00000508473 NOL10Q9BSC4 688 aaKnown RBP29.45■■■□□ 2.31
SRPK1-210ENST00000508473 LRRCC1Q9C099 1032 aa29.45■■■□□ 2.31
SRPK1-210ENST00000508473 PCDHB15Q9Y5E8 787 aa29.45■■■□□ 2.31
SRPK1-210ENST00000508473 ADGRA1Q86SQ6 560 aa29.44■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms