RNA–Protein interactions for RNA: ENST00000504195.1

HMGB3P17-201, Transcript of high mobility group box 3 pseudogene 17, humanhuman

BASIC

Gene HMGB3P17, Length 649 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P17-201ENST00000504195 SEZ6L2Q6UXD5 910 aa4.9□□□□□ -1.63
HMGB3P17-201ENST00000504195 ABTB2Q8N961 1025 aa4.9□□□□□ -1.63
HMGB3P17-201ENST00000504195 TMEM102Q8N9M5 508 aaPredicted RBP4.9□□□□□ -1.63
HMGB3P17-201ENST00000504195 PPP1R12CQ9BZL4 782 aa4.9□□□□□ -1.63
HMGB3P17-201ENST00000504195 ZFYVE1Q9HBF4 777 aa4.9□□□□□ -1.63
HMGB3P17-201ENST00000504195 DZANK1Q9NVP4 752 aa4.9□□□□□ -1.63
HMGB3P17-201ENST00000504195 ACPPP15309 386 aa4.89□□□□□ -1.63
HMGB3P17-201ENST00000504195 IRF2BPLQ9H1B7 796 aa4.89□□□□□ -1.63
HMGB3P17-201ENST00000504195 EPB41L4BQ9H329 900 aa4.89□□□□□ -1.63
HMGB3P17-201ENST00000504195 ELP3Q9H9T3 547 aa4.89□□□□□ -1.63
HMGB3P17-201ENST00000504195 MKNK2Q9HBH9 465 aa4.89□□□□□ -1.63
HMGB3P17-201ENST00000504195 DCP1AQ9NPI6 582 aaPredicted RBP4.89□□□□□ -1.63
HMGB3P17-201ENST00000504195 CNTNAP4Q9C0A0 1308 aa4.89□□□□□ -1.63
HMGB3P17-201ENST00000504195 ADRB1P08588 477 aa4.88□□□□□ -1.63
HMGB3P17-201ENST00000504195 MED14OSP0DP75 135 aa4.88□□□□□ -1.63
HMGB3P17-201ENST00000504195 XKR5Q6UX68 686 aa4.88□□□□□ -1.63
HMGB3P17-201ENST00000504195 CYFIP1Q7L576 1253 aa4.88□□□□□ -1.63
HMGB3P17-201ENST00000504195 ZNF438Q7Z4V0 828 aa4.88□□□□□ -1.63
HMGB3P17-201ENST00000504195 VN1R5Q7Z5H4 357 aa4.88□□□□□ -1.63
HMGB3P17-201ENST00000504195 GPR152Q8TDT2 470 aa4.88□□□□□ -1.63
HMGB3P17-201ENST00000504195 ASB11Q8WXH4 323 aa4.88□□□□□ -1.63
HMGB3P17-201ENST00000504195 SMG5Q9UPR3 1016 aaKnown RBP4.88□□□□□ -1.63
HMGB3P17-201ENST00000504195 SUV39H1O43463 412 aa4.87□□□□□ -1.63
HMGB3P17-201ENST00000504195 TRPA1O75762 1119 aa4.87□□□□□ -1.63
HMGB3P17-201ENST00000504195 ITIH2P19823 946 aa4.87□□□□□ -1.63
HMGB3P17-201ENST00000504195 CES1P23141 567 aa4.87□□□□□ -1.63
HMGB3P17-201ENST00000504195 GLDCP23378 1020 aa4.87□□□□□ -1.63
HMGB3P17-201ENST00000504195 CDK5R2Q13319 367 aa4.87□□□□□ -1.63
HMGB3P17-201ENST00000504195 HHIPQ96QV1 700 aa4.87□□□□□ -1.63
HMGB3P17-201ENST00000504195 SAP130Q9H0E3 1048 aa4.87□□□□□ -1.63
HMGB3P17-201ENST00000504195 STIM2Q9P246 746 aa4.87□□□□□ -1.63
HMGB3P17-201ENST00000504195 PITPNM2Q9BZ72 1349 aa4.87□□□□□ -1.63
HMGB3P17-201ENST00000504195 ESRRAP11474 423 aaPredicted RBP4.86□□□□□ -1.63
HMGB3P17-201ENST00000504195 LMOD1P29536 600 aaPredicted RBP4.86□□□□□ -1.63
HMGB3P17-201ENST00000504195 ASAP3Q8TDY4 903 aa4.86□□□□□ -1.63
HMGB3P17-201ENST00000504195 NXPE3Q969Y0 559 aa4.86□□□□□ -1.63
HMGB3P17-201ENST00000504195 TMEM63CQ9P1W3 806 aa4.86□□□□□ -1.63
HMGB3P17-201ENST00000504195 ETV2O00321 342 aaPredicted RBP4.85□□□□□ -1.63
HMGB3P17-201ENST00000504195 TNFRSF10BO14763 440 aa4.85□□□□□ -1.63
HMGB3P17-201ENST00000504195 CYP11A1P05108 521 aa4.85□□□□□ -1.63
HMGB3P17-201ENST00000504195 PCSK2P16519 638 aa4.85□□□□□ -1.63
HMGB3P17-201ENST00000504195 KRTAP10-2P60368 255 aa4.85□□□□□ -1.63
HMGB3P17-201ENST00000504195 CXorf38Q8TB03 319 aa4.85□□□□□ -1.63
HMGB3P17-201ENST00000504195 RTEL1Q9NZ71 1219 aa4.85□□□□□ -1.63
HMGB3P17-201ENST00000504195 SNX11Q9Y5W9 270 aa4.85□□□□□ -1.63
HMGB3P17-201ENST00000504195 ACIN1Q9UKV3 1341 aaKnown RBP4.85□□□□□ -1.63
HMGB3P17-201ENST00000504195 CELA3BP08861 270 aa4.84□□□□□ -1.63
HMGB3P17-201ENST00000504195 MAOBP27338 520 aa4.84□□□□□ -1.63
HMGB3P17-201ENST00000504195 OXCT1P55809 520 aa4.84□□□□□ -1.63
HMGB3P17-201ENST00000504195 NFKB2Q00653 900 aa4.84□□□□□ -1.63
HMGB3P17-201ENST00000504195 SKOR2Q2VWA4 1001 aaPredicted RBP4.84□□□□□ -1.63
HMGB3P17-201ENST00000504195 FAM26DQ5JW98 314 aa4.84□□□□□ -1.63
HMGB3P17-201ENST00000504195 TTC16Q8NEE8 873 aa4.84□□□□□ -1.63
HMGB3P17-201ENST00000504195 KCNN1Q92952 543 aa4.84□□□□□ -1.63
HMGB3P17-201ENST00000504195 CALR3Q96L12 384 aaKnown RBP4.84□□□□□ -1.63
HMGB3P17-201ENST00000504195 SLC26A8Q96RN1 970 aa4.84□□□□□ -1.63
HMGB3P17-201ENST00000504195 OSMRQ99650 979 aa4.84□□□□□ -1.63
HMGB3P17-201ENST00000504195 PIDD1Q9HB75 910 aa4.84□□□□□ -1.63
HMGB3P17-201ENST00000504195 CNTN3Q9P232 1028 aa4.84□□□□□ -1.63
HMGB3P17-201ENST00000504195 RFX1P22670 979 aa4.83□□□□□ -1.64
HMGB3P17-201ENST00000504195 POU4F3Q15319 338 aa4.83□□□□□ -1.64
HMGB3P17-201ENST00000504195 ZXDCQ2QGD7 858 aaPredicted RBP4.83□□□□□ -1.64
HMGB3P17-201ENST00000504195 NUDT16Q96DE0 195 aaKnown RBP4.83□□□□□ -1.64
HMGB3P17-201ENST00000504195 PRIMPOLQ96LW4 560 aa4.83□□□□□ -1.64
HMGB3P17-201ENST00000504195 GSX1Q9H4S2 264 aaPredicted RBP4.83□□□□□ -1.64
HMGB3P17-201ENST00000504195 PLAGL2Q9UPG8 496 aa4.83□□□□□ -1.64
HMGB3P17-201ENST00000504195 U3KQE9 123 aa4.83□□□□□ -1.64
HMGB3P17-201ENST00000504195 EDN3P14138 238 aa4.82□□□□□ -1.64
HMGB3P17-201ENST00000504195 OCLNQ16625 522 aa4.82□□□□□ -1.64
HMGB3P17-201ENST00000504195 C1orf127Q8N9H9 656 aa4.82□□□□□ -1.64
HMGB3P17-201ENST00000504195 CORO1BQ9BR76 489 aa4.82□□□□□ -1.64
HMGB3P17-201ENST00000504195 BHLHE41Q9C0J9 482 aaPredicted RBP4.82□□□□□ -1.64
HMGB3P17-201ENST00000504195 SYNGAP1Q96PV0 1343 aa4.81□□□□□ -1.64
HMGB3P17-201ENST00000504195 PRMT3O60678 531 aa4.81□□□□□ -1.64
HMGB3P17-201ENST00000504195 DDX54Q8TDD1 881 aaKnown RBP4.81□□□□□ -1.64
HMGB3P17-201ENST00000504195 KCNC2Q96PR1 638 aa4.81□□□□□ -1.64
HMGB3P17-201ENST00000504195 ZKSCAN3Q9BRR0 538 aa4.81□□□□□ -1.64
HMGB3P17-201ENST00000504195 NRSN2Q9GZP1 204 aa4.81□□□□□ -1.64
HMGB3P17-201ENST00000504195 TNKS2Q9H2K2 1166 aa4.81□□□□□ -1.64
HMGB3P17-201ENST00000504195 NOVA2Q9UNW9 492 aaKnown RBP4.81□□□□□ -1.64
HMGB3P17-201ENST00000504195 ELOAQ14241 798 aaKnown RBP4.8□□□□□ -1.64
HMGB3P17-201ENST00000504195 PDE3AQ14432 1141 aa4.8□□□□□ -1.64
HMGB3P17-201ENST00000504195 TCERG1LQ5VWI1 586 aa4.8□□□□□ -1.64
HMGB3P17-201ENST00000504195 PROSER2Q86WR7 435 aaPredicted RBP4.8□□□□□ -1.64
HMGB3P17-201ENST00000504195 FNBP4Q8N3X1 1017 aaPredicted RBP4.8□□□□□ -1.64
HMGB3P17-201ENST00000504195 KCNK12Q9HB15 430 aa4.8□□□□□ -1.64
HMGB3P17-201ENST00000504195 CXXC1Q9P0U4 656 aaPredicted RBP4.8□□□□□ -1.64
HMGB3P17-201ENST00000504195 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP4.8□□□□□ -1.64
HMGB3P17-201ENST00000504195 ZBTB39O15060 712 aa4.79□□□□□ -1.64
HMGB3P17-201ENST00000504195 LEFTY1O75610 366 aa4.79□□□□□ -1.64
HMGB3P17-201ENST00000504195 CTSBP07858 339 aa4.79□□□□□ -1.64
HMGB3P17-201ENST00000504195 NAA30Q147X3 362 aaPredicted RBP4.79□□□□□ -1.64
HMGB3P17-201ENST00000504195 OVOL3O00110 214 aa4.78□□□□□ -1.64
HMGB3P17-201ENST00000504195 AOC2O75106 756 aa4.78□□□□□ -1.64
HMGB3P17-201ENST00000504195 SASH1O94885 1247 aa4.78□□□□□ -1.64
HMGB3P17-201ENST00000504195 RAC2P15153 192 aa4.78□□□□□ -1.64
HMGB3P17-201ENST00000504195 GDNFP39905 211 aa4.78□□□□□ -1.64
HMGB3P17-201ENST00000504195 CCDC120Q96HB5 630 aa4.78□□□□□ -1.64
HMGB3P17-201ENST00000504195 MKNK1Q9BUB5 465 aa4.78□□□□□ -1.64
HMGB3P17-201ENST00000504195 DUSP23Q9BVJ7 150 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms