RNA–Protein interactions for RNA: ENST00000502717.5

HMGXB3-201, Transcript of HMG-box containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMGXB3, Length 4,974 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-201ENST00000502717 SBNO1A3KN83 1393 aa19.46■□□□□ 0.71
HMGXB3-201ENST00000502717 PHLPP2Q6ZVD8 1323 aa19.46■□□□□ 0.71
HMGXB3-201ENST00000502717 SLFNL1Q499Z3 407 aa19.46■□□□□ 0.71
HMGXB3-201ENST00000502717 ATP2B2Q01814 1243 aa19.45■□□□□ 0.7
HMGXB3-201ENST00000502717 CHRNA2Q15822 529 aa19.45■□□□□ 0.7
HMGXB3-201ENST00000502717 LDHAL6AQ6ZMR3 332 aa19.45■□□□□ 0.7
HMGXB3-201ENST00000502717 ANKRD18AQ8IVF6 992 aa19.45■□□□□ 0.7
HMGXB3-201ENST00000502717 IP6K1Q92551 441 aa19.45■□□□□ 0.7
HMGXB3-201ENST00000502717 NSRP1Q9H0G5 558 aaKnown RBP19.45■□□□□ 0.7
HMGXB3-201ENST00000502717 TRPM1Q7Z4N2 1603 aa19.45■□□□□ 0.7
HMGXB3-201ENST00000502717 UQCRFS1P1P0C7P4 283 aa19.45■□□□□ 0.7
HMGXB3-201ENST00000502717 KIF5BP33176 963 aa19.45■□□□□ 0.7
HMGXB3-201ENST00000502717 WHAMMP3Q1A5X7 153 aa19.45■□□□□ 0.7
HMGXB3-201ENST00000502717 ERCC6L2Q5T890 1561 aa19.45■□□□□ 0.7
HMGXB3-201ENST00000502717 GCP02774 474 aa19.45■□□□□ 0.7
HMGXB3-201ENST00000502717 ARHGAP25P42331 645 aa19.45■□□□□ 0.7
HMGXB3-201ENST00000502717 IQUBQ8NA54 791 aa19.45■□□□□ 0.7
HMGXB3-201ENST00000502717 MED4Q9NPJ6 270 aa19.45■□□□□ 0.7
HMGXB3-201ENST00000502717 GOLGA6BA6NDN3 693 aa19.44■□□□□ 0.7
HMGXB3-201ENST00000502717 RPGRQ92834 1020 aaKnown RBP19.44■□□□□ 0.7
HMGXB3-201ENST00000502717 SELENOOQ9BVL4 669 aa19.44■□□□□ 0.7
HMGXB3-201ENST00000502717 RPGRIP1Q96KN7 1286 aa19.44■□□□□ 0.7
HMGXB3-201ENST00000502717 PPFIA1Q13136 1202 aa19.44■□□□□ 0.7
HMGXB3-201ENST00000502717 UNC5CLQ8IV45 518 aa19.44■□□□□ 0.7
HMGXB3-201ENST00000502717 ZNF853P0CG23 659 aa19.44■□□□□ 0.7
HMGXB3-201ENST00000502717 IDEP14735 1019 aa19.44■□□□□ 0.7
HMGXB3-201ENST00000502717 CLCN6P51797 869 aa19.44■□□□□ 0.7
HMGXB3-201ENST00000502717 SEC63Q9UGP8 760 aaKnown RBP19.44■□□□□ 0.7
HMGXB3-201ENST00000502717 MORC2Q9Y6X9 1032 aaPredicted RBP19.44■□□□□ 0.7
HMGXB3-201ENST00000502717 A0A1B0GUA9 196 aa19.43■□□□□ 0.7
HMGXB3-201ENST00000502717 UGGT1Q9NYU2 1555 aa19.43■□□□□ 0.7
HMGXB3-201ENST00000502717 IQGAP3Q86VI3 1631 aa19.43■□□□□ 0.7
HMGXB3-201ENST00000502717 FAM71BQ8TC56 605 aa19.43■□□□□ 0.7
HMGXB3-201ENST00000502717 TTLL12Q14166 644 aaPredicted RBP19.43■□□□□ 0.7
HMGXB3-201ENST00000502717 OTUD7BQ6GQQ9 843 aa19.43■□□□□ 0.7
HMGXB3-201ENST00000502717 CCDC51Q96ER9 411 aa19.43■□□□□ 0.7
HMGXB3-201ENST00000502717 MYCBPQ99417 103 aaPredicted RBP19.43■□□□□ 0.7
HMGXB3-201ENST00000502717 POLR1AO95602 1720 aaPredicted RBP19.43■□□□□ 0.7
HMGXB3-201ENST00000502717 ACTN2P35609 894 aa19.43■□□□□ 0.7
HMGXB3-201ENST00000502717 TNNI3KQ59H18 835 aa19.43■□□□□ 0.7
HMGXB3-201ENST00000502717 EXOC4Q96A65 974 aa19.43■□□□□ 0.7
HMGXB3-201ENST00000502717 ZBTB3Q9H5J0 574 aa19.43■□□□□ 0.7
HMGXB3-201ENST00000502717 EFCC1Q9HA90 598 aa19.43■□□□□ 0.7
HMGXB3-201ENST00000502717 RRP15Q9Y3B9 282 aaKnown RBP19.43■□□□□ 0.7
HMGXB3-201ENST00000502717 FPGT-TNNI3KV9GXZ4 949 aa19.43■□□□□ 0.7
HMGXB3-201ENST00000502717 SHROOM2Q13796 1616 aa19.42■□□□□ 0.7
HMGXB3-201ENST00000502717 PFKFB2O60825 505 aa19.42■□□□□ 0.7
HMGXB3-201ENST00000502717 MYSM1Q5VVJ2 828 aa19.42■□□□□ 0.7
HMGXB3-201ENST00000502717 LRRC27Q9C0I9 530 aa19.42■□□□□ 0.7
HMGXB3-201ENST00000502717 CCT6AP40227 531 aaKnown RBP19.42■□□□□ 0.7
HMGXB3-201ENST00000502717 CPLX4Q7Z7G2 160 aa19.42■□□□□ 0.7
HMGXB3-201ENST00000502717 CCDC155Q8N6L0 562 aa19.42■□□□□ 0.7
HMGXB3-201ENST00000502717 A0A1W2PQ27 194 aa19.42■□□□□ 0.7
HMGXB3-201ENST00000502717 A0A1W2PQ64 194 aa19.42■□□□□ 0.7
HMGXB3-201ENST00000502717 A0A1W2PQD8 194 aa19.42■□□□□ 0.7
HMGXB3-201ENST00000502717 HNRNPH2P55795 449 aaKnown RBP19.42■□□□□ 0.7
HMGXB3-201ENST00000502717 ADCK5Q3MIX3 580 aa19.42■□□□□ 0.7
HMGXB3-201ENST00000502717 STX10O60499 249 aa19.42■□□□□ 0.7
HMGXB3-201ENST00000502717 MAP4K1Q92918 833 aa19.42■□□□□ 0.7
HMGXB3-201ENST00000502717 ZNF287Q9HBT7 754 aa19.42■□□□□ 0.7
HMGXB3-201ENST00000502717 BICDL2A1A5D9 508 aa19.41■□□□□ 0.7
HMGXB3-201ENST00000502717 MAP2K2P36507 400 aa19.41■□□□□ 0.7
HMGXB3-201ENST00000502717 SLC9C2Q5TAH2 1124 aa19.41■□□□□ 0.7
HMGXB3-201ENST00000502717 KBTBD3Q8NAB2 608 aa19.41■□□□□ 0.7
HMGXB3-201ENST00000502717 ZNF274Q96GC6 653 aaPredicted RBP19.41■□□□□ 0.7
HMGXB3-201ENST00000502717 PNMA6AP0CW24 399 aaPredicted RBP19.41■□□□□ 0.7
HMGXB3-201ENST00000502717 SARM1Q6SZW1 724 aa19.41■□□□□ 0.7
HMGXB3-201ENST00000502717 C11orf57Q6ZUT1 292 aaPredicted RBP19.41■□□□□ 0.7
HMGXB3-201ENST00000502717 RSRC1Q96IZ7 334 aaKnown RBP19.41■□□□□ 0.7
HMGXB3-201ENST00000502717 SCLT1Q96NL6 688 aa19.41■□□□□ 0.7
HMGXB3-201ENST00000502717 SYNRGQ9UMZ2 1314 aa19.41■□□□□ 0.7
HMGXB3-201ENST00000502717 PFKFB1P16118 471 aa19.41■□□□□ 0.7
HMGXB3-201ENST00000502717 CMA1P23946 247 aa19.41■□□□□ 0.7
HMGXB3-201ENST00000502717 IFT81Q8WYA0 676 aa19.41■□□□□ 0.7
HMGXB3-201ENST00000502717 ESR2Q92731 530 aa19.41■□□□□ 0.7
HMGXB3-201ENST00000502717 PCDHA7Q9UN72 937 aa19.41■□□□□ 0.7
HMGXB3-201ENST00000502717 TET3O43151 1660 aa19.41■□□□□ 0.7
HMGXB3-201ENST00000502717 DDIT3P35638 169 aa19.41■□□□□ 0.7
HMGXB3-201ENST00000502717 ADKP55263 362 aaKnown RBP19.41■□□□□ 0.7
HMGXB3-201ENST00000502717 POSTNQ15063 836 aa19.41■□□□□ 0.7
HMGXB3-201ENST00000502717 HECW2Q9P2P5 1572 aa19.4■□□□□ 0.7
HMGXB3-201ENST00000502717 POLR2DO15514 142 aaKnown RBP19.4■□□□□ 0.7
HMGXB3-201ENST00000502717 RFC4P35249 363 aa19.4■□□□□ 0.7
HMGXB3-201ENST00000502717 DDX21Q9NR30 783 aaKnown RBP eCLIP19.4■□□□□ 0.7
HMGXB3-201ENST00000502717 TMEM132AQ24JP5 1023 aa19.4■□□□□ 0.7
HMGXB3-201ENST00000502717 WWC3Q9ULE0 1092 aa19.4■□□□□ 0.7
HMGXB3-201ENST00000502717 TNNC1P63316 161 aa19.4■□□□□ 0.7
HMGXB3-201ENST00000502717 CCDC50Q8IVM0 306 aa19.4■□□□□ 0.7
HMGXB3-201ENST00000502717 SEC31AO94979 1220 aaKnown RBP19.39■□□□□ 0.7
HMGXB3-201ENST00000502717 ZSCAN20P17040 1043 aaPredicted RBP19.39■□□□□ 0.7
HMGXB3-201ENST00000502717 VPS16Q9H269 839 aa19.39■□□□□ 0.7
HMGXB3-201ENST00000502717 MMRN2Q9H8L6 949 aa19.39■□□□□ 0.7
HMGXB3-201ENST00000502717 PDE11AQ9HCR9 933 aa19.39■□□□□ 0.7
HMGXB3-201ENST00000502717 NCOA3Q9Y6Q9 1424 aa19.39■□□□□ 0.69
HMGXB3-201ENST00000502717 KRT2P35908 639 aa19.39■□□□□ 0.69
HMGXB3-201ENST00000502717 LONRF2Q1L5Z9 754 aa19.39■□□□□ 0.69
HMGXB3-201ENST00000502717 KRT9P35527 623 aa19.39■□□□□ 0.69
HMGXB3-201ENST00000502717 PRPF4BQ13523 1007 aaKnown RBP19.39■□□□□ 0.69
HMGXB3-201ENST00000502717 ZCRB1Q8TBF4 217 aaKnown RBP19.39■□□□□ 0.69
HMGXB3-201ENST00000502717 TMEM87BQ96K49 555 aa19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms